dbmigration.i2b2-meta-schema-changelog.xml Maven / Gradle / Ivy
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
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<databaseChangeLog xmlns="http://www.liquibase.org/xml/ns/dbchangelog" xmlns:ext="http://www.liquibase.org/xml/ns/dbchangelog-ext" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.liquibase.org/xml/ns/dbchangelog-ext http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-ext.xsd http://www.liquibase.org/xml/ns/dbchangelog http://www.liquibase.org/xml/ns/dbchangelog/dbchangelog-3.3.xsd">
<property name="date.type" value="DATE" dbms="oracle"/>
<property name="date.type" value="DATETIME" dbms="h2"/>
<property name="date.type" value="DATETIME" dbms="sqlserver"/>
<property name="date.type" value="DATETIME" dbms="postgresql"/>
<changeSet author="arpost" id="META-1">
<createTable tableName="EK_MODIFIER_INTERP">
<column name="DECLARING_CONCEPT" type="VARCHAR(50)">
<constraints nullable="false"/>
</column>
<column name="C_BASECODE" type="VARCHAR(50)">
<constraints nullable="false"/>
</column>
<column name="PROPERTYNAME" type="VARCHAR(255)">
<constraints nullable="false"/>
</column>
<column name="DISPLAYNAME" type="VARCHAR(255)"/>
</createTable>
</changeSet>
<changeSet author="arpost" id="META-2" dbms="oracle">
<sql dbms="oracle">
CREATE GLOBAL TEMPORARY TABLE EK_TEMP_UNIQUE_IDS (UNIQUE_ID VARCHAR2(700)) ON COMMIT DELETE ROWS
</sql>
<rollback>
DROP TABLE EK_TEMP_UNIQUE_IDS
</rollback>
</changeSet>
<changeSet author="arpost" id="META-3" dbms="sqlserver">
<sql>
CREATE TABLE ##EK_TEMP_UNIQUE_IDS (UNIQUE_ID VARCHAR(700))
</sql>
<rollback>
DROP TABLE ##EK_TEMP_UNIQUE_IDS
</rollback>
</changeSet>
<changeSet author="arpost" id="META-4">
<createTable tableName="EUREKAPHENOTYPEONTOLOGY">
<column name="C_HLEVEL" type="NUMBER(22, 0)">
<constraints nullable="false"/>
</column>
<column name="C_FULLNAME" type="VARCHAR(700)">
<constraints nullable="false"/>
</column>
<column name="C_NAME" type="VARCHAR(2000)">
<constraints nullable="false"/>
</column>
<column name="C_SYNONYM_CD" type="CHAR(1)">
<constraints nullable="false"/>
</column>
<column name="C_VISUALATTRIBUTES" type="CHAR(3)">
<constraints nullable="false"/>
</column>
<column name="C_TOTALNUM" type="NUMBER(22, 0)"/>
<column name="C_BASECODE" type="VARCHAR(50)"/>
<column name="C_METADATAXML" type="CLOB"/>
<column name="C_FACTTABLECOLUMN" type="VARCHAR(50)">
<constraints nullable="false"/>
</column>
<column name="C_TABLENAME" type="VARCHAR(50)">
<constraints nullable="false"/>
</column>
<column name="C_COLUMNNAME" type="VARCHAR(50)">
<constraints nullable="false"/>
</column>
<column name="C_COLUMNDATATYPE" type="VARCHAR(50)">
<constraints nullable="false"/>
</column>
<column name="C_OPERATOR" type="VARCHAR(10)">
<constraints nullable="false"/>
</column>
<column name="C_DIMCODE" type="VARCHAR(700)">
<constraints nullable="false"/>
</column>
<column name="C_COMMENT" type="CLOB"/>
<column name="C_TOOLTIP" type="VARCHAR(900)"/>
<column name="M_APPLIED_PATH" type="VARCHAR(700)">
<constraints nullable="false"/>
</column>
<column name="UPDATE_DATE" type="${date.type}">
<constraints nullable="false"/>
</column>
<column name="DOWNLOAD_DATE" type="${date.type}"/>
<column name="IMPORT_DATE" type="${date.type}"/>
<column name="SOURCESYSTEM_CD" type="VARCHAR(50)"/>
<column name="VALUETYPE_CD" type="VARCHAR(50)"/>
<column name="M_EXCLUSION_CD" type="VARCHAR(25)"/>
<column name="C_PATH" type="VARCHAR(700)"/>
<column name="C_SYMBOL" type="VARCHAR(50)"/>
</createTable>
</changeSet>
<changeSet author="arpost" id="META-5">
<createIndex indexName="META_APPLIED_PATH_EKPHE_IDX" tableName="EUREKAPHENOTYPEONTOLOGY" unique="false">
<column name="M_APPLIED_PATH"/>
</createIndex>
</changeSet>
<changeSet author="arpost" id="META-6">
<createIndex indexName="META_FULLNAME_EKPHE_IDX" tableName="EUREKAPHENOTYPEONTOLOGY" unique="false">
<column name="C_FULLNAME"/>
</createIndex>
</changeSet>
<changeSet author="arpost" id="META-7">
<createIndex indexName="META_SYMBOL_EKPHE_IDX" tableName="EUREKAPHENOTYPEONTOLOGY" unique="false">
<column name="C_SYMBOL"/>
</createIndex>
</changeSet>
<changeSet author="arpost" id="META-8">
<createIndex indexName="META_PATH_EKPHE_IDX" tableName="EUREKAPHENOTYPEONTOLOGY" unique="false">
<column name="C_PATH"/>
</createIndex>
</changeSet>
<changeSet author="arpost" id="META-9">
<insert tableName="TABLE_ACCESS">
<column name="C_TABLE_CD" value="EUREKAPHENOTYPEONTOLOGY"/>
<column name="C_TABLE_NAME" value="EUREKAPHENOTYPEONTOLOGY"/>
<column name="C_PROTECTED_ACCESS" value="N"/>
<column name="C_HLEVEL" valueNumeric="1"/>
<column name="C_FULLNAME" value="\EK\AIW|Phenotypes\"/>
<column name="C_NAME" value="Phenotypes"/>
<column name="C_SYNONYM_CD" value="N"/>
<column name="C_VISUALATTRIBUTES" value="CA"/>
<column name="C_FACTTABLECOLUMN" value="concept_cd"/>
<column name="C_DIMTABLENAME" value="concept_dimension"/>
<column name="C_COLUMNNAME" value="concept_path"/>
<column name="C_COLUMNDATATYPE" value="T"/>
<column name="C_OPERATOR" value="LIKE"/>
<column name="C_DIMCODE" value="\EK\Phenotypes\"/>
<column name="C_TOOLTIP" value="Phenotypes"/>
<column name="C_STATUS_CD" value="A"/>
</insert>
<rollback>
DELETE FROM TABLE_ACCESS WHERE C_TABLE_CD='EUREKAPHENOTYPEONTOLOGY'
</rollback>
</changeSet>
</databaseChangeLog>
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