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Genomic variants interpretation toolkit
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package au.csiro.variantspark.utils;
import com.google.common.primitives.Ints;
import com.google.common.primitives.Longs;
/**
* A helper class for fast MumMur3 calculation with changing seed based directly on
* [[com.google.common.hash.Murmur3_32HashFunction]] (from guava)
*/
public final class MurMur3Hash {
private static final int C1 = 0xcc9e2d51;
private static final int C2 = 0x1b873593;
public static int hashInt(int input, int seed) {
int k1 = mixK1(input);
int h1 = mixH1(seed, k1);
return fmix(h1, Ints.BYTES);
}
public static int hashLong(long input, int seed) {
int low = (int) input;
int high = (int) (input >>> 32);
int k1 = mixK1(low);
int h1 = mixH1(seed, k1);
k1 = mixK1(high);
h1 = mixH1(h1, k1);
return fmix(h1, Longs.BYTES);
}
private static int mixK1(int k1) {
k1 *= C1;
k1 = Integer.rotateLeft(k1, 15);
k1 *= C2;
return k1;
}
private static int mixH1(int h1, int k1) {
h1 ^= k1;
h1 = Integer.rotateLeft(h1, 13);
h1 = h1 * 5 + 0xe6546b64;
return h1;
}
// Finalization mix - force all bits of a hash block to avalanche
private static int fmix(int h1, int length) {
h1 ^= length;
h1 ^= h1 >>> 16;
h1 *= 0x85ebca6b;
h1 ^= h1 >>> 13;
h1 *= 0xc2b2ae35;
h1 ^= h1 >>> 16;
return h1;
}
}