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validator-core from group org.biopax.validator (version 5.1.0)

Object model validation and reporting library

Group: org.biopax.validator Artifact: validator-core
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0 downloads
Artifact validator-core
Group org.biopax.validator
Version 5.1.0
Last update 07. August 2023
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 2
Dependencies obo-fetcher, commons-text,
There are maybe transitive dependencies!

paxtools-trove from group org.biopax.paxtools (version 5.2.1)

A Trove4j based java collections provider for the paxtools-core BioPAX model.

Group: org.biopax.paxtools Artifact: paxtools-trove
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Artifact paxtools-trove
Group org.biopax.paxtools
Version 5.2.1
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, trove4j,
There are maybe transitive dependencies!

psimi-converter from group org.biopax.paxtools (version 5.3.0)

To Convert PSI-MI or MITAB v2.5 files to BioPAX.

Group: org.biopax.paxtools Artifact: psimi-converter
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0 downloads
Artifact psimi-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, psimitab,
There are maybe transitive dependencies!

sbgn-converter from group org.biopax.paxtools (version 5.3.0)

To convert a BioPAX L3 model to SBGN-ML (SBGN PD), and optionally align.

Group: org.biopax.paxtools Artifact: sbgn-converter
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Artifact sbgn-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies paxtools-core, libsbgn, chilay-sbgn,
There are maybe transitive dependencies!

paxtools-core from group org.biopax.paxtools (version 5.3.0)

Paxtools core library includes the BioPAX object model and interfaces, the default implementation and extras: reflection-based class factories and property editors/accessors, some inverse properties (e.g., xrefOf, componentOf), traversal and file (I/O) utilities.

Group: org.biopax.paxtools Artifact: paxtools-core
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0 downloads
Artifact paxtools-core
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies collections-generic, commons-lang3,
There are maybe transitive dependencies!

paxtools-query from group org.biopax.paxtools (version 5.3.0)

BioPAX graph-theoretic querying - for finding paths between molecules, or identifying molecules that are reachable through specific paths, using the BioPAX pathway data model.

Group: org.biopax.paxtools Artifact: paxtools-query
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0 downloads
Artifact paxtools-query
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
There are maybe transitive dependencies!

gsea-converter from group org.biopax.paxtools (version 5.3.0)

Converts data to the GESA (.gmt) format.

Group: org.biopax.paxtools Artifact: gsea-converter
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0 downloads
Artifact gsea-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
There are maybe transitive dependencies!

paxtools-search from group org.biopax.paxtools (version 5.3.0)

BioPAX full-text indexing and searching (Lucene based)

Group: org.biopax.paxtools Artifact: paxtools-search
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0 downloads
Artifact paxtools-search
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 5
Dependencies paxtools-core, lucene-core, lucene-highlighter, lucene-analyzers-common, lucene-queryparser,
There are maybe transitive dependencies!

paxtools-console from group org.biopax.paxtools (version 5.3.0)

Paxtools Console Application and Examples

Group: org.biopax.paxtools Artifact: paxtools-console
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1 downloads
Artifact paxtools-console
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 10
Dependencies paxtools-core, psimi-converter, gsea-converter, sbgn-converter, paxtools-query, pattern, normalizer, fluent-hc, httpmime, json-simple,
There are maybe transitive dependencies!

json-converter from group org.biopax.paxtools (version 5.3.0)

BioPAX to/from JSON Converters

Group: org.biopax.paxtools Artifact: json-converter
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14 downloads
Artifact json-converter
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies apache-jena-libs, jena, paxtools-core,
There are maybe transitive dependencies!



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