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Blazegraph Modifications to the DSI utils. This are forked from version 1.10.0 under LGPLv2.1.
package it.unimi.dsi.io;
/*
* DSI utilities
*
* Copyright (C) 2005-2009 Sebastiano Vigna
*
* This library is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by the Free
* Software Foundation; either version 2.1 of the License, or (at your option)
* any later version.
*
* This library is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
* or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License
* for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
*
*/
import it.unimi.dsi.Util;
import it.unimi.dsi.fastutil.io.FastBufferedInputStream;
import it.unimi.dsi.fastutil.io.FastBufferedOutputStream;
import it.unimi.dsi.fastutil.objects.AbstractObjectIterator;
import java.io.DataInputStream;
import java.io.DataOutputStream;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileOutputStream;
import java.io.IOException;
import java.util.NoSuchElementException;
import org.apache.log4j.Logger;
/** An iterable that offers elements that were previously stored offline using specialized
* serialization methods. At construction, you provide a {@linkplain #OfflineIterable(it.unimi.dsi.io.OfflineIterable.Serializer, Object) serializer}
* that establishes how elements are written offline; after that, you can
* {@linkplain #add(Object) add elements} one at a time or in a {@linkplain #addAll(Iterable) bulk way}.
* At any moment, you can {@linkplain #iterator() get} an {@link OfflineIterable.OfflineIterator OfflineIterator}
* on this object that returns all the elements added so far. Note that the returned iterator caches the current number of elements,
* so each iterator will return just the elements added at the time of its creation.
*
* Warning: The store object provided at {@linkplain OfflineIterable#OfflineIterable(it.unimi.dsi.io.OfflineIterable.Serializer, Object )
* construction time} is shared by all iterators.
*
*
Closing
*
* Both {@link OfflineIterable} and {@link OfflineIterable.OfflineIterator OfflineIterator} are {@link SafelyCloseable} (the latter will
* close its input stream when hasNext() returns false), but for better resource management you should close them after usage.
*
*
Store reuse
*
* @author Sebastiano Vigna
* @since 0.9.2
*/
public class OfflineIterable implements Iterable,SafelyCloseable {
public static final long serialVersionUID = 1L;
private static final Logger LOGGER = Util.getLogger( OfflineIterable.class );
/** An iterator returned by an {@link OfflineIterable}. */
public final static class OfflineIterator extends AbstractObjectIterator implements SafelyCloseable {
/** The data input stream that accesses the file of the related {@link OfflineIterable}. */
private final DataInputStream dis;
/** The number of elements in the related {@link OfflineIterable}. */
private final long size;
/** The serializer used to store and read the elements of this iterable. */
private final Serializer serializer;
/** An object that is (re)used by the iterator(s) iterating on this iterable. */
private final B store;
/** The number of elements read by this iterator. */
private long read;
/** Whether this iterator has been closed. */
private boolean closed = false;
private OfflineIterator( DataInputStream dis, final Serializer serializer, B store, long size ) {
this.dis = dis;
this.serializer = serializer;
this.store = store;
this.size = size;
}
public boolean hasNext() {
if ( read >= size ) close();
return read < size;
}
public B next() {
if ( !hasNext() ) throw new NoSuchElementException();
try {
serializer.read( dis, store );
}
catch ( IOException e ) {
throw new RuntimeException( e );
}
read++;
return store;
}
public void close() {
if ( !closed ) {
try {
dis.close();
}
catch ( IOException e ) {
throw new RuntimeException( e );
}
closed = true;
}
}
protected void finalize() throws Throwable {
try {
if ( ! closed ) {
LOGGER.warn( "This " + this.getClass().getName() + " [" + toString() + "] should have been closed." );
close();
}
}
finally {
super.finalize();
}
}
}
/** Determines a strategy to serialize and deserialize elements.
*/
public interface Serializer {
/** Writes out an element.
*
* @param x the element to be written.
* @param dos the stream where the element should be written.
* @throws IOException if an exception occurs while writing.
*/
public void write( A x, DataOutputStream dos ) throws IOException;
/** Reads an element.
*
* @param dis the stream whence the element should be read.
* @param x the object where the element will be read.
* @throws IOException if an exception occurs while reading.
*/
public void read( DataInputStream dis, B x ) throws IOException;
}
/** The serializer used to store and read the elements of this iterable. */
private final Serializer serializer;
/** The file where elements are serialized. */
private final File file;
/** A data output stream associated with {@link #file}. */
private final DataOutputStream dos;
/** An object that is (re)used by the iterator(s) iterating on this iterable. */
private final U store;
/** The number of elements written so far. */
private long size;
/** Whether this iterable has been closed. */
private boolean closed = false;
/** Creates an offline iterable with given serializer.
*
* @param serializer the serializer to be used.
* @param store an object that is (re)used by the iterator(s) iterating on this iterable.
* @throws IOException
*/
public OfflineIterable( final Serializer serializer, final U store ) throws IOException {
this.serializer = serializer;
this.store = store;
file = File.createTempFile( OfflineIterable.class.getSimpleName(), "elmts" );
file.deleteOnExit();
dos = new DataOutputStream( new FastBufferedOutputStream( new FileOutputStream( file ) ) );
}
/** Adds a new element at the end of this iterable.
*
* @param x the element to be added.
* @throws IOException
*/
public void add( T x ) throws IOException {
serializer.write( x, dos );
size++;
}
/** Adds all the elements of the given iterable at the end of this iterable.
*
* @param it the iterable producing the elements to be added.
* @throws IOException
*/
public void addAll( Iterable it ) throws IOException {
for ( T x: it ) add( x );
}
public OfflineIterator iterator() {
try {
dos.flush();
final DataInputStream dis = new DataInputStream( new FastBufferedInputStream( new FileInputStream( file ) ) );
return new OfflineIterator( dis, serializer, store, size );
}
catch ( IOException e ) {
throw new RuntimeException( e );
}
}
public void close() {
if ( !closed ) {
try {
dos.close();
file.delete();
}
catch ( IOException e ) {
throw new RuntimeException( e );
}
closed = true;
}
}
protected void finalize() throws Throwable {
try {
if ( ! closed ) {
LOGGER.warn( "This " + this.getClass().getName() + " [" + toString() + "] should have been closed." );
close();
}
}
finally {
super.finalize();
}
}
/** Returns the number of elements added so far, unless it is too big to fit in an integer (in which case this method will throw an
* exception).
*
* @return the number of elements added so far.
*/
public int size() {
final long length = length();
if ( length > Integer.MAX_VALUE ) throw new IllegalStateException( "The number of elements of this bit list (" + length + ") exceeds Integer.MAX_INT" );
return (int)length;
}
/** Returns the number of elements added so far.
*
* @return the number of elements added so far.
*/
public long length() {
return size;
}
}
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