eu.interedition.collatex.dekker.legacy.MatchTableSerializer Maven / Gradle / Ivy
/*
* Copyright (c) 2015 The Interedition Development Group.
*
* This file is part of CollateX.
*
* CollateX is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* CollateX is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with CollateX. If not, see .
*/
package eu.interedition.collatex.dekker.legacy;
import eu.interedition.collatex.Token;
import eu.interedition.collatex.dekker.island.Archipelago;
import eu.interedition.collatex.dekker.island.Coordinate;
import eu.interedition.collatex.dekker.island.Island;
import java.util.ArrayList;
/**
* @author Meindert Kroese
* @author Ronald Haentjens Dekker
*/
//TODO: The methods in this class are extracted from the old MatchMatrix class
//TODO: check correctness
public class MatchTableSerializer {
//TODO: rename
private final MatchTable sparseMatrix;
public MatchTableSerializer(MatchTable table) {
this.sparseMatrix = table;
}
public String toHtml() {
StringBuilder result = new StringBuilder("\n \n");
ArrayList colLabels = columnLabels();
for (String cLabel : colLabels) {
result.append("").append(cLabel).append(" ");
}
result.append(" \n");
int colNum = sparseMatrix.columnList().size();
ArrayList rLabels = rowLabels();
int row = 0;
for (String label : rLabels) {
result.append("").append(label).append(" ");
for (int col = 0; col < colNum; col++)
if (sparseMatrix.vertexAt(row, col) != null)
result.append("M ");
else
result.append(" ");
result.append(" \n");
row++;
}
result.append("
");
return result.toString();
}
// arch = preferred matches
public String toHtml(Archipelago arch) {
int mat[] = new int[rowNum()];
for (Island isl : arch.getIslands()) {
for (Coordinate c : isl) {
mat[c.row] = c.column;
}
}
StringBuilder result = new StringBuilder("\n \n");
ArrayList colLabels = columnLabels();
for (String cLabel : colLabels) {
result.append("").append(cLabel).append(" ");
}
result.append(" \n");
ArrayList rLabels = rowLabels();
int row = 0;
for (String label : rLabels) {
result.append("").append(label).append(" ");
if (mat[row] > 0) {
result.append(" ").append("M ");
}
result.append(" \n");
row++;
}
result.append("
");
return result.toString();
}
@Override
public String toString() {
StringBuilder result = new StringBuilder();
ArrayList colLabels = columnLabels();
for (String cLabel : colLabels) {
result.append(" ").append(cLabel);
}
result.append("\n");
int colNum = sparseMatrix.columnList().size();
ArrayList rLabels = rowLabels();
int row = 0;
for (String label : rLabels) {
result.append(label);
for (int col = 0; col < colNum; col++)
result.append(" ").append(sparseMatrix.vertexAt(row++, col) != null);
result.append("\n");
}
return result.toString();
}
public ArrayList rowLabels() {
ArrayList labels = new ArrayList();
for (Token vgv : sparseMatrix.rowList()) {
String token = vgv.toString();
int pos = token.indexOf(":'");
if (pos > -1) {
labels.add(token.substring(pos + 2, token.length() - 2));
}
}
return labels;
}
public ArrayList columnLabels() {
ArrayList labels = new ArrayList();
for (Integer t : sparseMatrix.columnList()) {
String token = t.toString();
int pos = token.indexOf(":'");
if (pos > -1) {
// LOG.debug("token={{}}, pos={}", token, pos);
labels.add(token.substring(pos + 2, token.length() - 1));
}
}
return labels;
}
public int rowNum() {
return rowLabels().size();
}
public int colNum() {
return columnLabels().size();
}
}