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package com.hfg.bio.seq.alignment.blast;


//==============================================================================
/**
 Container for BLAST search output.
 
@author J. Alex Taylor, hairyfatguy.com
*/ //============================================================================== // com.hfg XML/HTML Coding Library // // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public // License as published by the Free Software Foundation; either // version 2.1 of the License, or (at your option) any later version. // // This library is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU // Lesser General Public License for more details. // // You should have received a copy of the GNU Lesser General Public // License along with this library; if not, write to the Free Software // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA // // J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com // [email protected] //============================================================================== public class BLAST_Output { private Integer mExitStatus; private String mStdErr; private String mStdOut; private String mExecutedCmd; //########################################################################### // PUBLIC METHODS //########################################################################### //--------------------------------------------------------------------------- public BLAST_Output setExitStatus(Integer inValue) { mExitStatus = inValue; return this; } //--------------------------------------------------------------------------- public Integer getExitStatus() { return mExitStatus; } //--------------------------------------------------------------------------- public BLAST_Output setStdErr(String inValue) { mStdErr = inValue; return this; } //--------------------------------------------------------------------------- public String getStdErr() { return mStdErr; } //--------------------------------------------------------------------------- public BLAST_Output setStdOut(String inValue) { mStdOut = inValue; return this; } //--------------------------------------------------------------------------- public String getStdOut() { return mStdOut; } //--------------------------------------------------------------------------- public BLAST_Output setExecutedCmd(String inValue) { mExecutedCmd = inValue; return this; } //--------------------------------------------------------------------------- public String getExecutedCmd() { return mExecutedCmd; } }




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