water.MemoryManager Maven / Gradle / Ivy
package water;
import java.lang.management.*;
import java.util.Arrays;
import java.util.concurrent.atomic.AtomicLong;
import javax.management.Notification;
import javax.management.NotificationEmitter;
import jsr166y.ForkJoinPool.ManagedBlocker;
import jsr166y.ForkJoinPool;
import water.util.Log;
import water.util.PrettyPrint;
/**
* Manages memory assigned to key/value pairs. All byte arrays used in
* keys/values should be allocated through this class - otherwise we risking
* running out of java memory, and throw unexpected OutOfMemory errors. The
* theory here is that *most* allocated bytes are allocated in large chunks by
* allocating new Values - with large backing arrays. If we intercept these
* allocation points, we cover most Java allocations. If such an allocation
* might trigger an OOM error we first free up some other memory.
*
* MemoryManager monitors memory used by the K/V store (by walking through the
* store (see Cleaner) and overall heap usage by hooking into gc.
*
* Memory is freed if either the cached memory is above the limit or if the
* overall heap usage is too high (in which case we want to use less mem for
* cache). There is also a lower limit on the amount of cache so that we never
* delete all the cache and therefore some computation should always be able to
* progress.
*
* The amount of memory to be freed is determined as the max of cached mem above
* the limit and heap usage above the limit.
*
* One of the primary control inputs is FullGC cycles: we check heap usage and
* set guidance for cache levels. We assume after a FullGC that the heap only
* has POJOs (Plain Old Java Objects, unknown size) and K/V Cached stuff
* (counted by us). We compute the free heap as MEM_MAX-heapUsage (after GC),
* and we compute POJO size as (heapUsage - K/V cache usage).
*
* @author tomas
* @author cliffc
*/
abstract public class MemoryManager {
// max heap memory
public static final long MEM_MAX = Runtime.getRuntime().maxMemory();
// Callbacks from GC
static final HeapUsageMonitor HEAP_USAGE_MONITOR = new HeapUsageMonitor();
// Keep the K/V store below this threshold AND this is the FullGC call-back
// threshold - which is limited in size to the old-gen pool size.
static long MEM_CRITICAL;
// Block allocations?
static volatile boolean CAN_ALLOC = true;
private static volatile boolean MEM_LOW_CRITICAL = false;
// Lock for blocking on allocations
private static Object _lock = new Object();
// A monotonically increasing total count memory allocated via MemoryManager.
// Useful in tracking total memory consumed by algorithms - just ask for the
// before & after amounts and diff them.
static final AtomicLong MEM_ALLOC = new AtomicLong();
static void setMemGood() {
if( CAN_ALLOC ) return;
synchronized(_lock) { CAN_ALLOC = true; _lock.notifyAll(); }
// NO LOGGING UNDER LOCK!
Log.warn("Continuing after swapping");
}
static void setMemLow() {
if( !H2O.ARGS.cleaner ) return; // Cleaner turned off
if( !CAN_ALLOC ) return;
synchronized(_lock) { CAN_ALLOC = false; }
// NO LOGGING UNDER LOCK!
Log.warn("Pausing to swap to disk; more memory may help");
}
static boolean canAlloc() { return CAN_ALLOC; }
static void set_goals( String msg, boolean oom){
set_goals(msg, oom, 0);
}
// Set K/V cache goals.
// Allow (or disallow) allocations.
// Called from the Cleaner, when "cacheUsed" has changed significantly.
// Called from any FullGC notification, and HEAP/POJO_USED changed.
// Called on any OOM allocation
static void set_goals( String msg, boolean oom , long bytes) {
// Our best guess of free memory, as of the last GC cycle
final long heapUsedGC = Cleaner.HEAP_USED_AT_LAST_GC;
final long timeGC = Cleaner.TIME_AT_LAST_GC;
final long freeHeap = MEM_MAX - heapUsedGC;
assert freeHeap >= 0 : "I am really confused about the heap usage; MEM_MAX="+MEM_MAX+" heapUsedGC="+heapUsedGC;
// Current memory held in the K/V store.
final long cacheUsageGC = Cleaner.KV_USED_AT_LAST_GC;
// Our best guess of POJO object usage: Heap_used minus cache used
final long pojoUsedGC = Math.max(heapUsedGC - cacheUsageGC,0);
// Block allocations if:
// the cache is > 7/8 MEM_MAX, OR
// we cannot allocate an equal amount of POJOs, pojoUsedGC > freeHeap.
// Decay POJOS_USED by 1/8th every 5 sec: assume we got hit with a single
// large allocation which is not repeating - so we do not need to have
// double the POJO amount.
// Keep at least 1/8th heap for caching.
// Emergency-clean the cache down to the blocking level.
long d = MEM_CRITICAL; // Block-allocation level; cache can grow till this
// Decay POJO amount
long p = pojoUsedGC;
long age = (System.currentTimeMillis() - timeGC); // Age since last FullGC
age = Math.min(age,10*60*1000 ); // Clip at 10mins
while( (age-=5000) > 0 ) p = p-(p>>3); // Decay effective POJO by 1/8th every 5sec
d -= 2*p - bytes; // Allow for the effective POJO, and again to throttle GC rate (and allow for this allocation)
d = Math.max(d,MEM_MAX>>3); // Keep at least 1/8th heap
if( Cleaner.DESIRED != -1 ) // Set to -1 only for OOM/Cleaner testing. Never negative normally
Cleaner.DESIRED = d; // Desired caching level
final long cacheUsageNow = Cleaner.Histo.cached();
String m="";
if( cacheUsageNow > Cleaner.DESIRED ) {
m = (CAN_ALLOC?"Swapping! ":"blocked: ");
if( oom ) setMemLow(); // Stop allocations; trigger emergency clean
Cleaner.kick_store_cleaner();
} else { // Else we are not *emergency* cleaning, but may be lazily cleaning.
setMemGood(); // Cache is below desired level; unblock allocations
if( oom ) { // But still have an OOM?
m = "Unblock allocations; cache below desired, but also OOM: ";
// Means the heap is full of uncached POJO's - which cannot be spilled.
// Here we enter the zone of possibly dieing for OOM. There's no point
// in blocking allocations, as no more memory can be freed by more
// cache-flushing. Might as well proceed on a "best effort" basis.
} else {
m = "MemGood: "; // Cache is low enough, room for POJO allocation - full steam ahead!
}
}
// No logging if under memory pressure: can deadlock the cleaner thread
String s = m+msg+", (K/V:"+PrettyPrint.bytes(cacheUsageGC)+" + POJO:"+PrettyPrint.bytes(pojoUsedGC)+" + FREE:"+PrettyPrint.bytes(freeHeap)+" == MEM_MAX:"+PrettyPrint.bytes(MEM_MAX)+"), desiredKV="+PrettyPrint.bytes(Cleaner.DESIRED)+(oom?" OOM!":" NO-OOM");
if( CAN_ALLOC ) { if( oom ) Log.warn(s); else Log.debug(s); }
else System.err.println(s);
}
/** Monitors the heap usage after full gc run and tells Cleaner to free memory
* if mem usage is too high. Stops new allocation if mem usage is critical.
* @author tomas */
private static class HeapUsageMonitor implements javax.management.NotificationListener {
MemoryMXBean _allMemBean = ManagementFactory.getMemoryMXBean(); // general
// Determine the OldGen GC pool size - which is saved in MEM_CRITICAL as
// the max desirable K/V store size.
HeapUsageMonitor() {
int c = 0;
for( MemoryPoolMXBean m : ManagementFactory.getMemoryPoolMXBeans() ) {
if( m.getType() != MemoryType.HEAP ) // only interested in HEAP
continue;
if( m.isCollectionUsageThresholdSupported()
&& m.isUsageThresholdSupported()) {
// Really idiotic API: no idea what the usageThreshold is, so I have
// to guess. Start high, catch IAE & lower by 1/8th and try again.
long gc_callback = MEM_MAX;
while( true ) {
try {
m.setCollectionUsageThreshold(gc_callback);
break;
} catch( IllegalArgumentException iae ) {
// Expected IAE: means we used too high a callback level
gc_callback -= (gc_callback>>3);
}
}
m.setCollectionUsageThreshold(1); // Call back for every fullgc
NotificationEmitter emitter = (NotificationEmitter) _allMemBean;
emitter.addNotificationListener(this, null, m);
++c;
MEM_CRITICAL = gc_callback; // Set old-gen heap level
}
}
assert c == 1;
}
/** Callback routine called by JVM after full gc run. Has two functions:
* 1) sets the amount of memory to be cleaned from the cache by the Cleaner
* 2) sets the CAN_ALLOC flag to false if memory level is critical */
@Override public void handleNotification(Notification notification, Object handback) {
String notifType = notification.getType();
if( !notifType.equals(MemoryNotificationInfo.MEMORY_COLLECTION_THRESHOLD_EXCEEDED)) return;
// Memory used after this FullGC
Cleaner.TIME_AT_LAST_GC = System.currentTimeMillis();
Cleaner.HEAP_USED_AT_LAST_GC = _allMemBean.getHeapMemoryUsage().getUsed();
Cleaner.KV_USED_AT_LAST_GC = Cleaner.Histo.cached();
MEM_LOW_CRITICAL = Cleaner.HEAP_USED_AT_LAST_GC > 0.75*MEM_MAX;
Log.debug("GC CALLBACK: "+Cleaner.TIME_AT_LAST_GC+", USED:"+PrettyPrint.bytes(Cleaner.HEAP_USED_AT_LAST_GC)+", CRIT: "+MEM_LOW_CRITICAL);
set_goals("GC CALLBACK",MEM_LOW_CRITICAL);
//if( MEM_LOW_CRITICAL ) { // emergency measure - really low on memory, stop allocations right now!
// setMemLow(); // In-use memory is > 3/4 heap; block allocations
//} else if( Cleaner.HEAP_USED_AT_LAST_GC < (MEM_MAX - (MEM_MAX >> 1)) )
// setMemGood(); // In use memory is < 1/2 heap; allow allocations even if Cleaner is still running
}
}
// Allocates memory with cache management
// Will block until there is enough available memory.
// Catches OutOfMemory, clears cache & retries.
static Object malloc(int elems, long bytes, int type, Object orig, int from ) {
return malloc(elems,bytes,type,orig,from,false);
}
static Object malloc(int elems, long bytes, int type, Object orig, int from , boolean force) {
// Do not assert on large-size here. RF's temp internal datastructures are
// single very large arrays.
//assert bytes < Value.MAX : "malloc size=0x"+Long.toHexString(bytes);
while( true ) {
if( (!MEM_LOW_CRITICAL && !force) && !CAN_ALLOC && // Not allowing allocations?
bytes > 256 && // Allow tiny ones in any case
// To prevent deadlock, we cannot block the cleaner thread in any
// case. This is probably an allocation for logging (ouch! shades of
// logging-induced deadlock!) which will probably be recycled quickly.
!(Thread.currentThread() instanceof Cleaner) ) {
synchronized(_lock) {
try { _lock.wait(300*1000); } catch (InterruptedException ex) { }
}
}
MEM_ALLOC.addAndGet(bytes);
try {
switch( type ) {
case 1: return new byte [elems];
case 2: return new short [elems];
case 4: return new int [elems];
case 8: return new long [elems];
case 5: return new float [elems];
case 9: return new double [elems];
case 0: return new boolean[elems];
case 10: return new Object [elems];
case -1: return Arrays.copyOfRange((byte [])orig,from,elems);
case -4: return Arrays.copyOfRange((int [])orig,from,elems);
case -8: return Arrays.copyOfRange((long [])orig,from,elems);
case -9: return Arrays.copyOfRange((double[])orig,from,elems);
default: throw H2O.fail();
}
}
catch( OutOfMemoryError e ) {
// Do NOT log OutOfMemory, it is expected and unavoidable and handled
// in most cases by spilling to disk.
if( Cleaner.isDiskFull() )
UDPRebooted.suicide(UDPRebooted.T.oom, H2O.SELF);
}
set_goals("OOM",true, bytes); // Low memory; block for swapping
}
}
// Allocates memory with cache management
public static byte [] malloc1 (int size) { return malloc1(size,false); }
public static byte [] malloc1 (int size, boolean force)
{ return (byte [])malloc(size,size*1, 1,null,0,force); }
public static short [] malloc2 (int size) { return (short [])malloc(size,size*2L, 2,null,0); }
public static int [] malloc4 (int size) { return (int [])malloc(size,size*4L, 4,null,0); }
public static long [] malloc8 (int size) { return (long [])malloc(size,size*8L, 8,null,0); }
public static float [] malloc4f(int size) { return (float [])malloc(size,size*4L, 5,null,0); }
public static double [] malloc8d(int size) { return (double [])malloc(size,size*8L, 9,null,0); }
public static boolean[] mallocZ (int size) { return (boolean[])malloc(size,size , 0,null,0); }
public static Object [] mallocObj(int size){ return (Object [])malloc(size,size*8L,10,null,0,false); }
public static byte [] arrayCopyOfRange(byte [] orig, int from, int sz) { return (byte []) malloc(sz,(sz-from) ,-1,orig,from); }
public static int [] arrayCopyOfRange(int [] orig, int from, int sz) { return (int []) malloc(sz,(sz-from)*4,-4,orig,from); }
public static long [] arrayCopyOfRange(long [] orig, int from, int sz) { return (long []) malloc(sz,(sz-from)*8,-8,orig,from); }
public static double [] arrayCopyOfRange(double[] orig, int from, int sz) { return (double[]) malloc(sz,(sz-from)*8,-9,orig,from); }
public static byte [] arrayCopyOf( byte [] orig, int sz) { return arrayCopyOfRange(orig,0,sz); }
public static int [] arrayCopyOf( int [] orig, int sz) { return arrayCopyOfRange(orig,0,sz); }
public static long [] arrayCopyOf( long [] orig, int sz) { return arrayCopyOfRange(orig,0,sz); }
public static double [] arrayCopyOf( double[] orig, int sz) { return arrayCopyOfRange(orig,0,sz); }
// Memory available for tasks (we assume 3/4 of the heap is available for tasks)
static final AtomicLong _taskMem = new AtomicLong(MEM_MAX-(MEM_MAX>>2));
/**
* Try to reserve memory needed for task execution and return true if
* succeeded. Tasks have a shared pool of memory which they should ask for
* in advance before they even try to allocate it.
*
* This method is another backpressure mechanism to make sure we do not
* exhaust system's resources by running too many tasks at the same time.
* Tasks are expected to reserve memory before proceeding with their
* execution and making sure they release it when done.
*
* @param m - requested number of bytes
* @return true if there is enough free memory
*/
static boolean tryReserveTaskMem(long m){
if(!CAN_ALLOC)return false;
if( m == 0 ) return true;
assert m >= 0:"m < 0: " + m;
long current = _taskMem.addAndGet(-m);
if(current < 0){
_taskMem.addAndGet(m);
return false;
}
return true;
}
private static Object _taskMemLock = new Object();
static void reserveTaskMem(long m){
final long bytes = m;
while(!tryReserveTaskMem(bytes)){
try {
ForkJoinPool.managedBlock(new ManagedBlocker() {
@Override public boolean isReleasable() {return _taskMem.get() >= bytes;}
@Override public boolean block() throws InterruptedException {
synchronized(_taskMemLock){
try {_taskMemLock.wait();} catch( InterruptedException e ) {}
}
return isReleasable();
}
});
} catch (InterruptedException e){ Log.throwErr(e); }
}
}
/**
* Free the memory successfully reserved by task.
* @param m
*/
static void freeTaskMem(long m){
if(m == 0)return;
_taskMem.addAndGet(m);
synchronized(_taskMemLock){
_taskMemLock.notifyAll();
}
}
}
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