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A simple meta-classifier that uses a clusterer for classification. For cluster algorithms that use a fixed number of clusterers, like SimpleKMeans, the user has to make sure that the number of clusters to generate are the same as the number of class labels in the dataset in order to obtain a useful model. Note: at prediction time, a missing value is returned if no cluster is found for the instance. The code is based on the 'clusters to classes' functionality of the weka.clusterers.ClusterEvaluation class by Mark Hall.

The Java JDK includes various means of creating/consuming compressed files. What is missing is easy way of creating lazy streamed zip archive, in spirit of java.util.zip.DeflaterInputStream. This implementation relies on the fact that the PKZIP specification allows archiving data streams of sizes not known upfront. This implies that the archives produced will be readable only by tools aware of this trick. Notably, java.util.zip.ZipInputStream is OK with that, so we use it to test compatibility.

The Universal Java Matrix Package (UJMP) is an open source library for dense and sparse matrix computations and linear algebra in Java. In addition to the basic operations like matrix multiplication, matrix inverse or decomposition methods, it also supports visualization, JDBC import/export and many other useful functions such as mean, correlation, standard deviation, mutual information, or the replacement of missing values. It's a swiss army knife for data processing in Java, tailored to machine learning applications.

An instance filter that collapses instances with a common grouping ID value into a single instance. Useful for converting transactional data into a format that Weka's association rule learners can handle. IMPORTANT: assumes that the incoming batch of instances has been sorted on the grouping attribute. The values of nominal attributes are converted to indicator attributes. These can be either binary (with f and t values) or unary with missing values used to indicate absence. The later is Weka's old market basket format, which is useful for Apriori. Numeric attributes can be aggregated within groups by computing the average, sum, minimum or maximum.

Class for building a best-first decision tree classifier. This class uses binary split for both nominal and numeric attributes. For missing values, the method of 'fractional' instances is used. For more information, see: Haijian Shi (2007). Best-first decision tree learning. Hamilton, NZ. Jerome Friedman, Trevor Hastie, Robert Tibshirani (2000). Additive logistic regression : A statistical view of boosting. Annals of statistics. 28(2):337-407.

Implements the stochastic variant of the Pegasos (Primal Estimated sub-GrAdient SOlver for SVM) method of Shalev-Shwartz et al. (2007). This implementation globally replaces all missing values and transforms nominal attributes into binary ones. It also normalizes all attributes, so the coefficients in the output are based on the normalized data. Can either minimize the hinge loss (SVM) or log loss (logistic regression). For more information, see S. Shalev-Shwartz, Y. Singer, N. Srebro: Pegasos: Primal Estimated sub-GrAdient SOlver for SVM. In: 24th International Conference on MachineLearning, 807-814, 2007.

Performs one-class classification on a dataset. Classifier reduces the class being classified to just a single class, and learns the datawithout using any information from other classes. The testing stage will classify as 'target'or 'outlier' - so in order to calculate the outlier pass rate the dataset must contain informationfrom more than one class. Also, the output varies depending on whether the label 'outlier' exists in the instances usedto build the classifier. If so, then 'outlier' will be predicted, if not, then the label willbe considered missing when the prediction does not favour the target class. The 'outlier' classwill not be used to build the model if there are instances of this class in the dataset. It cansimply be used as a flag, you do not need to relabel any classes. For more information, see: Kathryn Hempstalk, Eibe Frank, Ian H. Witten: One-Class Classification by Combining Density and Class Probability Estimation. In: Proceedings of the 12th European Conference on Principles and Practice of Knowledge Discovery in Databases and 19th European Conference on Machine Learning, ECMLPKDD2008, Berlin, 505--519, 2008.

Class for building pace regression linear models and using them for prediction. Under regularity conditions, pace regression is provably optimal when the number of coefficients tends to infinity. It consists of a group of estimators that are either overall optimal or optimal under certain conditions. The current work of the pace regression theory, and therefore also this implementation, do not handle: - missing values - non-binary nominal attributes - the case that n - k is small where n is the number of instances and k is the number of coefficients (the threshold used in this implmentation is 20) For more information see: Wang, Y (2000). A new approach to fitting linear models in high dimensional spaces. Hamilton, New Zealand. Wang, Y., Witten, I. H.: Modeling for optimal probability prediction. In: Proceedings of the Nineteenth International Conference in Machine Learning, Sydney, Australia, 650-657, 2002.