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Open Source Chemistry Library
/*
* Copyright (c) 1997 - 2016
* Actelion Pharmaceuticals Ltd.
* Gewerbestrasse 16
* CH-4123 Allschwil, Switzerland
*
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
* 3. Neither the name of the the copyright holder nor the
* names of its contributors may be used to endorse or promote products
* derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
* ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
* ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
* (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
* LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
* ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.actelion.research.calc.histogram;
import java.util.List;
import java.util.Random;
/**
* IntegerHistogram
* @author Modest von Korff
* @version 1.0
* Jun 11, 2013 MvK Start implementation
* Nov 6, 2014 MvK getBinsEquallyDistributed(...) adapted for the case that the range is below the number of bins.
* Jun 09, 2016 improved formatting in toString() method.
*/
public class IntegerHistogram {
public static final int [][] ARR_BINS_EXAMPLE = {{1,2}, {2,3}, {3,4}, {4,5}, {5,6}, {6,8}, {8,10}, {10,20}, {20,50}, {50,100}, {100,1000}};
private int [][] arrBins;
private int [] arrCounts;
public IntegerHistogram(int [][] arrBins) {
this(arrBins, true);
}
public IntegerHistogram(int [][] arrBins, boolean consecutive) {
this.arrBins = arrBins;
arrCounts = new int [arrBins.length];
if(consecutive){
for (int i = 1; i < arrBins.length; i++) {
if(arrBins[i-1][1] != arrBins[i][0]){
throw new RuntimeException("Non consecutive bins!");
}
}
}
}
/**
* Added to the bin where fullfilling the criteria v >= lower bound and v < higher bound.
* @param v
*/
public void add(int v){
for (int i = 0; i < arrBins.length; i++) {
if((v >= arrBins[i][0]) && (v < arrBins[i][1])){
arrCounts[i]++;
}
}
}
public void add(int [] a){
for (int i = 0; i < a.length; i++) {
add(a[i]);
}
}
public void add(List li){
for (int i = 0; i < li.size(); i++) {
add(li.get(i));
}
}
public int getTotalCounts(){
int c = 0;
for (int i = 0; i < arrBins.length; i++) {
c += arrCounts[i];
}
return c;
}
public int [] getBinWithNPercentOfAllCounts(int percent){
int nTotal = getTotalCounts();
int nPercent = (int) (nTotal * (percent/100.0));
int c = 0;
int index = -1;
for (int i = 0; i < arrBins.length; i++) {
c += arrCounts[i];
if(c >= nPercent){
index = i;
break;
}
}
int [] bin = new int [2];
bin[0] = arrBins[index][0];
bin[1] = arrBins[index][1];
return bin;
}
/* (non-Javadoc)
* @see java.lang.Object#toString()
*/
@Override
public String toString() {
String sep = "\t";
int [] arrLenOut = new int [arrCounts.length];
for (int i = 0; i < arrBins.length; i++) {
int max = arrCounts[i];
if(arrBins[i][0]>max){
max = arrBins[i][0];
}
if(arrBins[i][1]>max){
max = arrBins[i][1];
}
String sVal = Integer.toString(max);
arrLenOut[i]=sVal.length()+1;
}
StringBuilder sb = new StringBuilder();
for (int i = 0; i < arrBins.length; i++) {
String s = Integer.toString(arrBins[i][0]);
StringBuilder sb0 = new StringBuilder(s);
while(sb0.length() maxValue-minValue){
rangeBin = 1;
bins = maxValue-minValue + 1;
}
int [][] arr = new int [bins][];
int binStart = minValue;
for (int i = 0; i < bins; i++) {
int binEnd = binStart + rangeBin;
int [] bin = new int [2];
bin[0]=binStart;
bin[1]=binEnd;
binStart = binEnd;
arr[i]=bin;
}
if(arr[arr.length-1][1] <= maxValue){
arr[arr.length-1][1] = maxValue+1;
}
return arr;
}
}