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package com.actelion.research.chem.sar;

import com.actelion.research.chem.Molecule;
import com.actelion.research.chem.StereoMolecule;

import java.util.ArrayList;

public class ScaffoldGroup extends ArrayList {
	private int mRGroupCount;
	private ExitVector[] mExitVector;

	protected ScaffoldGroup(StereoMolecule query) {
		super();
		mRGroupCount = -1;
		analyzeExitVectors(query);
	}

	private void analyzeExitVectors(StereoMolecule query) {
		ArrayList evList = new ArrayList<>();
		for (int atom=0; atom




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