ca.uhn.hl7v2.util.MessageIterator Maven / Gradle / Ivy
package ca.uhn.hl7v2.util;
import java.util.NoSuchElementException;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import ca.uhn.hl7v2.HL7Exception;
import ca.uhn.hl7v2.model.Group;
import ca.uhn.hl7v2.model.Message;
import ca.uhn.hl7v2.model.Segment;
import ca.uhn.hl7v2.model.Structure;
/**
* Iterates over all defined nodes (ie segments, groups) in a message,
* regardless of whether they have been instantiated previously. This is a
* tricky process, because the number of nodes is infinite, due to infinitely
* repeating segments and groups. See next() for details on
* how this is handled.
*
* This implementation assumes that the first segment in each group is present (as per
* HL7 rules). Specifically, when looking for a segment location, an empty group that has
* a spot for the segment will be overlooked if there is anything else before that spot.
* This may result in surprising (but sensible) behaviour if a message is missing the
* first segment in a group.
*
* @author Bryan Tripp
*/
public class MessageIterator implements java.util.Iterator {
private Structure currentStructure;
private String direction;
private Position next;
private boolean handleUnexpectedSegments;
private static final Logger log = LoggerFactory.getLogger(MessageIterator.class);
/* may add configurability later ...
private boolean findUpToFirstRequired;
private boolean findFirstDescendentsOnly;
public static final String WHOLE_GROUP;
public static final String FIRST_DESCENDENTS_ONLY;
public static final String UP_TO_FIRST_REQUIRED;
*/
/** Creates a new instance of MessageIterator */
public MessageIterator(Structure start, String direction, boolean handleUnexpectedSegments) {
this.currentStructure = start;
this.direction = direction;
this.handleUnexpectedSegments = handleUnexpectedSegments;
}
/* for configurability (maybe to add later, replacing hard-coded options
in nextFromEndOfGroup) ...
public void setSearchLevel(String level) {
if (WHOLE_GROUP.equals(level)) {
this.findUpToFirstRequired = false;
this.findFirstDescendentsOnly = false;
} else if (FIRST_DESCENDENTS_ONLY.equals(level)) {
this.findUpToFirstRequired = false;
this.findFirstDescendentsOnly = true;
} else if (UP_TO_FIRST_REQUIRED.equals(level)) {
this.findUpToFirstRequired = true;
this.findFirstDescendentsOnly = false;
} else {
throw IllegalArgumentException(level + " is not a valid search level. Should be WHOLE_GROUP, etc.");
}
}
public String getSearchLevel() {
String level = WHOLE_GROUP;
if (this.findFirstDescendentsOnly) {
level = FIRST_DESCENDENTS_ONLY;
} else if (this.findUpTpFirstRequired) {
level = UP_TO_FIRST_REQUIRED;
}
return level;
}*/
/**
* Returns true if another object exists in the iteration sequence.
*/
public boolean hasNext() {
boolean has = true;
if (next == null) {
if (Group.class.isAssignableFrom(currentStructure.getClass())) {
groupNext((Group) currentStructure);
} else {
Group parent = currentStructure.getParent();
Index i = getIndex(parent, currentStructure);
Position currentPosition = new Position(parent, i);
try {
if (parent.isRepeating(i.name) && currentStructure.getName().equals(direction)) {
nextRep(currentPosition);
} else {
has = nextPosition(currentPosition, this.direction, this.handleUnexpectedSegments);
}
} catch (HL7Exception e) {
throw new Error("HL7Exception arising from bad index: " + e.getMessage());
}
}
}
log.debug("MessageIterator.hasNext() in direction {}? {}", direction, has);
return has;
}
/**
* Sets next to the first child of the given group (iteration
* always proceeds from group to first child).
*/
private void groupNext(Group current) {
next = new Position(current, current.getNames()[0], 0);
}
/**
* Sets next to the next repetition of the current structure.
*/
private void nextRep(Position current) {
next = new Position(current.parent, current.index.name, current.index.rep + 1);
}
/**
* Sets this.next to the next position in the message (from the given position),
* which could be the next sibling, a new segment, or the next rep
* of the parent. See next() for details.
*/
private boolean nextPosition(Position currPos, String direction, boolean makeNewSegmentIfNeeded) throws HL7Exception {
boolean nextExists = true;
if (isLast(currPos)) {
nextExists = nextFromGroupEnd(currPos, direction, makeNewSegmentIfNeeded);
} else {
nextSibling(currPos);
}
return nextExists;
}
/** Navigates from end of group */
private boolean nextFromGroupEnd(Position currPos, String direction, boolean makeNewSegmentIfNeeded) throws HL7Exception {
assert isLast(currPos);
boolean nextExists = true;
//the following conditional logic is a little convoluted -- its meant as an optimization
// i.e. trying to avoid calling matchExistsAfterCurrentPosition
if (!makeNewSegmentIfNeeded && Message.class.isAssignableFrom(currPos.parent.getClass())) {
nextExists = false;
} else if (!makeNewSegmentIfNeeded || matchExistsAfterPosition(currPos, direction, false, true)) {
Group grandparent = currPos.parent.getParent();
Index parentIndex = getIndex(grandparent, currPos.parent);
Position parentPos = new Position(grandparent, parentIndex);
try {
boolean parentRepeats = parentPos.parent.isRepeating(parentPos.index.name);
if (parentRepeats && contains(parentPos.parent.get(parentPos.index.name, 0), direction, false, true)) {
nextRep(parentPos);
} else {
nextExists = nextPosition(parentPos, direction, makeNewSegmentIfNeeded);
}
} catch (HL7Exception e) {
throw new Error("HL7Exception arising from bad index: " + e.getMessage());
}
} else {
newSegment(currPos.parent, direction);
}
return nextExists;
}
/**
* A match exists for the given name somewhere after the given position (in the
* normal serialization order).
* @param pos the message position after which to look (note that this specifies
* the message instance)
* @param name the name of the structure to look for
* @param firstDescendentsOnly only searches the first children of a group
* @param upToFirstRequired only searches the children of a group up to the first
* required child (normally the first one). This is used when we are parsing
* a message in order and looking for a place to parse a particular segment --
* if the message is correct then it can't go after a required position of a
* different name.
*/
public static boolean matchExistsAfterPosition(Position pos, String name, boolean firstDescendentsOnly, boolean upToFirstRequired) throws HL7Exception {
boolean matchExists = false;
//check next rep of self (if any)
if (pos.parent.isRepeating(pos.index.name)) {
Structure s = pos.parent.get(pos.index.name, pos.index.rep);
matchExists = contains(s, name, firstDescendentsOnly, upToFirstRequired);
}
//check later siblings (if any)
if (!matchExists) {
String[] siblings = pos.parent.getNames();
boolean after = false;
for (int i = 0; i < siblings.length && !matchExists; i++) {
if (after) {
matchExists = contains(pos.parent.get(siblings[i]), name, firstDescendentsOnly, upToFirstRequired);
if (upToFirstRequired && pos.parent.isRequired(siblings[i])) break;
}
if (pos.index.name.equals(siblings[i])) after = true;
}
}
//recurse to parent (if parent is not message root)
if (!matchExists && !Message.class.isAssignableFrom(pos.parent.getClass())) {
Group grandparent = pos.parent.getParent();
Position parentPos = new Position(grandparent, getIndex(grandparent, pos.parent));
matchExists = matchExistsAfterPosition(parentPos, name, firstDescendentsOnly, upToFirstRequired);
}
log.debug("Match exists after position {} for {}? {}", new Object[] {pos, name, matchExists});
return matchExists;
}
/**
* Sets the next position to a new segment of the given name, within the
* given group.
*/
private void newSegment(Group parent, String name) throws HL7Exception {
log.info("MessageIterator creating new segment: {}", name);
parent.addNonstandardSegment(name);
next = new Position(parent, parent.getNames()[parent.getNames().length-1], 0);
}
/**
* Determines whether the given structure matches the given name, or contains
* a child that does.
* @param s the structure to check
* @param name the name to look for
* @param firstDescendentsOnly only checks first descendents (i.e. first
* child, first child of first child, etc.) In theory the first child
* of a group should always be present, and we don't use this method with
* subsequent children because finding the next position within a group is
* straightforward.
* @param upToFirstRequired only checks first descendents and of their siblings
* up to the first required one. This may be needed because in practice
* some first children of groups are not required.
*/
public static boolean contains(Structure s, String name, boolean firstDescendentsOnly, boolean upToFirstRequired) {
boolean contains = false;
if (Segment.class.isAssignableFrom(s.getClass())) {
if (s.getName().equals(name)) contains = true;
} else {
Group g = (Group) s;
String[] names = g.getNames();
for (int i = 0; i < names.length && !contains; i++) {
try {
contains = contains(g.get(names[i], 0), name, firstDescendentsOnly, upToFirstRequired);
if (firstDescendentsOnly) break;
if (upToFirstRequired && g.isRequired(names[i])) break;
} catch (HL7Exception e) {
throw new Error("HL7Exception due to bad index: " + e.getMessage());
}
}
}
return contains;
}
/**
* Tests whether the name of the given Index matches
* the name of the last child of the given group.
*/
public static boolean isLast(Position p) {
String[] names = p.parent.getNames();
return names[names.length-1].equals(p.index.name);
}
/**
* Sets the next location to the next sibling of the given
* index.
*/
private void nextSibling(Position pos) {
String[] names = pos.parent.getNames();
int i = 0;
for (; i < names.length && !names[i].equals(pos.index.name); i++) {}
String nextName = names[i+1];
this.next = new Position(pos.parent, nextName, 0);
}
/**
* Returns the next node in the message. Sometimes the next node is
* ambiguous. For example at the end of a repeating group, the next node
* may be the first segment in the next repetition of the group, or the
* next sibling, or an undeclared segment locally added to the group's end.
* Cases like this are disambiguated using getDirection(), which returns
* the name of the structure that we are "iterating towards".
* Usually we are "iterating towards" a segment of a certain name because we
* have a segment string that we would like to parse into that node.
* Here are the rules:
* - If at a group, next means first child.
* - If at a non-repeating segment, next means next "position"
* - If at a repeating segment: if segment name matches
* direction then next means next rep, otherwise next means next "position".
* - If at a segment within a group (not at the end of the group), next "position"
* means next sibling
* - If at the end of a group: If name of group or any of its "first
* decendents" matches direction, then next position means next rep of group. Otherwise
* if direction matches name of next sibling of the group, or any of its first
* descendents, next position means next sibling of the group. Otherwise, next means a
* new segment added to the group (with a name that matches "direction").
* - "First descendents" means first child, or first child of the first child,
* or first child of the first child of the first child, etc.
*/
public Structure next() {
if (!hasNext()) {
throw new NoSuchElementException("No more nodes in message");
}
try {
this.currentStructure = next.parent.get(next.index.name, next.index.rep);
} catch (HL7Exception e) {
throw new NoSuchElementException("HL7Exception: " + e.getMessage());
}
clearNext();
return this.currentStructure;
}
/** Not supported */
public void remove() {
throw new UnsupportedOperationException("Can't remove a node from a message");
}
public String getDirection() {
return this.direction;
}
public void setDirection(String direction) {
clearNext();
this.direction = direction;
}
private void clearNext() {
next = null;
}
/**
* Returns the index of the given structure as a child of the
* given parent. Returns null if the child isn't found.
*/
public static Index getIndex(Group parent, Structure child) {
Index index = null;
String[] names = parent.getNames();
findChild : for (int i = 0; i < names.length; i++) {
if (names[i].startsWith(child.getName())) {
try {
Structure[] reps = parent.getAll(names[i]);
for (int j = 0; j < reps.length; j++) {
if (child == reps[j]) {
index = new Index(names[i], j);
break findChild;
}
}
} catch (HL7Exception e) {
log.error(e.getMessage(), e);
throw new Error("Internal HL7Exception finding structure index: " + e.getMessage());
}
}
}
return index;
}
/**
* An index of a child structure within a group, consisting of the name and rep of
* of the child.
*/
public static class Index {
public String name;
public int rep;
public Index(String name, int rep) {
this.name = name;
this.rep = rep;
}
/** @see Object#equals */
public boolean equals(Object o) {
boolean equals = false;
if (o != null && o instanceof Index) {
Index i = (Index) o;
if (i.rep == rep && i.name.equals(name)) equals = true;
}
return equals;
}
/** @see Object#hashCode */
public int hashCode() {
return name.hashCode() + 700 * rep;
}
/** @see Object#toString */
public String toString() {
return this.name + ":" + this.rep;
}
}
/**
* A structure position within a message.
*/
public static class Position {
public Group parent;
public Index index;
public Position(Group parent, String name, int rep) {
this.parent = parent;
this.index = new Index(name, rep);
}
public Position(Group parent, Index i) {
this.parent = parent;
this.index = i;
}
/** @see Object#equals */
public boolean equals(Object o) {
boolean equals = false;
if (o != null && o instanceof Position) {
Position p = (Position) o;
if (p.parent.equals(parent) && p.index.equals(index)) equals = true;
}
return equals;
}
/** @see Object#hashCode */
public int hashCode() {
return parent.hashCode() + index.hashCode();
}
public String toString() {
StringBuffer ret = new StringBuffer(parent.getName());
ret.append(":");
ret.append(index.name);
ret.append("(");
ret.append(index.rep);
ret.append(")");
return ret.toString();
}
}
}