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/*
* Copyright (c) 1997 - 2016
* Actelion Pharmaceuticals Ltd.
* Gewerbestrasse 16
* CH-4123 Allschwil, Switzerland
*
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice, this
*    list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
*    this list of conditions and the following disclaimer in the documentation
*    and/or other materials provided with the distribution.
* 3. Neither the name of the the copyright holder nor the
*    names of its contributors may be used to endorse or promote products
*    derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
* ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
* ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
* (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
* LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
* ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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package com.actelion.research.chem.descriptor;

import com.actelion.research.chem.IDCodeParser;
import com.actelion.research.chem.Molecule;
import com.actelion.research.chem.StereoMolecule;

public class DescriptorHelper implements DescriptorConstants {
	
	public static final String TAG_SIMILARITY = "Similarity ";
	
    public static int getDescriptorType(String shortName) {
        DescriptorInfo descriptorInfo = getDescriptorInfo(unifyShortName(shortName));
        return (descriptorInfo == null) ? DESCRIPTOR_TYPE_UNKNOWN
                                        : descriptorInfo.type;
    }

    public static DescriptorInfo getDescriptorInfo(String shortName) {
        for (int i=0; i dh) {
		return TAG_SIMILARITY + dh.getInfo().shortName;
		}

	public static String getTagDescriptorSimilarity(String shortName) {
		return TAG_SIMILARITY + shortName;
		}

	public static String getTagDescriptorSimilarity(SimilarityCalculatorInfo info) {
		return TAG_SIMILARITY + info.shortName;
		}

	public static String getTagDescriptorSimilarity(DescriptorInfo dh){
		return TAG_SIMILARITY + dh.shortName;
		}

	public static T create(DescriptorHandler dh, String idcode){
		IDCodeParser parser = new IDCodeParser();
		StereoMolecule mol = parser.getCompactMolecule(idcode);
		mol.ensureHelperArrays(Molecule.cHelperRings);
		return dh.createDescriptor(mol);
	}

}