Download JAR files tagged by reader with all dependencies

indexer-reader from group org.apache.maven.indexer (version 7.1.5)

Indexer Reader is a dependency-less library that is able to read published (remote) index with incremental update support, making usable to integrate published Maven Indexes into any engine without depending on maven-indexer-core and its transitive dependencies.

Group: org.apache.maven.indexer Artifact: indexer-reader
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Artifact indexer-reader
Group org.apache.maven.indexer
Version 7.1.5
Last update 11. September 2024
Organization not specified
URL Not specified
License not specified
Dependencies amount 0
Dependencies No dependencies
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jcore-xml-db-reader from group de.julielab (version 2.6.5)

A Collection Reader that converts XML, stored in a database, to CAS objects. The conversion is the same employed by the jcore-xml-reader, making use of the jcore-xml-mapper. The reader requires a configuration file which determines the database connection, the table schema and the PostgreSQL schema (namespace) to use.

Group: de.julielab Artifact: jcore-xml-db-reader
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Artifact jcore-xml-db-reader
Group de.julielab
Version 2.6.5
Last update 23. February 2024
Organization not specified
URL https://github.com/JULIELab/jcore-base/jcore-xml-db-reader
License BSD-2-Clause
Dependencies amount 12
Dependencies jcore-db-reader, costosys, slf4j-api, commons-lang3, guava, jcore-xml-mapper, jcore-utilities, jcore-types, junit-jupiter-engine, jcore-db-test-utilities, assertj-core, jcore-descriptor-creator,
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jcore-xmi-db-writer from group de.julielab (version 2.6.3)

Writes CAS data in XMI format into a relational (PostgreSQL) database. It is possible to write the whole XMI for each document into the database. However, it is also possible to define a list of annotations that should be written into separate tables. The JCoRe XMI Database Reader can then be used to assemble XMI data from a given set of annotations.

Group: de.julielab Artifact: jcore-xmi-db-writer
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Artifact jcore-xmi-db-writer
Group de.julielab
Version 2.6.3
Last update 22. February 2024
Organization not specified
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-xmi-db-writer
License BSD-2-Clause
Dependencies amount 10
Dependencies costosys, jcore-descriptor-creator, jcore-types, uima-ducc-user, jcore-xmi-splitter, commons-codec, jcore-db-checkpoint-ae, jcore-db-test-utilities, assertj-core, annotations,
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jcore-pubmed-db-reader from group de.julielab (version 2.6.1)

An instantiation of the jcore-db-reader that uses the jcore-xml-mapper to retrieve and parse PubMed XML from a PostgreSQL database. The XML format of retrieved documents is expected to follow the PubMed/MEDLINE XML schema that was used beginning from 2017. I.e. the root document of a document must be PubmedArticle and not, as it was for MEDLINE until 2017, MedlineCitation.

Group: de.julielab Artifact: jcore-pubmed-db-reader
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Artifact jcore-pubmed-db-reader
Group de.julielab
Version 2.6.1
Last update 20. February 2024
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-pubmed-db-reader
License BSD-2-Clause
Dependencies amount 3
Dependencies jcore-xml-db-reader, jcore-descriptor-creator, junit-jupiter-engine,
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mrchecker-cli-module from group com.capgemini.mrchecker (version 2023.10.10)

MrChecker CLI Module supports: * Running CLI applications on either Windows or Linux * Reading from the stdout and stderr streams * Writing to the stdin stream * Single run or interactive mode * The stdout stream is watched by a reader thread * The stderr may be optionally watched by a reader thread * Setting up env params

Group: com.capgemini.mrchecker Artifact: mrchecker-cli-module
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Artifact mrchecker-cli-module
Group com.capgemini.mrchecker
Version 2023.10.10
Last update 10. October 2023
Organization Capgemini - Software Solution Center
URL https://github.com/devonfw/devonfw-testing
License The Apache License, Version 2.0
Dependencies amount 1
Dependencies mrchecker-core-module,
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jcore-xml-reader from group de.julielab (version 2.6.1)

A Collection Reader that employs the JCoRe XML mapper to read XML documents. A mapping file must be delivered to determine which XML file elements have to be converted to which CAS annotation types and features. This is the base component for the JCoRe PubMed and Medline readers.

Group: de.julielab Artifact: jcore-xml-reader
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Artifact jcore-xml-reader
Group de.julielab
Version 2.6.1
Last update 18. December 2022
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-xml-reader
License BSD-2-Clause
Dependencies amount 6
Dependencies jcore-xml-mapper, slf4j-api, julielab-java-utilities, uima-ducc-user, assertj-core, junit-jupiter-engine,
There are maybe transitive dependencies!

jcore-medline-db-reader from group de.julielab (version 2.6.0)

An instantiation of the jcore-db-reader that uses the jcore-xml-mapper to retrieve and parse MEDLINE XML from a PostgreSQL database. The XML format of retrieved documents is expected to follow the MEDLINE XML schema that was used until inclusive 2016. I.e. the root element of MEDLINE documents must be MedlineCitation and not, as it is since 2017, PubmedArticle.

Group: de.julielab Artifact: jcore-medline-db-reader
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Artifact jcore-medline-db-reader
Group de.julielab
Version 2.6.0
Last update 18. December 2022
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-pubmed-db-reader
License BSD-2-Clause
Dependencies amount 2
Dependencies jcore-xml-db-reader, jcore-descriptor-creator,
There are maybe transitive dependencies!

jcore-pubmed-reader from group de.julielab (version 2.6.0)

Leveraging the JCoRe XML Reader, this project employs a PubMed-enabled mapping file to map PubMed XML documents to CAS instances. The input is a directory of single XML files, each containing exactly one XML PubmedArticle. The XML format is the one used by NCBI when displaying results in PubMed as XML.

Group: de.julielab Artifact: jcore-pubmed-reader
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Artifact jcore-pubmed-reader
Group de.julielab
Version 2.6.0
Last update 18. December 2022
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-pubmed-reader
License BSD-2-Clause
Dependencies amount 5
Dependencies jcore-xml-reader, logback-classic, jcore-descriptor-creator, jcore-utilities, junit-jupiter-engine,
There are maybe transitive dependencies!

jcore-bionlpgold-pred-gene-merge-ae from group de.julielab (version 2.6.0)

Given the gold BioNLP ST gene mentions and other gene mentions - possibly from gene recognizer - merges the two different sources of genes. For simplicity, this component employs two different types to represent genes. The BioNLP ST reader uses the de.julielab.jcore.types.Gene type. The other genes should be realized with de.julielab.jcore.types.Protein annotations.

Group: de.julielab Artifact: jcore-bionlpgold-pred-gene-merge-ae
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Artifact jcore-bionlpgold-pred-gene-merge-ae
Group de.julielab
Version 2.6.0
Last update 25. November 2022
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-bionlpgold-pred-gene-merge-ae
License BSD 2-Clause
Dependencies amount 5
Dependencies jcore-utilities, slf4j-api, jcore-types, jcore-descriptor-creator, junit-jupiter-engine,
There are maybe transitive dependencies!

jcore-xmi-splitter from group de.julielab (version 2.4.0)

Parses CAS data in XMI format in order to select specified annotations (XmiSplitter) or or builds a single XMI representation out of the base document and the selected annotations (XmiBuilder). These tools are used by the JCoRe CAS to/from DB Reader/Consumer to store or read portions of XMI files from a PostgrSQL database.

Group: de.julielab Artifact: jcore-xmi-splitter
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Artifact jcore-xmi-splitter
Group de.julielab
Version 2.4.0
Last update 17. November 2022
Organization JULIE Lab Jena, Germany
URL Not specified
License BSD-2-Clause
Dependencies amount 11
Dependencies slf4j-api, commons-lang3, testng, uimaj-core, uimafit-core, aalto-xml, woodstox-core, guava, assertj-core, julie-xml-tools, commons-codec,
There are maybe transitive dependencies!

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