au.csiro.variantspark.input.FeatureSource.scala Maven / Gradle / Ivy

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Genomic variants interpretation toolkit

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package au.csiro.variantspark.input

import org.apache.spark.mllib.linalg.{Vector, Vectors}
import org.apache.spark.rdd.RDD
import scala.reflect.ClassTag
import au.csiro.variantspark.data.VariableType
import au.csiro.variantspark.data.ContinuousVariable
import au.csiro.variantspark.data.OrdinalVariable
import au.csiro.variantspark.data.Feature

trait FeatureSource {
  def sampleNames: List[String]
  def features: RDD[Feature]
}