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com.hfg xml, html, svg, and bioinformatics utility library
package com.hfg.bio;
import java.util.List;
//------------------------------------------------------------------------------
/**
Interface for amino acid grouping schemes.
@author J. Alex Taylor, hairyfatguy.com
*/
//------------------------------------------------------------------------------
// com.hfg XML/HTML Coding Library
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
//
// J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com
// [email protected]
//------------------------------------------------------------------------------
public interface AAGroupingScheme extends Comparable
{
//--------------------------------------------------------------------------
public String name();
//--------------------------------------------------------------------------
public List getAAGroups();
//--------------------------------------------------------------------------
public AAGroup getAAGroup(AminoAcid inAA);
//--------------------------------------------------------------------------
public AAGroup getAAGroup(Character inResidue);
}