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Open Source Chemistry Library
package com.actelion.research.chem.sar;
import com.actelion.research.chem.Molecule;
import com.actelion.research.chem.StereoMolecule;
import java.util.ArrayList;
public class ScaffoldGroup extends ArrayList {
private int mRGroupCount;
private ExitVector[] mExitVector;
protected ScaffoldGroup(StereoMolecule query) {
super();
mRGroupCount = -1;
analyzeExitVectors(query);
}
private void analyzeExitVectors(StereoMolecule query) {
ArrayList evList = new ArrayList<>();
for (int atom=0; atom
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