com.babylonhealth.lit.usbase_java.builders.Diagnosticreport_geneticsBuilder Maven / Gradle / Ivy
package com.babylonhealth.lit.usbase_java.builders;
import java.time.LocalDate;
import java.time.LocalTime;
import java.time.ZonedDateTime;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collections;
import java.util.Optional;
import java.util.UUID;
import java.util.stream.Stream;
import java.util.stream.Collectors;
import scala.math.BigDecimal;
import scala.Option;
import scala.collection.immutable.Seq;
import scala.jdk.javaapi.CollectionConverters;
import scala.jdk.javaapi.OptionConverters;
import lombok.NonNull;
import com.babylonhealth.lit.core.FHIRComponentFieldMeta;
import com.babylonhealth.lit.core.FHIRDateTime;
import com.babylonhealth.lit.core.FHIRDate;
import com.babylonhealth.lit.core.LitSeqJCollector;
import com.babylonhealth.lit.core.LitSeq;
import com.babylonhealth.lit.core.LitSeq$;
import com.babylonhealth.lit.core.NonEmptyLitSeqJCollector;
import com.babylonhealth.lit.core.Choice;
import com.babylonhealth.lit.core.Choice$;
import com.babylonhealth.lit.core.model.*;
import com.babylonhealth.lit.hl7.model.*;
import com.babylonhealth.lit.usbase.model.*;
import com.babylonhealth.lit.core_java.builders.*;
import com.babylonhealth.lit.hl7_java.builders.*;
import com.babylonhealth.lit.usbase_java.builders.*;
import com.babylonhealth.lit.core_java.model.Unions.*;
import com.babylonhealth.lit.hl7_java.model.Unions.*;
import com.babylonhealth.lit.usbase_java.model.Unions.*;
import com.babylonhealth.lit.hl7.DIAGNOSTIC_REPORT_STATUS;
import com.babylonhealth.lit.core.LANGUAGES;
import com.babylonhealth.lit.core.$bslash$div;
import com.babylonhealth.lit.core_java.LitUtils;
import static com.babylonhealth.lit.core_java.LitUtils.autoSuffix;
import static com.babylonhealth.lit.core_java.LitUtils.guard;
import static java.util.stream.Collectors.toList;
public interface Diagnosticreport_geneticsBuilder extends DiagnosticReportBuilder {
public Diagnosticreport_genetics build();
public static Impl init(CodeableConcept code, DIAGNOSTIC_REPORT_STATUS status) {
return new Impl(code, status);
}
public static Impl builder(CodeableConceptBuilder code, DIAGNOSTIC_REPORT_STATUS status) {
return new Impl(code.build(), status);
}
public static ChoiceDateTimeOrPeriod effective(FHIRDateTime f) {
return new ChoiceDateTimeOrPeriod(f);
}
public static ChoiceDateTimeOrPeriod effective(Period p) {
return new ChoiceDateTimeOrPeriod(p);
}
public class Impl implements Diagnosticreport_geneticsBuilder {
private Optional id = Optional.empty();
private Optional meta =
Optional.of(
MetaBuilder.init()
.withProfile("http://hl7.org/fhir/StructureDefinition/diagnosticreport-genetics")
.build());
private Optional text = Optional.empty();
private CodeableConcept code;
private DIAGNOSTIC_REPORT_STATUS status;
private Optional issued = Optional.empty();
private Collection result = Collections.emptyList();
private Collection basedOn = Collections.emptyList();
private Optional subject = Optional.empty();
private Optional language = Optional.empty();
private Collection category = Collections.emptyList();
private Collection specimen = Collections.emptyList();
private Collection contained = Collections.emptyList();
private Collection extension = Collections.emptyList();
private Optional encounter = Optional.empty();
private Collection performer = Collections.emptyList();
private Collection identifier = Collections.emptyList();
private Optional conclusion = Optional.empty();
private Optional effective = Optional.empty();
private Collection imagingStudy = Collections.emptyList();
private Optional implicitRules = Optional.empty();
private Collection presentedForm = Collections.emptyList();
private Collection modifierExtension = Collections.emptyList();
private Collection resultsInterpreter = Collections.emptyList();
private Collection media = Collections.emptyList();
/**
* Required fields for {@link Diagnosticreport_genetics}
*
* @param code - A code or name that describes this diagnostic report.
* @param status - The status of the diagnostic report.
*/
public Impl(CodeableConcept code, DIAGNOSTIC_REPORT_STATUS status) {
this.code = code;
this.status = status;
}
/**
* @param id - The logical id of the resource, as used in the URL for the resource. Once
* assigned, this value never changes.
*/
public Diagnosticreport_geneticsBuilder.Impl withId(@NonNull String id) {
this.id = Optional.of(id);
return this;
}
/**
* @param meta - The metadata about the resource. This is content that is maintained by the
* infrastructure. Changes to the content might not always be associated with version
* changes to the resource.
*/
public Diagnosticreport_geneticsBuilder.Impl withMeta(@NonNull Meta meta) {
this.meta = Optional.of(meta);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withMeta(@NonNull MetaBuilder meta) {
this.meta = Optional.of(meta.build());
return this;
}
/**
* @param text - A human-readable narrative that contains a summary of the resource and can be
* used to represent the content of the resource to a human. The narrative need not encode
* all the structured data, but is required to contain sufficient detail to make it
* "clinically safe" for a human to just read the narrative. Resource definitions may define
* what content should be represented in the narrative to ensure clinical safety.
*/
public Diagnosticreport_geneticsBuilder.Impl withText(@NonNull Narrative text) {
this.text = Optional.of(text);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withText(@NonNull NarrativeBuilder text) {
this.text = Optional.of(text.build());
return this;
}
/**
* @param issued - The date and time that this version of the report was made available to
* providers, typically after the report was reviewed and verified.
*/
public Diagnosticreport_geneticsBuilder.Impl withIssued(@NonNull ZonedDateTime issued) {
this.issued = Optional.of(issued);
return this;
}
/**
* @param result - [Observations](http://hl7.org/fhir/observation.html) that are part of this
* diagnostic report.
*/
public Diagnosticreport_geneticsBuilder.Impl withResult(@NonNull Reference... result) {
this.result = Arrays.asList(result);
return this;
}
/**
* @param result - [Observations](http://hl7.org/fhir/observation.html) that are part of this
* diagnostic report.
*/
public Diagnosticreport_geneticsBuilder.Impl withResult(@NonNull Collection result) {
this.result = Collections.unmodifiableCollection(result);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withResult(@NonNull ReferenceBuilder... result) {
this.result = Arrays.stream(result).map(e -> e.build()).collect(toList());
return this;
}
/** @param basedOn - Details concerning a service requested. */
public Diagnosticreport_geneticsBuilder.Impl withBasedOn(@NonNull Reference... basedOn) {
this.basedOn = Arrays.asList(basedOn);
return this;
}
/** @param basedOn - Details concerning a service requested. */
public Diagnosticreport_geneticsBuilder.Impl withBasedOn(
@NonNull Collection basedOn) {
this.basedOn = Collections.unmodifiableCollection(basedOn);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withBasedOn(@NonNull ReferenceBuilder... basedOn) {
this.basedOn = Arrays.stream(basedOn).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param subject - The subject of the report. Usually, but not always, this is a patient.
* However, diagnostic services also perform analyses on specimens collected from a variety
* of other sources.
*/
public Diagnosticreport_geneticsBuilder.Impl withSubject(@NonNull Reference subject) {
this.subject = Optional.of(subject);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withSubject(@NonNull ReferenceBuilder subject) {
this.subject = Optional.of(subject.build());
return this;
}
/** @param language - The base language in which the resource is written. */
public Diagnosticreport_geneticsBuilder.Impl withLanguage(@NonNull LANGUAGES language) {
this.language = Optional.of(language);
return this;
}
/**
* @param category - A code that classifies the clinical discipline, department or diagnostic
* service that created the report (e.g. cardiology, biochemistry, hematology, MRI). This is
* used for searching, sorting and display purposes.
*/
public Diagnosticreport_geneticsBuilder.Impl withCategory(
@NonNull CodeableConcept... category) {
this.category = Arrays.asList(category);
return this;
}
/**
* @param category - A code that classifies the clinical discipline, department or diagnostic
* service that created the report (e.g. cardiology, biochemistry, hematology, MRI). This is
* used for searching, sorting and display purposes.
*/
public Diagnosticreport_geneticsBuilder.Impl withCategory(
@NonNull Collection category) {
this.category = Collections.unmodifiableCollection(category);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withCategory(
@NonNull CodeableConceptBuilder... category) {
this.category = Arrays.stream(category).map(e -> e.build()).collect(toList());
return this;
}
/** @param specimen - Details about the specimens on which this diagnostic report is based. */
public Diagnosticreport_geneticsBuilder.Impl withSpecimen(@NonNull Reference... specimen) {
this.specimen = Arrays.asList(specimen);
return this;
}
/** @param specimen - Details about the specimens on which this diagnostic report is based. */
public Diagnosticreport_geneticsBuilder.Impl withSpecimen(
@NonNull Collection specimen) {
this.specimen = Collections.unmodifiableCollection(specimen);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withSpecimen(
@NonNull ReferenceBuilder... specimen) {
this.specimen = Arrays.stream(specimen).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param contained - These resources do not have an independent existence apart from the
* resource that contains them - they cannot be identified independently, and nor can they
* have their own independent transaction scope.
*/
public Diagnosticreport_geneticsBuilder.Impl withContained(@NonNull Resource... contained) {
this.contained = Arrays.asList(contained);
return this;
}
/**
* @param contained - These resources do not have an independent existence apart from the
* resource that contains them - they cannot be identified independently, and nor can they
* have their own independent transaction scope.
*/
public Diagnosticreport_geneticsBuilder.Impl withContained(
@NonNull Collection contained) {
this.contained = Collections.unmodifiableCollection(contained);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withContained(
@NonNull ResourceBuilder... contained) {
this.contained = Arrays.stream(contained).map(e -> e.build()).collect(toList());
return this;
}
/** @param extension - An Extension */
public Diagnosticreport_geneticsBuilder.Impl withExtension(@NonNull Extension... extension) {
this.extension = Arrays.asList(extension);
return this;
}
/** @param extension - An Extension */
public Diagnosticreport_geneticsBuilder.Impl withExtension(
@NonNull Collection extension) {
this.extension = Collections.unmodifiableCollection(extension);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withExtension(
@NonNull ExtensionBuilder... extension) {
this.extension = Arrays.stream(extension).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param encounter - The healthcare event (e.g. a patient and healthcare provider interaction)
* which this DiagnosticReport is about.
*/
public Diagnosticreport_geneticsBuilder.Impl withEncounter(@NonNull Reference encounter) {
this.encounter = Optional.of(encounter);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withEncounter(
@NonNull ReferenceBuilder encounter) {
this.encounter = Optional.of(encounter.build());
return this;
}
/** @param performer - The diagnostic service that is responsible for issuing the report. */
public Diagnosticreport_geneticsBuilder.Impl withPerformer(@NonNull Reference... performer) {
this.performer = Arrays.asList(performer);
return this;
}
/** @param performer - The diagnostic service that is responsible for issuing the report. */
public Diagnosticreport_geneticsBuilder.Impl withPerformer(
@NonNull Collection performer) {
this.performer = Collections.unmodifiableCollection(performer);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withPerformer(
@NonNull ReferenceBuilder... performer) {
this.performer = Arrays.stream(performer).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param identifier - Identifiers assigned to this report by the performer or other systems.
*/
public Diagnosticreport_geneticsBuilder.Impl withIdentifier(@NonNull Identifier... identifier) {
this.identifier = Arrays.asList(identifier);
return this;
}
/**
* @param identifier - Identifiers assigned to this report by the performer or other systems.
*/
public Diagnosticreport_geneticsBuilder.Impl withIdentifier(
@NonNull Collection identifier) {
this.identifier = Collections.unmodifiableCollection(identifier);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withIdentifier(
@NonNull IdentifierBuilder... identifier) {
this.identifier = Arrays.stream(identifier).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param conclusion - Concise and clinically contextualized summary conclusion
* (interpretation/impression) of the diagnostic report.
*/
public Diagnosticreport_geneticsBuilder.Impl withConclusion(@NonNull String conclusion) {
this.conclusion = Optional.of(conclusion);
return this;
}
/**
* @param effective - The time or time-period the observed values are related to. When the
* subject of the report is a patient, this is usually either the time of the procedure or
* of specimen collection(s), but very often the source of the date/time is not known, only
* the date/time itself. Field is a 'choice' field. Type should be one of FHIRDateTime,
* Period. To pass the value in, wrap with one of the
* Diagnosticreport_geneticsBuilder.effective static methods
*/
public Diagnosticreport_geneticsBuilder.Impl withEffective(
@NonNull ChoiceDateTimeOrPeriod effective) {
this.effective = Optional.of(effective);
return this;
}
/**
* @param imagingStudy - One or more links to full details of any imaging performed during the
* diagnostic investigation. Typically, this is imaging performed by DICOM enabled
* modalities, but this is not required. A fully enabled PACS viewer can use this
* information to provide views of the source images.
*/
public Diagnosticreport_geneticsBuilder.Impl withImagingStudy(
@NonNull Reference... imagingStudy) {
this.imagingStudy = Arrays.asList(imagingStudy);
return this;
}
/**
* @param imagingStudy - One or more links to full details of any imaging performed during the
* diagnostic investigation. Typically, this is imaging performed by DICOM enabled
* modalities, but this is not required. A fully enabled PACS viewer can use this
* information to provide views of the source images.
*/
public Diagnosticreport_geneticsBuilder.Impl withImagingStudy(
@NonNull Collection imagingStudy) {
this.imagingStudy = Collections.unmodifiableCollection(imagingStudy);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withImagingStudy(
@NonNull ReferenceBuilder... imagingStudy) {
this.imagingStudy = Arrays.stream(imagingStudy).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param implicitRules - A reference to a set of rules that were followed when the resource was
* constructed, and which must be understood when processing the content. Often, this is a
* reference to an implementation guide that defines the special rules along with other
* profiles etc.
*/
public Diagnosticreport_geneticsBuilder.Impl withImplicitRules(@NonNull String implicitRules) {
this.implicitRules = Optional.of(implicitRules);
return this;
}
/**
* @param presentedForm - Rich text representation of the entire result as issued by the
* diagnostic service. Multiple formats are allowed but they SHALL be semantically
* equivalent.
*/
public Diagnosticreport_geneticsBuilder.Impl withPresentedForm(
@NonNull Attachment... presentedForm) {
this.presentedForm = Arrays.asList(presentedForm);
return this;
}
/**
* @param presentedForm - Rich text representation of the entire result as issued by the
* diagnostic service. Multiple formats are allowed but they SHALL be semantically
* equivalent.
*/
public Diagnosticreport_geneticsBuilder.Impl withPresentedForm(
@NonNull Collection presentedForm) {
this.presentedForm = Collections.unmodifiableCollection(presentedForm);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withPresentedForm(
@NonNull AttachmentBuilder... presentedForm) {
this.presentedForm = Arrays.stream(presentedForm).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param modifierExtension - May be used to represent additional information that is not part
* of the basic definition of the resource and that modifies the understanding of the
* element that contains it and/or the understanding of the containing element's
* descendants. Usually modifier elements provide negation or qualification. To make the use
* of extensions safe and manageable, there is a strict set of governance applied to the
* definition and use of extensions. Though any implementer is allowed to define an
* extension, there is a set of requirements that SHALL be met as part of the definition of
* the extension. Applications processing a resource are required to check for modifier
* extensions.
* Modifier extensions SHALL NOT change the meaning of any elements on Resource or
* DomainResource (including cannot change the meaning of modifierExtension itself).
*/
public Diagnosticreport_geneticsBuilder.Impl withModifierExtension(
@NonNull Extension... modifierExtension) {
this.modifierExtension = Arrays.asList(modifierExtension);
return this;
}
/**
* @param modifierExtension - May be used to represent additional information that is not part
* of the basic definition of the resource and that modifies the understanding of the
* element that contains it and/or the understanding of the containing element's
* descendants. Usually modifier elements provide negation or qualification. To make the use
* of extensions safe and manageable, there is a strict set of governance applied to the
* definition and use of extensions. Though any implementer is allowed to define an
* extension, there is a set of requirements that SHALL be met as part of the definition of
* the extension. Applications processing a resource are required to check for modifier
* extensions.
*
Modifier extensions SHALL NOT change the meaning of any elements on Resource or
* DomainResource (including cannot change the meaning of modifierExtension itself).
*/
public Diagnosticreport_geneticsBuilder.Impl withModifierExtension(
@NonNull Collection modifierExtension) {
this.modifierExtension = Collections.unmodifiableCollection(modifierExtension);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withModifierExtension(
@NonNull ExtensionBuilder... modifierExtension) {
this.modifierExtension =
Arrays.stream(modifierExtension).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param resultsInterpreter - The practitioner or organization that is responsible for the
* report's conclusions and interpretations.
*/
public Diagnosticreport_geneticsBuilder.Impl withResultsInterpreter(
@NonNull Reference... resultsInterpreter) {
this.resultsInterpreter = Arrays.asList(resultsInterpreter);
return this;
}
/**
* @param resultsInterpreter - The practitioner or organization that is responsible for the
* report's conclusions and interpretations.
*/
public Diagnosticreport_geneticsBuilder.Impl withResultsInterpreter(
@NonNull Collection resultsInterpreter) {
this.resultsInterpreter = Collections.unmodifiableCollection(resultsInterpreter);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withResultsInterpreter(
@NonNull ReferenceBuilder... resultsInterpreter) {
this.resultsInterpreter =
Arrays.stream(resultsInterpreter).map(e -> e.build()).collect(toList());
return this;
}
/**
* @param media - A list of key images associated with this report. The images are generally
* created during the diagnostic process, and may be directly of the patient, or of treated
* specimens (i.e. slides of interest).
*/
public Diagnosticreport_geneticsBuilder.Impl withMedia(
@NonNull DiagnosticReport.Media... media) {
this.media = Arrays.asList(media);
return this;
}
/**
* @param media - A list of key images associated with this report. The images are generally
* created during the diagnostic process, and may be directly of the patient, or of treated
* specimens (i.e. slides of interest).
*/
public Diagnosticreport_geneticsBuilder.Impl withMedia(
@NonNull Collection media) {
this.media = Collections.unmodifiableCollection(media);
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withMedia(
@NonNull DiagnosticReport_MediaBuilder... media) {
this.media = Arrays.stream(media).map(e -> e.build()).collect(toList());
return this;
}
public Diagnosticreport_geneticsBuilder.Impl withoutMeta() {
this.meta = Optional.empty();
return this;
}
public Diagnosticreport_genetics build() {
return new Diagnosticreport_genetics(
OptionConverters.toScala(id),
OptionConverters.toScala(meta),
OptionConverters.toScala(text),
code,
status,
OptionConverters.toScala(issued),
result.stream().collect(new LitSeqJCollector<>()),
basedOn.stream().collect(new LitSeqJCollector<>()),
OptionConverters.toScala(subject),
OptionConverters.toScala(language),
category.stream().collect(new LitSeqJCollector<>()),
specimen.stream().collect(new LitSeqJCollector<>()),
contained.stream().collect(new LitSeqJCollector<>()),
extension.stream().collect(new LitSeqJCollector<>()),
OptionConverters.toScala(encounter),
performer.stream().collect(new LitSeqJCollector<>()),
identifier.stream().collect(new LitSeqJCollector<>()),
OptionConverters.toScala(conclusion),
(Option) OptionConverters.toScala(effective),
imagingStudy.stream().collect(new LitSeqJCollector<>()),
OptionConverters.toScala(implicitRules),
presentedForm.stream().collect(new LitSeqJCollector<>()),
modifierExtension.stream().collect(new LitSeqJCollector<>()),
resultsInterpreter.stream().collect(new LitSeqJCollector<>()),
media.stream().collect(new LitSeqJCollector<>()),
LitUtils.emptyMetaElMap());
}
}
}