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A DSL modelled around the UNIX pipe concept, that simplifies writing parallel and scalable pipelines in a portable manner
<?xml version='1.0'?> <!-- ~ Copyright (c) 2013-2015, Centre for Genomic Regulation (CRG). ~ Copyright (c) 2013-2015, Paolo Di Tommaso and the respective authors. ~ ~ This file is part of 'Nextflow'. ~ ~ Nextflow is free software: you can redistribute it and/or modify ~ it under the terms of the GNU General Public License as published by ~ the Free Software Foundation, either version 3 of the License, or ~ (at your option) any later version. ~ ~ Nextflow is distributed in the hope that it will be useful, ~ but WITHOUT ANY WARRANTY; without even the implied warranty of ~ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ~ GNU General Public License for more details. ~ ~ You should have received a copy of the GNU General Public License ~ along with Nextflow. If not, see <http://www.gnu.org/licenses/>. --> <trace enabled="yes" home="/apps/CEPBATOOLS/extrae/2.5.0/impi/64" initial-mode="detail" type="paraver" xml-parser-id="Id: xml-parse.c 2327 2013-11-22 11:47:07Z harald $" > <mpi enabled="yes"> <counters enabled="yes" /> </mpi> <openmp enabled="yes"> <locks enabled="no" /> <counters enabled="yes" /> </openmp> <pthread enabled="yes"> <locks enabled="no" /> <counters enabled="yes" /> </pthread> <callers enabled="yes"> <mpi enabled="yes">1-3</mpi> <sampling enabled="yes">1-5</sampling> </callers> <counters enabled="yes"> <cpu enabled="yes" starting-set-distribution="1"> <set enabled="yes" domain="all"> PAPI_TOT_INS,PAPI_TOT_CYC,PAPI_L1_DCM,PAPI_L2_DCM,PAPI_L3_TCM </set> </cpu> <network enabled="no" /> <resource-usage enabled="no" /> <memory-usage enabled="no" /> </counters> <sampling enabled="no" type="default" period="50m" variability="10m" /> <dynamic-memory enabled="no" /> <input-output enabled="no" /> <merge enabled="no" synchronization="default" tree-fan-out="16" max-memory="512" joint-states="yes" keep-mpits="yes" sort-addresses="yes" overwrite="yes" > $TRACE_NAME$ </merge> </trace>
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