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/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.commons.math.optimization.fitting;
import org.apache.commons.math.FunctionEvaluationException;
import org.apache.commons.math.exception.util.LocalizedFormats;
import org.apache.commons.math.optimization.DifferentiableMultivariateVectorialOptimizer;
import org.apache.commons.math.optimization.OptimizationException;
import org.apache.commons.math.util.FastMath;
/** This class implements a curve fitting specialized for sinusoids.
* Harmonic fitting is a very simple case of curve fitting. The
* estimated coefficients are the amplitude a, the pulsation ω and
* the phase φ: f (t) = a cos (ω t + φ)
. They are
* searched by a least square estimator initialized with a rough guess
* based on integrals.
* @version $Revision: 1073158 $ $Date: 2011-02-21 22:46:52 +0100 (lun. 21 févr. 2011) $
* @since 2.0
*/
public class HarmonicFitter {
/** Fitter for the coefficients. */
private final CurveFitter fitter;
/** Values for amplitude, pulsation ω and phase φ. */
private double[] parameters;
/** Simple constructor.
* @param optimizer optimizer to use for the fitting
*/
public HarmonicFitter(final DifferentiableMultivariateVectorialOptimizer optimizer) {
this.fitter = new CurveFitter(optimizer);
parameters = null;
}
/** Simple constructor.
* This constructor can be used when a first guess of the
* coefficients is already known.
* @param optimizer optimizer to use for the fitting
* @param initialGuess guessed values for amplitude (index 0),
* pulsation ω (index 1) and phase φ (index 2)
*/
public HarmonicFitter(final DifferentiableMultivariateVectorialOptimizer optimizer,
final double[] initialGuess) {
this.fitter = new CurveFitter(optimizer);
this.parameters = initialGuess.clone();
}
/** Add an observed weighted (x,y) point to the sample.
* @param weight weight of the observed point in the fit
* @param x abscissa of the point
* @param y observed value of the point at x, after fitting we should
* have P(x) as close as possible to this value
*/
public void addObservedPoint(double weight, double x, double y) {
fitter.addObservedPoint(weight, x, y);
}
/** Fit an harmonic function to the observed points.
* @return harmonic function best fitting the observed points
* @throws OptimizationException if the sample is too short or if
* the first guess cannot be computed
*/
public HarmonicFunction fit() throws OptimizationException {
// shall we compute the first guess of the parameters ourselves ?
if (parameters == null) {
final WeightedObservedPoint[] observations = fitter.getObservations();
if (observations.length < 4) {
throw new OptimizationException(LocalizedFormats.INSUFFICIENT_OBSERVED_POINTS_IN_SAMPLE,
observations.length, 4);
}
HarmonicCoefficientsGuesser guesser = new HarmonicCoefficientsGuesser(observations);
guesser.guess();
parameters = new double[] {
guesser.getGuessedAmplitude(),
guesser.getGuessedPulsation(),
guesser.getGuessedPhase()
};
}
try {
double[] fitted = fitter.fit(new ParametricHarmonicFunction(), parameters);
return new HarmonicFunction(fitted[0], fitted[1], fitted[2]);
} catch (FunctionEvaluationException fee) {
// should never happen
throw new RuntimeException(fee);
}
}
/** Parametric harmonic function. */
private static class ParametricHarmonicFunction implements ParametricRealFunction {
/** {@inheritDoc} */
public double value(double x, double[] parameters) {
final double a = parameters[0];
final double omega = parameters[1];
final double phi = parameters[2];
return a * FastMath.cos(omega * x + phi);
}
/** {@inheritDoc} */
public double[] gradient(double x, double[] parameters) {
final double a = parameters[0];
final double omega = parameters[1];
final double phi = parameters[2];
final double alpha = omega * x + phi;
final double cosAlpha = FastMath.cos(alpha);
final double sinAlpha = FastMath.sin(alpha);
return new double[] { cosAlpha, -a * x * sinAlpha, -a * sinAlpha };
}
}
}
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