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/*
* ----------------------------------------------------------------------------
* This file is part of JSBML. Please visit
* for the latest version of JSBML and more information about SBML.
*
* Copyright (C) 2009-2022 jointly by the following organizations:
* 1. The University of Tuebingen, Germany
* 2. EMBL European Bioinformatics Institute (EBML-EBI), Hinxton, UK
* 3. The California Institute of Technology, Pasadena, CA, USA
* 4. The University of California, San Diego, La Jolla, CA, USA
* 5. The Babraham Institute, Cambridge, UK
*
* This library is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation. A copy of the license agreement is provided
* in the file named "LICENSE.txt" included with this software distribution
* and also available online as .
* ----------------------------------------------------------------------------
*/
package org.sbml.jsbml.ext.spatial;
import java.text.MessageFormat;
import java.util.Map;
import org.apache.log4j.Logger;
import org.sbml.jsbml.PropertyUndefinedError;
import org.sbml.jsbml.xml.parsers.AbstractReaderWriter;
/**
* @author Alex Thomas
* @author Andreas Dräger
* @since 1.0
*/
public class AdvectionCoefficient extends ParameterType {
/**
* A {@link Logger} for this class.
*/
private static final transient Logger logger = Logger.getLogger(AdvectionCoefficient.class);
/**
* Generated serial version identifier.
*/
private static final long serialVersionUID = 8982184068116596444L;
/**
*
*/
private CoordinateKind coordinate;
/**
*
*/
public AdvectionCoefficient() {
super();
}
/**
* @param advCoeff
*/
public AdvectionCoefficient(AdvectionCoefficient advCoeff) {
super(advCoeff);
if (advCoeff.isSetCoordinate()) {
coordinate = advCoeff.getCoordinate();
}
}
/**
* @param level
* @param version
*/
public AdvectionCoefficient(int level, int version) {
super(level, version);
}
@Override
public AdvectionCoefficient clone() {
return new AdvectionCoefficient(this);
}
@Override
public boolean equals(Object object) {
boolean equal = super.equals(object);
if (equal) {
AdvectionCoefficient advCoeff = (AdvectionCoefficient) object;
equal &= advCoeff.isSetCoordinate() == isSetCoordinate();
if (equal && isSetCoordinate()) {
equal &= advCoeff.getCoordinate().equals(getCoordinate());
}
}
return equal;
}
/**
* Returns the value of coordinate
*
* @return the value of coordinate
*/
public CoordinateKind getCoordinate() {
if (isSetCoordinate()) {
return coordinate;
}
// This is necessary if we cannot return null here.
throw new PropertyUndefinedError(SpatialConstants.coordinate, this);
}
/**
* Returns whether coordinate is set
*
* @return whether coordinate is set
*/
public boolean isSetCoordinate() {
return coordinate != null;
}
/**
* Sets the value of coordinate
* @param coordinate
*/
public void setCoordinate(CoordinateKind coordinate) {
CoordinateKind oldCoordinate = this.coordinate;
this.coordinate = coordinate;
firePropertyChange(SpatialConstants.coordinate, oldCoordinate, this.coordinate);
}
/**
* Unsets the variable coordinate
*
* @return {@code true}, if coordinate was set before,
* otherwise {@code false}
*/
public boolean unsetCoordinate() {
if (isSetCoordinate()) {
CoordinateKind oldCoordinate = coordinate;
coordinate = null;
firePropertyChange(SpatialConstants.coordinate, oldCoordinate, coordinate);
return true;
}
return false;
}
@Override
public int hashCode() {
final int prime = 983;//Change this prime number
int hashCode = super.hashCode();
if (isSetCoordinate()) {
hashCode += prime * getCoordinate().hashCode();
}
return hashCode;
}
@Override
public Map writeXMLAttributes() {
Map attributes = super.writeXMLAttributes();
if (isSetCoordinate()) {
attributes.remove("coordinate");
attributes.put(SpatialConstants.shortLabel + ":coordinate", getCoordinate().toString());
}
return attributes;
}
@Override
public boolean readAttribute(String attributeName, String prefix, String value) {
boolean isAttributeRead = super.readAttribute(attributeName, prefix, value);
if (!isAttributeRead) {
isAttributeRead = true;
if (attributeName.equals(SpatialConstants.coordinate)) {
try {
setCoordinate(CoordinateKind.valueOf(value));
} catch (Exception e) {
AbstractReaderWriter.processInvalidAttribute(attributeName, null, value, prefix, this);
logger.warn(MessageFormat.format(
SpatialConstants.bundle.getString("COULD_NOT_READ_ATTRIBUTE"), value, SpatialConstants.coordinate, getElementName()));
}
}
else {
isAttributeRead = false;
}
}
return isAttributeRead;
}
}