de.julielab.genemapper.resources.ncbigene.GeneXmlExtract Maven / Gradle / Ivy

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This project assembles code and files required to build the dictionaries and indexes used by the JCoRe Gene Mapper.

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package de.julielab.genemapper.resources.ncbigene;

public class GeneXmlExtract {

	public String geneId;
	public String summary;
	public EntrezgeneProt entrezgeneProt;
	public String taxId;
	/**
	 * The status of the gene sequence analysis, see https://www.ncbi.nlm.nih.gov/books/NBK3841/#EntrezGene.Summary_2
	 * and https://www.ncbi.nlm.nih.gov/books/NBK21091/table/ch18.T.refseq_status_codes/?report=objectonly.
	 */
	public String refSeqStatus;
	/**
	 * The content of the 'value' attribute of the Gene-track_status element
	 */
	public String geneTrackStatusValue;
	/**
	 * The text content of the Gene-track_status element
	 */
	public String geneTrackStatus;
	/**
	 * The EC number of this gene
	 */
	public String ecNumber;


    @Override
    public String toString() {
        return "GeneXmlExtract{" +
                "geneId='" + geneId + '\'' +
                ", summary='" + summary + '\'' +
                ", entrezgeneProt=" + entrezgeneProt +
                ", taxId='" + taxId + '\'' +
                ", refSeqStatus=" + refSeqStatus +
                '}';
    }
}