smile.validation.ClassificationValidations Maven / Gradle / Ivy
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/*
* Copyright (c) 2010-2021 Haifeng Li. All rights reserved.
*
* Smile is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* Smile is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Smile. If not, see .
*/
package smile.validation;
import java.io.Serializable;
import java.util.List;
import smile.math.MathEx;
/**
* Classification model validation results.
*
* @param the model type.
*
* @author Haifeng
*/
public class ClassificationValidations implements Serializable {
private static final long serialVersionUID = 2L;
/** The multiple round validations. */
public final List> rounds;
/** The average of metrics. */
public final ClassificationMetrics avg;
/** The standard deviation of metrics. */
public final ClassificationMetrics sd;
/**
* Constructor.
* @param rounds the validation metrics of multipl rounds.
*/
public ClassificationValidations(List> rounds) {
this.rounds = rounds;
int k = rounds.size();
double[] fitTime = new double[k];
double[] scoreTime = new double[k];
int[] size = new int[k];
int[] error = new int[k];
double[] accuracy = new double[k];
double[] sensitivity = new double[k];
double[] specificity = new double[k];
double[] precision = new double[k];
double[] f1 = new double[k];
double[] mcc = new double[k];
double[] auc = new double[k];
double[] logloss = new double[k];
double[] crossentropy = new double[k];
for (int i = 0; i < k; i++) {
ClassificationMetrics metrics = rounds.get(i).metrics;
fitTime[i] = metrics.fitTime;
scoreTime[i] = metrics.scoreTime;
size[i] = metrics.size;
error[i] = metrics.error;
accuracy[i] = metrics.accuracy;
sensitivity[i] = metrics.sensitivity;
specificity[i] = metrics.specificity;
precision[i] = metrics.precision;
f1[i] = metrics.f1;
mcc[i] = metrics.mcc;
auc[i] = metrics.auc;
logloss[i] = metrics.logloss;
crossentropy[i] = metrics.crossentropy;
}
avg = new ClassificationMetrics(
MathEx.mean(fitTime),
MathEx.mean(scoreTime),
(int) Math.round(MathEx.mean(size)),
(int) Math.round(MathEx.mean(error)),
MathEx.mean(accuracy),
MathEx.mean(sensitivity),
MathEx.mean(specificity),
MathEx.mean(precision),
MathEx.mean(f1),
MathEx.mean(mcc),
MathEx.mean(auc),
MathEx.mean(logloss),
MathEx.mean(crossentropy)
);
sd = new ClassificationMetrics(
MathEx.sd(fitTime),
MathEx.sd(scoreTime),
(int) Math.round(MathEx.sd(size)),
(int) Math.round(MathEx.sd(error)),
MathEx.sd(accuracy),
MathEx.sd(sensitivity),
MathEx.sd(specificity),
MathEx.sd(precision),
MathEx.sd(f1),
MathEx.sd(mcc),
MathEx.sd(auc),
MathEx.sd(logloss),
MathEx.sd(crossentropy)
);
}
@Override
public String toString() {
StringBuilder sb = new StringBuilder("{\n");
sb.append(String.format(" fit time: %.3f ms ± %.3f,\n", avg.fitTime, sd.fitTime));
sb.append(String.format(" score time: %.3f ms ± %.3f,\n", avg.scoreTime, sd.scoreTime));
sb.append(String.format(" validation data size: %d ± %d,\n", avg.size, sd.size));
sb.append(String.format(" error: %d ± %d,\n", avg.error, sd.error));
sb.append(String.format(" accuracy: %.2f%% ± %.2f", 100 * avg.accuracy, 100 * sd.accuracy));
if (!Double.isNaN(avg.sensitivity)) sb.append(String.format(",\n sensitivity: %.2f%% ± %.2f", 100 * avg.sensitivity, 100 * sd.sensitivity));
if (!Double.isNaN(avg.specificity)) sb.append(String.format(",\n specificity: %.2f%% ± %.2f", 100 * avg.specificity, 100 * sd.specificity));
if (!Double.isNaN(avg.precision)) sb.append(String.format(",\n precision: %.2f%% ± %.2f", 100 * avg.precision, 100 * sd.precision));
if (!Double.isNaN(avg.f1)) sb.append(String.format(",\n F1 score: %.2f%% ± %.2f", 100 * avg.f1, 100 * sd.f1));
if (!Double.isNaN(avg.mcc)) sb.append(String.format(",\n MCC: %.2f%% ± %.2f", 100 * avg.mcc, 100 * sd.mcc));
if (!Double.isNaN(avg.auc)) sb.append(String.format(",\n AUC: %.2f%% ± %.2f", 100 * avg.auc, 100 * sd.auc));
if (!Double.isNaN(avg.logloss)) sb.append(String.format(",\n log loss: %.4f ± %.4f", avg.logloss, sd.logloss));
else if (!Double.isNaN(avg.crossentropy)) sb.append(String.format(",\n cross entropy: %.4f ± %.4f", avg.crossentropy, sd.crossentropy));
sb.append("\n}");
return sb.toString();
}
}