All Downloads are FREE. Search and download functionalities are using the official Maven repository.

smile.math.distance.LeeDistance Maven / Gradle / Ivy

/*******************************************************************************
 * Copyright (c) 2010-2020 Haifeng Li. All rights reserved.
 *
 * Smile is free software: you can redistribute it and/or modify
 * it under the terms of the GNU Lesser General Public License as
 * published by the Free Software Foundation, either version 3 of
 * the License, or (at your option) any later version.
 *
 * Smile is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Lesser General Public License for more details.
 *
 * You should have received a copy of the GNU Lesser General Public License
 * along with Smile.  If not, see .
 ******************************************************************************/

package smile.math.distance;

/**
 * In coding theory, the Lee distance is a distance between two strings
 * x1x2...xn and
 * y1y2...yn
 * of equal length n over the q-ary alphabet {0, 1, ..., q-1}
 * of size q ≥ 2, defined as
 * 

*

 *     sum min(|xi-yi|, q-|xi-yi|)
 * 
* If q = 2 or q = 3 the Lee distance coincides with the Hamming distance. * * @author Haifeng Li */ public class LeeDistance implements Metric { private static final long serialVersionUID = 1L; private int q; /** * Constructor with a given size q of alphabet. * @param q the size of q-ary alphabet. */ public LeeDistance(int q) { if (q < 2) { throw new IllegalArgumentException(String.format("The size of q-ary alphabet has to be larger than 1: q = %d", q)); } this.q = q; } @Override public String toString() { return String.format("Lee Distance(q = %d)", q); } @Override public double d(int[] x, int[] y) { if (x.length != y.length) { throw new IllegalArgumentException(String.format("Arrays have different length: x[%d], y[%d]", x.length, y.length)); } int dist = 0; for (int i = 0; i < x.length; i++) { double d = Math.abs(x[i] - y[i]); dist += Math.min(d, q-d); } return dist; } }




© 2015 - 2024 Weber Informatics LLC | Privacy Policy