webclient.js-i2b2.cells.plugins.standard.Dem1Set.Dem1Set_ctrlr.js Maven / Gradle / Ivy
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Standalone service to to run the AKTIN broker and aggregator
together with an i2b2 query frontend.
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/**
* @projectDescription Displays demographic information for a single patient set.
* @inherits i2b2
* @namespace i2b2.Dem1Set
* @author Nick Benik, Griffin Weber MD PhD
* @version 1.4
* ----------------------------------------------------------------------------------------
* 2008-12-22: Initial Launch [Griffin Weber]
* 2015-10-26: Fixed issue with JSON not working [Mike Mendis]
* 2015-12-30: Fixed missing 'Marital Status' histogram issue (JIRA PLUGINS-10) [Wayne Chan]
*/
i2b2.Dem1Set.Init = function(loadedDiv) {
// register DIV as valid DragDrop target for Patient Record Sets (PRS) objects
var op_trgt = {dropTarget:true};
i2b2.sdx.Master.AttachType("Dem1Set-PRSDROP", "PRS", op_trgt);
// drop event handlers used by this plugin
i2b2.sdx.Master.setHandlerCustom("Dem1Set-PRSDROP", "PRS", "DropHandler", i2b2.Dem1Set.prsDropped);
// manage YUI tabs
this.yuiTabs = new YAHOO.widget.TabView("Dem1Set-TABS", {activeIndex:0});
this.yuiTabs.on('activeTabChange', function(ev) {
//Tabs have changed
if (ev.newValue.get('id')=="Dem1Set-TAB1") {
// user switched to Results tab
if (i2b2.Dem1Set.model.prsRecord) {
// contact PDO only if we have data
if (i2b2.Dem1Set.model.dirtyResultsData) {
// recalculate the results only if the input data has changed
i2b2.Dem1Set.getResults();
}
}
}
});
z = $('anaPluginViewFrame').getHeight() - 34;
$$('DIV#Dem1Set-TABS DIV.Dem1Set-MainContent')[0].style.height = z;
$$('DIV#Dem1Set-TABS DIV.Dem1Set-MainContent')[1].style.height = z;
$$('DIV#Dem1Set-TABS DIV.Dem1Set-MainContent')[2].style.height = z;
};
i2b2.Dem1Set.Unload = function() {
// purge old data
i2b2.Dem1Set.model.prsRecord = false;
return true;
};
i2b2.Dem1Set.prsDropped = function(sdxData) {
sdxData = sdxData[0]; // only interested in first record
// save the info to our local data model
i2b2.Dem1Set.model.prsRecord = sdxData;
// let the user know that the drop was successful by displaying the name of the patient set
$("Dem1Set-PRSDROP").innerHTML = i2b2.h.Escape(sdxData.sdxInfo.sdxDisplayName);
// temporarly change background color to give GUI feedback of a successful drop occuring
$("Dem1Set-PRSDROP").style.background = "#CFB";
setTimeout("$('Dem1Set-PRSDROP').style.background='#DEEBEF'", 250);
// optimization to prevent requerying the hive for new results if the input dataset has not changed
i2b2.Dem1Set.model.dirtyResultsData = true;
};
i2b2.Dem1Set.getResults = function() {
if (i2b2.Dem1Set.model.dirtyResultsData) {
var msg_filter = '\n' +
' \n' +
' '+i2b2.Dem1Set.model.prsRecord.sdxInfo.sdxKeyValue+' \n'+
' \n'+
' \n'+
'\n'+
' \n';
// callback processor
var scopedCallback = new i2b2_scopedCallback();
scopedCallback.scope = this;
scopedCallback.callback = function(results) {
// THIS function is used to process the AJAX results of the getChild call
// results data object contains the following attributes:
// refXML: xmlDomObject <--- for data processing
// msgRequest: xml (string)
// msgResponse: xml (string)
// error: boolean
// errorStatus: string [only with error=true]
// errorMsg: string [only with error=true]
// check for errors
if (results.error) {
alert('The results from the server could not be understood. Press F12 for more information.');
console.error("Bad Results from Cell Communicator: ",results);
return false;
}
$$("DIV#Dem1Set-mainDiv DIV#Dem1Set-TABS DIV.results-working")[0].hide();
$$("DIV#Dem1Set-mainDiv DIV#Dem1Set-TABS DIV.results-finished")[0].show();
// get all the patient records
var pData = i2b2.h.XPath(results.refXML, 'descendant::patient/param[@column]/text()/..');
var hData = new Hash();
for (var i1=0; i19) {v=9;}
if (v==0) {v='0-10';} else {v=v+'0-'+(v+1)+'0';}
}
var t2 = t1.get(v);
if (!t2) {
t2 = 1;
} else {
t2++;
}
t1.set(v, t2);
hData.set(n, t1);
}
// collapse the hash objects to regular objects and save to the Plugin's data model
i2b2.Dem1Set.model.sumCounts = eval("(" + Object.toJSON(hData) +")");
var s = '';
s += '';
s += 'Below are the demographic details for the selected patient set. ';
s += 'For each demographic category, the values, number of patients, and a histogram are shown.';
s += '';
s += '';
s += 'Patient Set:';
s += '' + i2b2.Dem1Set.model.prsRecord.sdxInfo.sdxDisplayName + '';
s += ''
s += '';
s += 'Patient Count:';
s += '' + i2b2.Dem1Set.model.prsRecord.origData.size + '';
s += ''
s += '';
var DemCats = {age_in_years_num:'Age in Years',
sex_cd:'Sex',
race_cd:'Race',
language_cd:'Language',
marital_status_cd:'Marital Status',
religion_cd:'Religion',
vital_status_cd:'Vital Status (Deceased)'
};
for (var DemCat in DemCats) {
var DemCatVals = [];
var maxVal = 0;
for (var DemCatVal in i2b2.Dem1Set.model.sumCounts[DemCat]) {
var tempVal = i2b2.Dem1Set.model.sumCounts[DemCat][DemCatVal];
DemCatVals.push( [DemCatVal, tempVal] );
//if (tempVal > maxVal) {maxVal = tempVal;}
maxVal += tempVal;
}
maxVal *= 1.0;
if (maxVal > 0) {
s += '' + DemCats[DemCat] + '';
s += '';
DemCatVals.sort();
//DemCatVals.sort(function() {return arguments[0][0] > arguments[1][0]});
for (i1=0; i1';
s += '' + DemCatVals[i1][1] + ' ';
s += '
';
}
}
s += '';
s += '
';
$$("DIV#Dem1Set-mainDiv DIV#Dem1Set-TABS DIV.results-finished")[0].innerHTML = s;
// optimization - only requery when the input data is changed
i2b2.Dem1Set.model.dirtyResultsData = false;
}
$$("DIV#Dem1Set-mainDiv DIV#Dem1Set-TABS DIV.results-directions")[0].hide();
$$("DIV#Dem1Set-mainDiv DIV#Dem1Set-TABS DIV.results-finished")[0].hide();
$$("DIV#Dem1Set-mainDiv DIV#Dem1Set-TABS DIV.results-working")[0].show();
// AJAX CALL USING THE EXISTING CRC CELL COMMUNICATOR
i2b2.CRC.ajax.getPDO_fromInputList("Plugin:Dem1Set", {PDO_Request: msg_filter}, scopedCallback);
}
}
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