org.bridgedb.rdf.3.1.4.source-code.IdentifiersOrgDataSource.txt Maven / Gradle / Ivy
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2D-PAGE protein 2d-page.protein http://2dbase.techfak.uni-bielefeld.de/cgi-bin/2d/2d.cgi?ac=$id P39172 unknown 1 urn:miriam:2d-page.protein ^([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$
3DMET 3dmet http://www.3dmet.dna.affrc.go.jp/cgi/show_data.php?acc=$id B00162 unknown 1 urn:miriam:3dmet ^B\d{5}$
ABS abs http://genome.crg.es/datasets/abs2005/entries/$id.html A0014 unknown 1 urn:miriam:abs ^A\d+$
Aceview Worm aceview.worm http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/av.cgi?db=worm&c=Gene&l=$id aap-1 unknown 1 urn:miriam:aceview.worm ^[a-z0-9-]+$
Aclame aclame http://aclame.ulb.ac.be/perl/Aclame/Genomes/mge_view.cgi?view=info&id=$id mge:2 unknown 1 urn:miriam:aclame ^mge:\d+$
AERS AERS http://aers.data2semantics.org/resource/drug/$id ADENINE unknown 1
Affy X http://www.affymetrix.com/ https://www.affymetrix.com/LinkServlet?probeset=$id 1851_s_at probe 0 urn:miriam:affy.probeset \d{4,}((_[asx])?_at)? Affymetrix Probeset
AFTOL aftol.taxonomy http://wasabi.lutzonilab.net/pub/displayTaxonInfo?aftol_id=$id 959 unknown 1 urn:miriam:aftol.taxonomy ^\d+$
AGD agd http://agd.vital-it.ch/Ashbya_gossypii/geneview?gene=$id AGR144C unknown 1 urn:miriam:agd ^AGR\w+$
Agilent Ag http://agilent.com A_24_P98555 probe 0 A_\d+_.+ Agilent
Allergome allergome http://www.allergome.org/script/dettaglio.php?id_molecule=$id 1948 unknown 1 urn:miriam:allergome ^\d+$
AmoebaDB amoebadb http://amoebadb.org/amoeba/showRecord.do?name=GeneRecordClasses.GeneRecordClass&source_id=$id EDI_244000 unknown 1 urn:miriam:amoebadb ^EDI_\d+$
Anatomical Therapeutic Chemical atc http://www.whocc.no/atc_ddd_index/?code=$id A10BA02 unknown 1 urn:miriam:atc ^\w(\d+)?(\w{1,2})?(\d+)?$
Anatomical Therapeutic Chemical Vetinary atcvet http://www.whocc.no/atcvet/atcvet_index/?code=$id QJ51RV02 unknown 1 urn:miriam:atcvet ^Q[A-Z0-9]+$
Animal Diversity Web adw http://animaldiversity.ummz.umich.edu/accounts/$id/ Lycalopex_vetulus unknown 1 urn:miriam:adw ^[A-Z_a-z]+$
Animal Genome Cattle QTL cattleqtldb http://www.animalgenome.org/cgi-bin/QTLdb/BT/qdetails?QTL_ID=$id 4685 unknown 1 urn:miriam:cattleqtldb ^\d+$
Animal Genome Chicken QTL chickenqtldb http://www.animalgenome.org/cgi-bin/QTLdb/GG/qdetails?QTL_ID=$id 14362 unknown 1 urn:miriam:chickenqtldb ^\d+$
Animal Genome Pig QTL pigqtldb http://www.animalgenome.org/cgi-bin/QTLdb/SS/qdetails?QTL_ID=$id 14 unknown 1 urn:miriam:pigqtldb ^\d+$
Animal Genome Sheep QTL sheepqtldb http://www.animalgenome.org/cgi-bin/QTLdb/OA/qdetails?QTL_ID=$id 19803 unknown 1 urn:miriam:sheepqtldb ^\d+$
Animal TFDB Family atfdb.family http://www.bioguo.org/AnimalTFDB/family.php?fam=$id CUT unknown 1 urn:miriam:atfdb.family ^\w+$
AntWeb antweb http://www.antweb.org/specimen.do?name=$id casent0106247 unknown 1 urn:miriam:antweb ^casent\d+(\-D\d+)?$
AOP-Wiki KE AopKe https://aopwiki.org/ https://aopwiki.org/events/$id 3 unknown 1 urn:miriam:aop.events ^\d+$ AOP-Wiki Key Events
AOP-Wiki AOP Aop https://aopwiki.org/ https://aopwiki.org/aops/$id 3 pathway 1 urn:miriam:aop ^\d+$ AOP-Wiki Adverse Outcome Pathway
AOP-Wiki KER AopKer https://aopwiki.org/ https://aopwiki.org/relationships/$id 5 interaction 1 urn:miriam:aop.relationships ^\d+$ AOP-Wiki Key Event Relationships
AOP-Wiki Stressor AopS https://aopwiki.org/ https://aopwiki.org/stressors/ 222 metabolite 1 urn:miriam:aop.stressor ^\d+$ AOP-Wiki Stressor
APD apd http://aps.unmc.edu/AP/database/query_output.php?ID=$id 01001 unknown 1 urn:miriam:apd ^\d{5}$
AphidBase Transcript aphidbase.transcript http://isyip.genouest.org/apps/grs-2.2/grs?reportID=aphidbase_transcript_report&objectID=$id ACYPI000159 unknown 1 urn:miriam:aphidbase.transcript ^ACYPI\d{6}(-RA)?$
ArachnoServer arachnoserver http://www.arachnoserver.org/toxincard.html?id=$id AS000060 unknown 1 urn:miriam:arachnoserver ^AS\d{6}$
ArrayExpress arrayexpress http://www.ebi.ac.uk/arrayexpress/experiments/$id E-MEXP-1712 unknown 1 urn:miriam:arrayexpress ^[AEP]-\w{4}-\d+$
ArrayExpress Platform arrayexpress.platform http://www.ebi.ac.uk/arrayexpress/arrays/$id A-GEOD-50 unknown 1 urn:miriam:arrayexpress.platform ^[AEP]-\w{4}-\d+$
arXiv arxiv http://arxiv.org/abs/$id 0807.4956v1 unknown 1 urn:miriam:arxiv ^(\w+(\-\w+)?(\.\w+)?/)?\d{4,7}(\.\d{4}(v\d+)?)?$
ASAP asap http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=$id ABE-0009634 unknown 1 urn:miriam:asap ^[A-Za-z0-9-]+$
AspGD Locus aspgd.locus http://www.aspergillusgenome.org/cgi-bin/locus.pl?dbid=$id ASPL0000349247 unknown 1 urn:miriam:aspgd.locus ^[A-Za-z_0-9]+$
AspGD Protein aspgd.protein http://www.aspergillusgenome.org/cgi-bin/protein/proteinPage.pl?dbid=$id ASPL0000349247 unknown 1 urn:miriam:aspgd.protein ^[A-Za-z_0-9]+$
ATCC atcc http://www.lgcstandards-atcc.org/Products/All/$id.aspx 11303 unknown 1 urn:miriam:atcc ^\d+$
AutDB autdb http://autism.mindspec.org/GeneDetail/$id ADA unknown 1 urn:miriam:autdb ^[A-Z]+[A-Z-0-9]{2,}$
BacMap Biography bacmap.biog http://bacmap.wishartlab.com/organisms/$id 1050 unknown 1 urn:miriam:bacmap.biog ^\d+$
BacMap Map bacmap.map http://bacmap.wishartlab.com/maps/$id/index.html AP011135 unknown 1 urn:miriam:bacmap.map ^\w+(\_)?\d+(\.\d+)?$
BDGP EST bdgp.est http://www.ncbi.nlm.nih.gov/nucest/$id EY223054.1 unknown 1 urn:miriam:bdgp.est ^\w+(\.)?(\d+)?$
BDGP insertion DB bdgp.insertion http://flypush.imgen.bcm.tmc.edu/pscreen/details.php?line=$id KG09531 unknown 1 urn:miriam:bdgp.insertion ^\w+$
BeetleBase beetlebase http://beetlebase.org/cgi-bin/gbrowse/BeetleBase3.gff3/?name=$id TC010103 unknown 1 urn:miriam:beetlebase ^TC\d+$
Bgee family bgee.family http://bgee.unil.ch/bgee/bgee?page=gene_family&action=family_details&gene_family_id=$id ENSFM00500000270089 unknown 1 urn:miriam:bgee.family ^(ENSFM|ENSGTV:)\d+$
Bgee gene bgee.gene http://bgee.unil.ch/bgee/bgee?page=gene&action=summary&gene_id=$id ENSDARG00000013057 unknown 1 urn:miriam:bgee.gene ^(ENS|FBgn)\w+$
Bgee organ bgee.organ http://bgee.unil.ch/bgee/bgee?page=anatomy&action=organ_details&organ_id=$id&organ_children=on EHDAA:2185 unknown 1 urn:miriam:bgee.organ ^(XAO|ZFA|EHDAA|EMAPA|EV|MA)\:\d+$
Bgee stage bgee.stage http://bgee.unil.ch/bgee/bgee?page=anatomy&action=organs&stage_id=$id&stage_children=on HsapDO:0000004 unknown 1 urn:miriam:bgee.stage ^(FBvd|XtroDO|HsapDO|MmusDO)\:\d+$
BIND Bi http://www.bind.ca/ http://www.bind.ca/Action?identifier=bindid&idsearch=$id interaction 1 urn:miriam:bind ^\d+$ BIND
BindingDB bindingDB http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=$id 22360 unknown 1 urn:miriam:bindingDB ^\d+$
BioCarta Pathway biocarta.pathway http://www.biocarta.com/pathfiles/$id.asp h_aktPathway unknown 1 urn:miriam:biocarta.pathway ^([hm]\_)?\w+Pathway$
BioCatalogue biocatalogue.service https://www.biocatalogue.org/services/$id 614 unknown 1 urn:miriam:biocatalogue.service ^\d+$
BioCyc Bc https://biocyc.org https://biocyc.org/getid?id=$id ECOLI:CYT-D-UBIOX-CPLX gene 1 urn:miriam:biocyc ^[A-Z-0-9]+(?© 2015 - 2024 Weber Informatics LLC | Privacy Policy