org.snpeff.interval.VariantWithScore Maven / Gradle / Ivy

Go to download

Show more of this group Show more artifacts with this name
Show all versions of SnpEff Show documentation

Variant annotation and effect prediction package.

The newest version!

package org.snpeff.interval;

/**
 * A variant that has a numeric score.
 *
 * @author pcingola
 */
public class VariantWithScore extends Variant {

	private static final long serialVersionUID = 1L;

	double score;

	public VariantWithScore() {
		super();
	}

	public VariantWithScore(Marker parent, int start, int end, String id, double score) {
		super(parent, start, end, id);
		this.score = score;
	}

	@Override
	public VariantWithScore cloneShallow() {
		VariantWithScore clone = (VariantWithScore) super.cloneShallow();
		clone.score = score;
		return clone;
	}

	public double getScore() {
		return score;
	}

	public void setScore(double score) {
		this.score = score;
	}

}