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com.hfg xml, html, svg, and bioinformatics utility library
package com.hfg.bio.seq.genomic.assembly;
import java.io.Serializable;
import java.util.Set;
import com.hfg.util.collection.OrderedSet;
//------------------------------------------------------------------------------
/**
* Enumeration of genomic paired assembly comparison types.
*
* @author J. Alex Taylor, hairyfatguy.com
*
*/
//------------------------------------------------------------------------------
// com.hfg XML/HTML Coding Library
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
//
// J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com
// [email protected]
//------------------------------------------------------------------------------
public final class GenomicPairedAssemblyComparison implements Serializable
{
private final String mName;
private final int mIndex;
private static final Set sValues = new OrderedSet<>(3);
public static final GenomicPairedAssemblyComparison IDENTICAL = new GenomicPairedAssemblyComparison("identical");
public static final GenomicPairedAssemblyComparison DIFFERENT = new GenomicPairedAssemblyComparison("different");
public static final GenomicPairedAssemblyComparison NA = new GenomicPairedAssemblyComparison("na");
//###########################################################################
// CONSTRUCTORS
//###########################################################################
//--------------------------------------------------------------------------
private GenomicPairedAssemblyComparison(String inName)
{
mName = inName;
mIndex = sValues.size();
sValues.add(this);
}
//###########################################################################
// PUBLIC METHODS
//###########################################################################
//--------------------------------------------------------------------------
@Override
public final String toString()
{
return mName;
}
//--------------------------------------------------------------------------
public static GenomicPairedAssemblyComparison valueOf(String inValue)
{
GenomicPairedAssemblyComparison outValue = null;
for (GenomicPairedAssemblyComparison value : sValues)
{
if (value.toString().equalsIgnoreCase(inValue))
{
outValue = value;
break;
}
}
return outValue;
}
//--------------------------------------------------------------------------
public static GenomicPairedAssemblyComparison[] values()
{
return sValues.toArray(new GenomicPairedAssemblyComparison[] {});
}
//--------------------------------------------------------------------------
public final String name()
{
return mName;
}
//--------------------------------------------------------------------------
@Override
public final int hashCode()
{
return mIndex;
}
//--------------------------------------------------------------------------
@Override
public final boolean equals(Object inObj)
{
return (inObj instanceof GenomicPairedAssemblyComparison
&& mIndex == ((GenomicPairedAssemblyComparison) inObj).mIndex);
}
//--------------------------------------------------------------------------
/**
* This method is called after de-serialization, allowing the object
* to nominate a replacement object to be used in the output
* graph instead of this object. We don't want multiple objects of each type
* to exist in a target VM, so instances replace themselves with
* local objects.
*/
private Object readResolve()
{
GenomicPairedAssemblyComparison outValue = null;
for (GenomicPairedAssemblyComparison value : sValues)
{
if (mIndex == value.mIndex)
{
outValue = value;
break;
}
}
return outValue;
}
}