Download biopax JAR files with dependency
validator-core from group org.biopax.validator (version 5.1.0)
Object model validation and reporting library
Group: org.biopax.validator Artifact: validator-core
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0 downloads
Artifact validator-core
Group org.biopax.validator
Version 5.1.0
Last update 07. August 2023
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 2
Dependencies obo-fetcher, commons-text,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 5.1.0
Last update 07. August 2023
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 2
Dependencies obo-fetcher, commons-text,
There are maybe transitive dependencies!
paxtools-trove from group org.biopax.paxtools (version 5.2.1)
A Trove4j based java collections provider for the paxtools-core BioPAX model.
0 downloads
Artifact paxtools-trove
Group org.biopax.paxtools
Version 5.2.1
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, trove4j,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.2.1
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, trove4j,
There are maybe transitive dependencies!
psimi-converter from group org.biopax.paxtools (version 5.3.0)
To Convert PSI-MI or MITAB v2.5 files to BioPAX.
Group: org.biopax.paxtools Artifact: psimi-converter
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Artifact psimi-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, psimitab,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, psimitab,
There are maybe transitive dependencies!
sbgn-converter from group org.biopax.paxtools (version 5.3.0)
To convert a BioPAX L3 model to SBGN-ML (SBGN PD), and optionally align.
0 downloads
Artifact sbgn-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies paxtools-core, libsbgn, chilay-sbgn,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies paxtools-core, libsbgn, chilay-sbgn,
There are maybe transitive dependencies!
paxtools-core from group org.biopax.paxtools (version 5.3.0)
Paxtools core library includes the BioPAX object model and interfaces, the default implementation
and extras: reflection-based class factories and property editors/accessors, some inverse properties
(e.g., xrefOf, componentOf), traversal and file (I/O) utilities.
0 downloads
Artifact paxtools-core
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies collections-generic, commons-lang3,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies collections-generic, commons-lang3,
There are maybe transitive dependencies!
paxtools-query from group org.biopax.paxtools (version 5.3.0)
BioPAX graph-theoretic querying - for finding paths between molecules,
or identifying molecules that are reachable through specific paths, using the BioPAX pathway data model.
0 downloads
Artifact paxtools-query
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
There are maybe transitive dependencies!
gsea-converter from group org.biopax.paxtools (version 5.3.0)
Converts data to the GESA (.gmt) format.
0 downloads
Artifact gsea-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
There are maybe transitive dependencies!
paxtools-search from group org.biopax.paxtools (version 5.3.0)
BioPAX full-text indexing and searching (Lucene based)
Group: org.biopax.paxtools Artifact: paxtools-search
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0 downloads
Artifact paxtools-search
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 5
Dependencies paxtools-core, lucene-core, lucene-highlighter, lucene-analyzers-common, lucene-queryparser,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 5
Dependencies paxtools-core, lucene-core, lucene-highlighter, lucene-analyzers-common, lucene-queryparser,
There are maybe transitive dependencies!
paxtools-console from group org.biopax.paxtools (version 5.3.0)
Paxtools Console Application and Examples
Group: org.biopax.paxtools Artifact: paxtools-console
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Show all versions Show documentation Show source
1 downloads
Artifact paxtools-console
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 10
Dependencies paxtools-core, psimi-converter, gsea-converter, sbgn-converter, paxtools-query, pattern, normalizer, fluent-hc, httpmime, json-simple,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 10
Dependencies paxtools-core, psimi-converter, gsea-converter, sbgn-converter, paxtools-query, pattern, normalizer, fluent-hc, httpmime, json-simple,
There are maybe transitive dependencies!
json-converter from group org.biopax.paxtools (version 5.3.0)
BioPAX to/from JSON Converters
14 downloads
Artifact json-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies apache-jena-libs, jena, paxtools-core,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies apache-jena-libs, jena, paxtools-core,
There are maybe transitive dependencies!
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