edits.seer.internal.rules.IF580.xml Maven / Gradle / Ivy

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Java implemenation of the SEER edits.
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        <rule id="IF580" name="TNM Path N, Reg Nodes Pos - Ed 7 (COC)" tag="N2257" java-path="lines.line" category="inter-field" depends="Behavior_Code_ICD-O-3,Histologic_Type_ICD-O-3,Primary_Site,Regional_Nodes_Positive,TNM_Path_N,Type_of_Reporting_Source,Year_of_Diagnosis">
            <expression><![CDATA[//Skip conditions 1, 2
if (line.dateOfDiagnosisYear == null || line.dateOfDiagnosisYear < '2016' || line.dateOfDiagnosisYear > '2017'
    || line.typeOfReportingSource == '6' || line.typeOfReportingSource == '7')
    return true

//Skip conditions 3, 4
if (line.behaviorCodeIcdO3 == '0' || line.behaviorCodeIcdO3 == '1' || line.tnmPathN == null || line.tnmPathN == '88')
    return true

//Skip conditions 5, 6
if (line.regionalNodesPositive == null || (line.tnmEditionNumber != '07' && line.tnmEditionNumber != 'U7'))
    return true

String hist = line.histologicTypeIcdO3
String chapter = ((Closure)Context.AJCC7CodeLookup16).call(line)

// Exceptions for some chapters
String tnmPathN = line.tnmPathN
if (chapter == '014' && tnmPathN == 'p1C')
    return true
else if ((chapter == '030' || chapter == '052') && tnmPathN == 'p2')
    return true
else if (chapter == '031' && tnmPathN == 'p2C')
    return true
else if (chapter == '032' && tnmPathN == 'p2B')
    return true
else if (chapter == '36A' && (tnmPathN == 'c1' || tnmPathN == 'c2'))
    return true
else if (chapter == '055' && (tnmPathN == 'p3' || tnmPathN == 'p4'))
    return true

if (Functions.matches(tnmPathN, /^.[123].*$/))
    return line.regionalNodesPositive != '00' && line.regionalNodesPositive != '98' && line.regionalNodesPositive != '99'

return true]]></expression>
            <message>TNM Path N and Regional Nodes Positive conflict</message>
            <description><![CDATA[This edit is skipped if any of the following conditions are true:

1. Year of Date of Diagnosis is less than 2016, greater than 2017, blank (unknown), or invalid
2. Case is autopsy only (Type of Reporting Source = 6) or death certificate only (Type of Reporting Source = 7)
3. Behavior Code ICD-O-3 = 0 (benign) or 1 (borderline)
4. TNM Path N is blank or 88
5. Regional Nodes Positive is blank
6. TNM Edition Number is not = 07, U7

At least one positive lymph node is required if TNM Pathologic N is 1 or higher.

If the second character of TNM Path N = 1, 2, or 3, indicating metastasis in at least one lymph node
Then
    Regional Nodes Positive must not = 00 (all nodes examined are negative), 98 (no nodes were examined), 99 (unknown whether nodes are positive)

The following TNM site/histology groups/Path N codes are exceptions to the above and will not generate errors:

Chapter 14: Colon and Rectum (Site: C180,C182-C189,C199,C209 Histology:8000-8152,8154-8231,8243-8245,8247-8248,8250-8576,8940-8950,8980-8981)
  TNM Path N = p1C (tumor deposits)

Chapter 30: Merkel Cell Carcinoma (Site: C440,C442-C449,C510-C512,C518-C519,C600-C602,C608-C609,C632 Histology: 8247)
  TNM Path N = p2 (in transit metastases)

Chapter 31: Melanoma of the Skin (Site: C440-C449,C510-C512,C518-C519,C600-C602,C608-C609,C632 Histology:8720-8790)
  TNM Path N = p2C (satellite nodules)

Chapter 32: Breast
TNM Path N = p2B (clinically detected internal mammary lymph nodes in absence of axillary lymph node metastases)

Chapter 36A: Corpus Uteri Carcinoma
TNM Path N = c1 or c2 (clinical N allowed in path N field)

Chapter 52: Retinoblastoma (Site: C692 Histology 9510-9514)
  TNM Path N = p2 (distant nodes)

Chapter 55: Ocular Adnexal Lymphoma (Site: C441,C690,C695-C696 Histology: 9590-9699,9702-9738,9811-9818,9820-9837)
  TNM Path N = p3 or p4 (codes indicating distant nodes)]]></description>
            <history>
                <event version="SE16-015-01" user="kirbyk" date="2016-05-19" ref="67404">Edit created.</event>
                <event version="SE16-016-01" user="kirbyk" date="2017-01-17" ref="67603">Added skip condition for TNM Edition Number.</event>
                <event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
                <event version="SE18-018-01" user="kirbyk" date="2018-04-27" ref="67773">Added several exception conditions based on AJCC chapter.</event>
                <event version="SE18-018-02" user="schadega" date="2018-05-18" ref="67743">Name change.</event>
                <event version="SE18-018-04" user="kirbyk" date="2018-08-01" ref="67979">Removed exceptions for chapters 16A, 16B, 27, and 28.</event>
                <event version="SE18-018-10" user="kirbyk" date="2018-11-30" ref="68061">Added skip condition for DX Year 2018+.</event>
                <event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
            </history>
        </rule>