com.bigdata.rdf.sail.RDRHistory Maven / Gradle / Ivy
/**
Copyright (C) SYSTAP, LLC DBA Blazegraph 2006-2016. All rights reserved.
Contact:
SYSTAP, LLC DBA Blazegraph
2501 Calvert ST NW #106
Washington, DC 20008
[email protected]
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; version 2 of the License.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*/
package com.bigdata.rdf.sail;
import java.util.Properties;
import org.apache.log4j.Logger;
import org.openrdf.model.URI;
import org.openrdf.model.impl.URIImpl;
import com.bigdata.rdf.changesets.ChangeAction;
import com.bigdata.rdf.changesets.IChangeLog;
import com.bigdata.rdf.changesets.IChangeRecord;
import com.bigdata.rdf.inf.TruthMaintenance;
import com.bigdata.rdf.internal.IV;
import com.bigdata.rdf.internal.impl.bnode.SidIV;
import com.bigdata.rdf.internal.impl.literal.XSDNumericIV;
import com.bigdata.rdf.model.BigdataValue;
import com.bigdata.rdf.model.BigdataValueFactory;
import com.bigdata.rdf.model.StatementEnum;
import com.bigdata.rdf.spo.ISPO;
import com.bigdata.rdf.spo.SPO;
import com.bigdata.rdf.spo.SPOKeyOrder;
import com.bigdata.rdf.store.AbstractTripleStore;
import com.bigdata.rdf.store.BD;
import com.bigdata.rdf.store.TempTripleStore;
import com.bigdata.relation.accesspath.AbstractArrayBuffer;
import com.bigdata.striterator.ChunkedArrayIterator;
import com.bigdata.striterator.ChunkedResolvingIterator;
import com.bigdata.striterator.IChunkedOrderedIterator;
/**
* This is an experimental feature that captures history using the change log
* mechanism and RDR. For each relevant change event (subclasses can decide
* relevance), a new triple is added to the database, where the subject is the
* original statement, the predicate is the change action (added or removed),
* and the object is the commit time.
*
*
* {@code
* << >> / "commitTime"^^xsd:long .
* }
*
*/
public class RDRHistory implements IChangeLog {
private static final Logger log = Logger.getLogger(RDRHistory.class);
/**
* Vocab terms to use for the "added" and "removed" predicates.
*/
public interface Vocab {
URI ADDED = new URIImpl("blaze:history:added");
URI REMOVED = new URIImpl("blaze:history:removed");
}
/**
* The database.
*/
protected final AbstractTripleStore database;
/**
* The temp store used to hold change records until the commit.
*/
protected TempTripleStore tempStore = null;
/**
* The spo buffer backed by the temp store.
*/
protected Buffer buffer = null;
/**
* IV for the "added" term.
*/
private IV added = null;
/**
* IV for the "removed" term.
*/
private IV removed = null;
/**
* Dummy timestamp to use as change events come in. Will be replaced by
* actual commit time when the transaction is committed.
*/
private IV nullTime = null;
public RDRHistory(final AbstractTripleStore database) {
if (!database.isStatementIdentifiers()) {
throw new IllegalArgumentException("database must be in sids mode");
}
this.database = database;
}
/**
* Give subclasses the opportunity for any initialization, including
* obtaining the IVs for the "added" and "removed" terms.
*/
@SuppressWarnings("rawtypes")
public void init() {
try {
final IV[] ivs = resolveTerms(
new URI[] { Vocab.ADDED, Vocab.REMOVED });
added = ivs[0];
removed = ivs[1];
nullTime = new XSDNumericIV(0l);
} catch (RuntimeException ex) {
throw ex;
} catch (Exception ex) {
throw new RuntimeException(ex);
}
}
/**
* Helper method to resolve added and removed terms.
*/
protected IV[] resolveTerms(final URI[] terms) throws Exception {
final BigdataValueFactory vf = database.getValueFactory();
final BigdataValue[] values = new BigdataValue[terms.length];
for (int i = 0; i < terms.length; i++) {
values[i] = vf.asValue(terms[i]);
}
database.addTerms(values);
final IV[] ivs = new IV[terms.length];
for (int i = 0; i < values.length; i++) {
ivs[i] = values[i].getIV();
}
return ivs;
}
/**
* Stolen from {@link TruthMaintenance#newTempTripleStore()}.
*/
public TempTripleStore newTempTripleStore() {
final Properties properties = database.getProperties();
// // turn off justifications for the tempStore.
// properties.setProperty(Options.JUSTIFY, "false");
// turn off the lexicon since we will only use the statement indices.
properties.setProperty(
com.bigdata.rdf.store.AbstractTripleStore.Options.LEXICON,
"false");
// only keep the SPO index
properties.setProperty(
com.bigdata.rdf.store.AbstractTripleStore.Options.ONE_ACCESS_PATH,
"true");
/*
* @todo MikeP : verify that turning off the bloom filter on the
* temporary triple store is a good idea. we might actually benefit from
* it substantially.
*/
properties.setProperty(
com.bigdata.rdf.store.AbstractTripleStore.Options.BLOOM_FILTER,
"false");
/*
* Turn off history for the temp store.
*/
properties.setProperty(
com.bigdata.rdf.store.AbstractTripleStore.Options.RDR_HISTORY_CLASS,
"");
final TempTripleStore tempStore = new TempTripleStore(database
.getIndexManager().getTempStore(), properties, database);
return tempStore;
}
/**
* Write the change record to the temp store.
*/
@Override
public void changeEvent(final IChangeRecord record) {
if (log.isTraceEnabled()) {
log.trace(record);
}
/*
* Avoid recursion. We do not keep history of the history.
*/
{
final IV p = record.getStatement().p();
if (added.equals(p) || removed.equals(p)) {
return;
}
}
/*
* Give subclasses a chance to decide what history is relevant.
*/
if (!accept(record)) {
return;
}
final ChangeAction action = record.getChangeAction();
if (!(action == ChangeAction.INSERTED ||
action == ChangeAction.REMOVED)) {
/*
* We do not log truth maintenance updates.
*/
return;
}
final IV p = action == ChangeAction.INSERTED ? added : removed;
@SuppressWarnings("rawtypes")
final SidIV sid = new SidIV(record.getStatement());
/*
* Use the null time (0l) until we have the commit time.
*/
final ISPO spo = new SPO(sid, p, nullTime, StatementEnum.Explicit);
if (log.isTraceEnabled()) {
log.trace(spo);
}
/*
* Drop it on the buffer.
*/
getOrCreateBuffer().add(spo);
}
/**
* Subclasses can override this to only record history on certain change
* events.
*
* @param record
* change event
* @return
* true if history should be recorded
*/
protected boolean accept(final IChangeRecord record) {
return true;
}
/**
* Get the buffer, create it if necessary.
*/
protected Buffer getOrCreateBuffer() {
if (buffer == null) {
if (log.isInfoEnabled()) {
log.info("starting rdr history");
}
tempStore = newTempTripleStore();
buffer = new Buffer();
}
return buffer;
}
/**
* Noop.
*/
@Override
public void transactionBegin() {
}
/**
* Noop.
*/
@Override
public void transactionPrepare() {
}
/**
* Copy the statements from the temp store into the database, replacing the
* object position of each statement with the commit time, then close
* out the temp store.
*/
@Override
public void transactionCommited(final long commitTime) {
if (log.isDebugEnabled()) {
log.debug("commit time: " + commitTime);
}
if (buffer == null) {
/*
* Nothing written to the buffer.
*/
return;
}
try {
buffer.flush();
if (log.isDebugEnabled()) {
log.debug("# of adds: " + buffer.counter);
}
final RemoveBuffer removes = new RemoveBuffer();
final IChunkedOrderedIterator it =
tempStore.getAccessPath(SPOKeyOrder.SPO).iterator();
/*
* If we get two SPOs in a row with the same S we know we have two
* change events that cancel each other (add and remove of the same
* thing) and we can remove both from the temp store .
*/
ISPO last = null;
while (it.hasNext()) {
final ISPO curr = it.next();
if (last != null && last.s().equals(curr.s())) {
removes.add(last);
removes.add(curr);
last = null;
} else {
last = curr;
}
}
removes.flush();
if (log.isDebugEnabled()) {
log.debug("# of removes: " + removes.counter);
}
if ((buffer.counter - removes.counter) == 0) {
/*
* Nothing written (net) to the temp store.
*/
return;
}
/*
* This will create an inline IV for the commit time.
*/
final IV timestamp = database.addTerm(
database.getValueFactory().createXSDDateTime(commitTime));
/*
* Copy the temp store into the database, replacing the null time
* term with the commit time along the way.
*/
database.addStatements(new ChunkedResolvingIterator(
tempStore.getAccessPath(SPOKeyOrder.SPO).iterator()) {
/**
* Replace the null time in the object position with the commit
* time.
*/
@Override
protected ISPO resolve(final ISPO spo) {
final ISPO timestamped = new SPO(
spo.s(), spo.p(), timestamp,
StatementEnum.Explicit);
if (log.isTraceEnabled()) {
log.trace(spo);
log.trace(timestamped);
}
return timestamped;
}
}, null);
database.commit();
} finally {
close();
}
}
/**
* Close out the temp store.
*/
@Override
public void transactionAborted() {
close();
}
/**
* Close out the temp store.
*/
@Override
public void close() {
if (tempStore != null) {
if (log.isInfoEnabled()) {
log.info("closing rdr history");
}
tempStore.close();
tempStore = null;
buffer.reset();
buffer = null;
}
}
/**
* SPO buffer backed by the temp store.
*/
private class Buffer extends AbstractArrayBuffer {
/*
* Use a default capacity of 10000.
*/
private static final int capacity = 10000;
private long counter = 0;
public Buffer() {
super(capacity, ISPO.class, null);
}
@Override
protected long flush(final int n, final ISPO[] a) {
final long l = tempStore.addStatements(a, n);
counter += l;
return l;
}
}
/**
* SPO buffer backed by the temp store.
*/
private class RemoveBuffer extends AbstractArrayBuffer {
/*
* Use a default capacity of 10000.
*/
private static final int capacity = 10000;
private long counter = 0;
public RemoveBuffer() {
super(capacity, ISPO.class, null);
}
@Override
protected long flush(final int n, final ISPO[] a) {
final long l = tempStore.removeStatements(
new ChunkedArrayIterator(n, a, null), false);
counter += l;
return l;
}
}
}
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