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The Evoluzion-diploid module
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/*Copyright 2014 Adolfo R. Zurita*/
/*This file is part of EvoluZion.
EvoluZion is free software: you can redistribute it and/or modify
it under the terms of the GNU Lesser General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
EvoluZion is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License
along with EvoluZion. If not, see {
private World world;
Sprite body, alas, eyes, antennae, headP, resToxinas, sex, sp_pheromone,
dead;
float speed;
float seno, coseno;
float radius; // radio de los sentidos
float pheromone;
double toleranceTemp;
double optimalTemp;
float SaludCoefi;
private final NumberFormat format = new DecimalFormat("0.00");
double cuadradoTemp;
float width;
float height;
float mutationRate = 1000; // si mutar es true, indica la frecuencia de mutacion
float capacity; // cantidad maxima de masa y energia que puede portar el
// organismo
double energy = 484; // energia del organismo
double biomass = 1; // biomasa del organismo
float color; // variable color
float longevity; // tiempo en que muere de viejo milisegundos
int timeMitosis; // tiempo en que se divide
int timeCycle;
int seconds, seconds2, seconds3;
int random;// se usa para las operaciones random
int mark = 1; // 1= false -1= true
int quantity = 1;
Vector2 position;
Vector2 direction;
Rectangle border;
// patron de traduccion de las proteinas
String patternWidth = "..[RKH][R]......S[KRH]..";
String patternHeight = "..[RKH][R]......S[KRH]..";
String patternSpeed = ".[RKH][LMI][LMI].....Q[AG]........";
String patternColor = "ILI";
String patternPredator = ".....[M].{4,7}[MIV][KRH]..";
String patternRadius = "..[APTS]..[MILV]F";
String patternSense = "[M].{4,13}[IV][EV]";
String patternHunt = "..[PAG][A][L].{4,10}[HKR]...";
String patternEscape = ".....[QE].{2,15}[RKH][C]......";
String patternMutationRate = ".M.[LMIV][LMI]...[VLI]..";
String patternLongevity = ".....[DN][LMIV]......[QE]....[FY]";
String patternToleranceTemp = "...[VYS]..........[HPF].......";
String patternResATB = "......[GAP]G..{2,12}[IMLV][IMLV]....";
String patternPheromone = "M........F[KGS].{2,20}.[LIGSV][LIGSV]..";
String patronParteNoGen = "M..........DFL........[MI]";
char[] letras = {'a', 'b', 'c', 'd', 'e', 'f', 'g', 'h', 'i', 'j', 'k',
'l', 'm', 'n', 'o', 'p', 'q', 'r', 's', 't', 'u', 'v', 'w', 'x',
'y', 'z'};
String fechaNacimiento;
boolean mutable = true; // puede mutar o no
boolean carnivore = false; // capacidad de tomar alimentarse de otros
// organismos
boolean resistanceATB; // capacidad de resistir Antibioticos
boolean sense; // capacidad de sensar el entornno por comida
boolean hunt; // capacidad de buscar su comida
boolean escape;
boolean transferred = false;
boolean male = false;
boolean intoxicated = false;
boolean parteNoGen = false;// se reproduce asexualmente
//modelo de infection viral
boolean infected = false;
boolean immune = false;
int immunity;
long edad, delta, delta2, deltaToxico, deltaEnfermo, delta3, deltaAleatorio; // se usa
// para
// determinar
// el paso
// del
// tiempo
Genome adn, adn2, adn3, adn4, adn5, adn6, ch1, ch2, ch3, ch4, ch5, ch6,
ch7, ch8, ch9, ch10, ch11, ch12; // genoma
int identifier;// indica la especie del organismo
int carnivoreI;
int senseI;
int huntI;
int escapeI;
int carniI2;
int sentI2;
int cazarI2;
int escapI2;
int resistenciaI2;
int parteNoGenI;
int parteNoGenI2;
int resistenciaI;
int muriendo = 0;
String cromosoma; // todos los genes juntos
StringBuffer nombre;
Array aObjects; // memoria donde se guarda la posicion de las
// fuentes de alimento
Array aFemales; // memoria donde se guarda la posicion de las
// hembras
Array aPredators; // memoria donde se guarda la posicion de las
// fuentes de peligro
Array aAlleles;
Array aGenomes;
char base;// nucleotido
Allele aColor, aColor2, aAlto, aAlto2;
Genotype genotype;
Phenotype phenotype;
StringBuffer gen;
public Organism() {
}
public Organism(boolean male, Genome adn, Genome adn2, Genome adn3,
Genome adn4, Genome adn5, Genome adn6, Vector2 position,
StringBuffer name, World world) {
this.world = world;
fechaNacimiento = "" + world.minutes2 + ":" + world.seconds;
aObjects = new Array();
aFemales = new Array();
aPredators = new Array();
aAlleles = new Array();
aGenomes = new Array();
this.adn = adn;
this.adn2 = adn2;
this.adn3 = adn3;
this.adn4 = adn4;
this.adn5 = adn5;
this.adn6 = adn6;
this.male = male;
this.position = position;
this.nombre = name;
ch1 = new Genome(world, 1, 1, 1, 0, 0, 0);
ch2 = new Genome(world, 1, 1, 1, 0, 0, 0);
ch3 = new Genome(world, 1, 1, 1, 0, 0, 0);
ch4 = new Genome(world, 1, 1, 1, 0, 0, 0);
ch5 = new Genome(world, 0, 0, 0, 0, 0, 0, 0);
ch6 = new Genome(world, 0, 0, 0, 0, 0, 0, 0);
ch7 = new Genome(world, 0, 0, 0, 0, 0, 0, 0);
ch8 = new Genome(world, 0, 0, 0, 0, 0, 0, 0);
ch9 = new Genome(world, 0, 0, 0);
ch10 = new Genome(world, 0, 0, 0);
ch11 = new Genome(world, 0, 0, 0);
ch12 = new Genome(world, 0, 0, 0);
direction = new Vector2();
border = new Rectangle();
translate();
seconds = 0;
seconds2 = 0;
seconds3 = 0;
setTime();
setEdad();
setDelta();
setDelta3();
setDeltaToxico();
setDeltaEnfermo();
// alelos paracomparar
if (world.collectResistance) {
aAlleles.add(new Allele(world.tx.ResATB, (int) adn.translateMagnitude(
adn.resistanceATB, patternResATB) / 10, adn.resistanceATB
.toString()));//
aAlleles.add(new Allele(world.tx.ResATB, (int) adn2.translateMagnitude(
adn2.resistanceATB, patternResATB) / 10,
adn2.resistanceATB.toString()));
}//
if (world.collectHeight) {
aAlleles.add(new Allele(world.tx.size, (int) adn.translateMagnitude(
adn.width, patternWidth)
/ 10
+ (int) adn.translateMagnitude(adn.height, patternHeight)
/ 10, adn.height.toString() + adn.height.toString()));
aAlleles.add(new Allele(world.tx.size, (int) adn2.translateMagnitude(
adn2.width, patternWidth)
/ 10
+ (int) adn2.translateMagnitude(adn2.height, patternHeight)
/ 10, adn2.height.toString() + adn2.height.toString()));
}
if (world.collectSpeed) {
aAlleles.add(new Allele(world.tx.alas, (int) (adn3.translateMagnitude(
adn3.speed, patternSpeed) / 9), adn3.speed.toString()));
aAlleles.add(new Allele(world.tx.alas, (int) (adn4.translateMagnitude(
adn4.speed, patternSpeed) / 9), adn4.speed.toString()));
}
if (world.collectTemp) {
aAlleles.add(new Allele(world.tx.optimalTemp, (int) (adn.translateMagnitude(
adn.toleranceTemp, patternToleranceTemp) / 7),
adn.toleranceTemp.toString()));
aAlleles.add(new Allele(world.tx.optimalTemp, (int) (adn2.translateMagnitude(
adn2.toleranceTemp, patternToleranceTemp) / 7),
adn2.toleranceTemp.toString()));
}
if (world.collectPredator) {
aAlleles.add(new Allele(world.tx.predador, (int) adn.translateMagnitude(
adn.predator, patternPredator) / 6, adn.predator
.toString()));
aAlleles.add(new Allele(world.tx.predador, (int) adn2.translateMagnitude(
adn2.predator, patternPredator) / 6, adn2.predator
.toString()));
}
if (world.collectSense) {
aAlleles.add(new Allele(world.tx.senses, (int) adn.translateMagnitude(
adn.sense, patternSense) / 6, adn.sense.toString()));
aAlleles.add(new Allele(world.tx.senses, (int) adn2.translateMagnitude(
adn2.sense, patternSense) / 6, adn2.sense
.toString()));
}
if (world.collectHunt) {
aAlleles.add(new Allele(world.tx.searchFood, (int) adn3
.translateMagnitude(adn3.hunt, patternHunt) / 7,
adn3.hunt.toString()));
aAlleles.add(new Allele(world.tx.searchFood, (int) adn4
.translateMagnitude(adn4.hunt, patternHunt) / 7,
adn4.hunt.toString()));
}
if (world.collectEscape) {
aAlleles.add(new Allele(world.tx.escape, (int) adn3.translateMagnitude(
adn3.escape, patternEscape) / 7, adn3.escape
.toString()));
aAlleles.add(new Allele(world.tx.escape, (int) adn4.translateMagnitude(
adn4.escape, patternEscape) / 7, adn4.escape
.toString()));
}
if (world.collectRadius) {
aAlleles.add(new Allele(world.tx.alcanceVisual,
(int) adn3.translateMagnitude(adn3.radius,
patternRadius) / 7, adn3.radius.toString()));
aAlleles.add(new Allele(world.tx.alcanceVisual,
(int) adn4.translateMagnitude(adn4.radius,
patternRadius) / 7, adn4.radius.toString()));
}
if (world.collectPheromone) {
aAlleles.add(new Allele(world.tx.feromona, (int) adn3.translateMagnitude(
adn3.pheromone, patternPheromone) / 30, adn3.pheromone
.toString()));
aAlleles.add(new Allele(world.tx.feromona, (int) adn4.translateMagnitude(
adn4.pheromone, patternPheromone) / 30, adn4.pheromone
.toString()));
}
if (world.colectarParteNoGen) {
aAlleles.add(new Allele(world.tx.partenogenesis,
(int) adn3.translateMagnitude(adn3.parteNoGen,
patronParteNoGen) / 10, adn3.parteNoGen.toString()));
aAlleles.add(new Allele(world.tx.partenogenesis,
(int) adn4.translateMagnitude(adn4.parteNoGen,
patronParteNoGen) / 10, adn4.parteNoGen.toString()));
}
if (world.collectMutationRate) {
aAlleles.add(new Allele(world.tx.fidelidadADNpol,
(int) ((adn5.translateMagnitude(adn5.mutationRate,
patternMutationRate) / 8)), adn5.mutationRate.toString()));
if (!male) {
aAlleles.add(new Allele(world.tx.fidelidadADNpol, (int) ((adn6
.translateMagnitude(adn6.mutationRate,
patternMutationRate) / 8)), adn6.mutationRate
.toString()));
}
}
if (world.collectLongevity) {
aAlleles.add(new Allele(world.tx.longevidad,
(int) (adn5.translateMagnitude(adn5.longevity,
patternLongevity) / 7), adn5.longevity.toString()));
if (!male) {
aAlleles.add(new Allele(world.tx.longevidad, (int) (adn6
.translateMagnitude(adn6.longevity,
patternLongevity) / 7), adn6.longevity
.toString()));
}
}
if (world.collectColor) {
aAlleles.add(new Allele(world.tx.color, (int) adn5.translateMagnitude(
adn5.color, patternColor) / 10, adn5.color.toString()));
if (!male) {
aAlleles.add(new Allele(world.tx.color, (int) adn6.translateMagnitude(
adn6.color, patternColor) / 10, adn6.color
.toString()));
}
} else {
}
// Genomas para comparar
gen = new StringBuffer();
if (world.viewMaleFemale) {
if (male) {
gen.append(world.tx.male);
}
if (!male) {
gen.append(world.tx.female);
}
}
var n1 = 0;
var n2 = 0;
if (!male) {
for (var i = 0; i < aAlleles.size; i = i + 2) {
n1 = aAlleles.get(i).identifier;
n2 = aAlleles.get(i + 1).identifier;
if (n1 == n2) {
gen.append(";a").append(n1).append(" / a").append(n2);
}
if (n1 > n2) {
gen.append(";a").append(n1).append(" / a").append(n2);
}
if (n1 < n2) {
gen.append(";a").append(n2).append(" / a").append(n1);
}
}
}
if (male) {
var salto = 2;
for (var i = 0; i < aAlleles.size; i = i + salto) {
if (!aAlleles.get(i).name.equals(world.tx.color)
&& !aAlleles.get(i).name.equals(world.tx.longevidad)
&& !aAlleles.get(i).name.equals(world.tx.fidelidadADNpol)) {
n1 = aAlleles.get(i).identifier;
n2 = aAlleles.get(i + 1).identifier;
if (n1 == n2) {
gen.append(";a").append(n1).append(" / a").append(n2);
}
if (n1 > n2) {
gen.append(";a").append(n1).append(" / a").append(n2);
}
if (n1 < n2) {
gen.append(";a").append(n2).append(" / a").append(n1);
}
}
if (aAlleles.get(i).name.equals(world.tx.color)
|| aAlleles.get(i).name.equals(world.tx.longevidad)
|| aAlleles.get(i).name.equals(world.tx.fidelidadADNpol)) {
n1 = aAlleles.get(i).identifier;
gen.append(";a").append(n1).append(" /");
salto = 1;
}
}
}
genotype = new Genotype(gen.toString());
}
public float translateSpeed(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = (g1.translateMagnitude(g1.speed, patternSpeed) / 250)
/ world.zoom;
var gen2 = (g2.translateMagnitude(g2.speed, patternSpeed) / 250)
/ world.zoom;
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0) {
fenotipe = (gen1 + gen2) / 2;
}
return fenotipe;
}
public float translateAncho(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = (g1.translateMagnitude(g1.width, patternWidth) / (224 * world.zoom));
var gen2 = (g2.translateMagnitude(g2.width, patternWidth) / (224 * world.zoom));
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 > gen1) {
fenotipe = gen2;
}
if (gen2 > 0 && gen1 > 0 && gen2 < gen1) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 == gen1) {
fenotipe = gen1;
}
return fenotipe;
}
public float translateAlto(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = (g1.translateMagnitude(g1.height, patternHeight) / (224 * world.zoom));
var gen2 = (g2.translateMagnitude(g2.height, patternHeight) / (224 * world.zoom));
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 > gen1) {
fenotipe = gen2;
}
if (gen2 > 0 && gen1 > 0 && gen2 < gen1) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 == gen1) {
fenotipe = gen1;
}
return fenotipe;
}
public double translateToleTemp(Genome g1, Genome g2) {
double fenotipe = 0;
var gen1 = (g1.translateMagnitude(g1.toleranceTemp,
patternToleranceTemp) / 126.2552);
var gen2 = (g2.translateMagnitude(g2.toleranceTemp,
patternToleranceTemp) / 126.2552);
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0) {
fenotipe = (gen1 + gen2) / 2;
}
return fenotipe;
}
public float translateColor(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = g1.translateMagnitude(g1.color, patternColor) / 10;
var gen2 = g2.translateMagnitude(g2.color, patternColor) / 10;
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 > gen1) {
fenotipe = gen2;
}
if (gen2 > 0 && gen1 > 0 && gen2 < gen1) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 == gen1) {
fenotipe = gen1;
}
return fenotipe;
}
public float translateRadio(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = (g1.translateMagnitude(g1.radius,
patternRadius) / 30);
var gen2 = (g2.translateMagnitude(g2.radius,
patternRadius) / 30);
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0) {
fenotipe = (gen1 + gen2) / 2;
}
return fenotipe;
}
public float translateferomona(Genome g1, Genome g2) {
float fenotipe = 0;
if (!male) {
var gen1 = (g1
.translateMagnitude(g1.pheromone, patternPheromone) / 30);
var gen2 = (g2
.translateMagnitude(g2.pheromone, patternPheromone) / 30);
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 > gen1) {
fenotipe = gen2;
}
if (gen2 > 0 && gen1 > 0 && gen2 < gen1) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0 && gen2 == gen1) {
fenotipe = gen1;
}
}
return fenotipe;
}
public float translateLongevity(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = (g1
.translateMagnitude(g1.longevity, patternLongevity) * 8.090f);
var gen2 = (g2
.translateMagnitude(g2.longevity, patternLongevity) * 8.090f);
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0) {
fenotipe = (gen1 + gen2) / 2;
}
return fenotipe;
}
public float translateMutationRate(Genome g1, Genome g2) {
float fenotipe = 0;
var gen1 = (float) ((g1.translateMagnitude(g1.mutationRate,
patternMutationRate) / 1.9) * world.efficiency);
var gen2 = (float) ((g2.translateMagnitude(g2.mutationRate,
patternMutationRate) / 1.9) * world.efficiency);
if (gen1 == 0 && gen2 == 0) {
fenotipe = 0;
}
if (gen1 == 0 && gen2 > 0) {
fenotipe = gen2;
}
if (gen2 == 0 && gen1 > 0) {
fenotipe = gen1;
}
if (gen2 > 0 && gen1 > 0) {
fenotipe = (gen1 + gen2) / 2;
}
return fenotipe;
}
public boolean translatePredator(Genome g1, Genome g2) {
var fenotipe = true;
var gen1 = g1.translateBoolean(g1.predator, patternPredator);
var gen2 = g2.translateBoolean(g2.predator, patternPredator);
if (!gen1 && !gen2) {
fenotipe = false;
}
return fenotipe;
}
public boolean translateSense(Genome g1, Genome g2) {
var fenotipe = true;
var gen1 = g1.translateBoolean(g1.sense, patternSense);
var gen2 = g2.translateBoolean(g2.sense, patternSense);
if (!gen1 && !gen2) {
fenotipe = false;
}
return fenotipe;
}
public boolean translateCazar(Genome g1, Genome g2) {
var fenotipe = true;
var gen1 = g1.translateBoolean(g1.hunt, patternHunt);
var gen2 = g2.translateBoolean(g2.hunt, patternHunt);
if (!gen1 && !gen2) {
fenotipe = false;
}
return fenotipe;
}
public boolean translateEscape(Genome g1, Genome g2) {
var fenotipe = true;
var gen1 = g1.translateBoolean(g1.escape, patternEscape);
var gen2 = g2.translateBoolean(g2.escape, patternEscape);
if (!gen1 && !gen2) {
fenotipe = false;
}
return fenotipe;
}
public boolean translatParteNoGen(Genome g1, Genome g2) {
var fenotipe = false;
var gen1 = g1.translateBoolean(g1.parteNoGen, patronParteNoGen);
var gen2 = g2.translateBoolean(g2.parteNoGen, patronParteNoGen);
if (!gen1 && !gen2) {
fenotipe = true;
}
return fenotipe;
}
public boolean translateResisATB(Genome g1, Genome g2) {
var fenotipe = true;
var gen1 = g1.translateBoolean(g1.resistanceATB, patternResATB);
var gen2 = g2.translateBoolean(g2.resistanceATB, patternResATB);
if (!gen1 && !gen2) {
fenotipe = false;
}
return fenotipe;
}
// para machos homosigotas en C3
public float translateColor(Genome g1) {
float gen1;
gen1 = g1.translateMagnitude(g1.color, patternColor) / 10;
return gen1;
}
public float translateLongevity(Genome g1) {
return (g1
.translateMagnitude(g1.longevity, patternLongevity) * 8.090f);
}
public float translateMutationRate(Genome g1) {
float gen1;
gen1 = (float) ((g1.translateMagnitude(g1.mutationRate,
patternMutationRate) / 1.9) * world.efficiency);
return (int) gen1;
}
public void translate() {
resistanceATB = translateResisATB(adn, adn2);
width = translateAncho(adn, adn2);
height = translateAlto(adn, adn2);
sense = translateSense(adn, adn2);
toleranceTemp = translateToleTemp(adn, adn2);
carnivore = translatePredator(adn, adn2);
speed = translateSpeed(adn3, adn4);
hunt = translateCazar(adn3, adn4);
escape = translateEscape(adn3, adn4);
radius = translateRadio(adn3, adn4);
pheromone = translateferomona(adn3, adn4);
parteNoGen = translatParteNoGen(adn3, adn4);
if (!male) {
longevity = translateLongevity(adn5, adn6);
mutationRate = translateMutationRate(adn5, adn6);
color = translateColor(adn5, adn6);
}
if (male) {
longevity = translateLongevity(adn5);
mutationRate = translateMutationRate(adn5);
color = translateColor(adn5);
}
// asigna valoresnumericos para los genes booleanos
resistenciaI = (int) adn.translateMagnitude(adn.resistanceATB,
patternResATB) / 8;
carnivoreI = (int) adn.translateMagnitude(adn.predator, patternPredator) / 6;
senseI = (int) adn.translateMagnitude(adn.sense, patternSense) / 6;
huntI = (int) adn3.translateMagnitude(adn3.hunt, patternHunt) / 7;
escapeI = (int) adn3.translateMagnitude(adn3.escape, patternEscape) / 7;
parteNoGenI = (int) adn3.translateMagnitude(adn3.parteNoGen,
patronParteNoGen) / 10;
resistenciaI2 = (int) adn2.translateMagnitude(adn2.resistanceATB,
patternResATB) / 8;
carniI2 = (int) adn2.translateMagnitude(adn2.predator,
patternPredator) / 6;
sentI2 = (int) adn2.translateMagnitude(adn2.sense, patternSense) / 6;
cazarI2 = (int) adn4.translateMagnitude(adn4.hunt, patternHunt) / 7;
escapI2 = (int) adn4
.translateMagnitude(adn4.escape, patternEscape) / 7;
parteNoGenI2 = (int) adn4.translateMagnitude(adn4.parteNoGen,
patronParteNoGen) / 10;
// suma todos los genes y se multiplican por un factor de ponderacion
// para que cada uno de más o menos 1000
float suma = (int) ((width * 135.3) + (height * 135.3) + (speed * 115.6)
+ (toleranceTemp * 35.52) + (longevity * 0.03333) + (mutationRate * 0.486));
// + resistenciaI +resistenciaI2 + sentI+ sentI2+ carniI + carniI2+
// radioConsiente+cazarI+cazarI2+escapI+escapI2
// +parteNoGenI+parteNoGenI2) ;
// System.out.println(ancho +";"+ alto+";"+ speed +";"+
// toleranciaTemp+";"+ longevidad+";"+ tasaMut+";"+
// resistenciaI +";"+resistenciaI2+";" + sentI+";"+ sentI2+";"+
// carniI+";" + carniI2+";"+
// radioConsiente+";"+cazarI+";"+cazarI2+";"+escapI+";"+escapI2
// +";"+parteNoGenI+";"+parteNoGenI2);
SaludCoefi = suma / 6000;
timeMitosis = (int) (20000 / SaludCoefi);
longevity = longevity * SaludCoefi;
optimalTemp = toleranceTemp - 3;
// System.out.println("suma: "+suma + ", SaludCoefi: "+SaludCoefi
// +", TiemMit: "+ tiempoMitosis+ ",longev: "+ longevidad);
// limita el tamaño menos
// limita el tamaño menos
if (height > 0 && height < 0.5) {
height = 0.5f;
}
if (width > 0 && width < 0.5) {
width = 0.5f;
}
capacity = (int) (width * height);
biomass = 0;
capacity = (width * height);
// biomasa=1;
if (energy > capacity) {
energy = capacity;
}
// if(biomasa>capacidad){biomasa=capacidad;}
var indexcolor = 0;
if (color == 0) {
indexcolor = 0;
}
if (color > 0 && color >= 76) {
indexcolor = 1;
}
if (color > 76 && color <= 152) {
indexcolor = 2;
}
if (color > 152 && color <= 228) {
indexcolor = 3;
}
if (color > 228 && color <= 304) {
indexcolor = 4;
}
if (color > 304 && color <= 380) {
indexcolor = 5;
}
if (color > 380 && color <= 456) {
indexcolor = 6;
}
if (color > 456 && color <= 532) {
indexcolor = 7;
}
if (color > 532 && color <= 608) {
indexcolor = 8;
}
if (color > 608 && color <= 684) {
indexcolor = 9;
}
if (color > 684 && color <= 760) {
indexcolor = 10;
}
if (color > 760) {
indexcolor = 10;
}
body = new Sprite(world.organismTexture.getRegions().get(indexcolor));
body.setOrigin(position.x, position.y);
body.setPosition(this.position.x, this.position.y);
body.setSize(width, height * 3);
alas = new Sprite(world.organismTexture.getRegions().get(16));
alas.setOrigin(position.x, position.y);
alas.setPosition(this.position.x, this.position.y);
alas.setSize(speed * 3, 10);
var colorOjos = 0;
if (!hunt && !escape) {
colorOjos = 11;
}
if (hunt && !escape) {
colorOjos = 12;
}
if (!hunt && escape) {
colorOjos = 13;
}
if (hunt && escape) {
colorOjos = 14;
}
eyes = new Sprite(world.organismTexture.getRegions().get(colorOjos));
eyes.setSize(width, height);
eyes.setPosition(this.position.x, this.position.y);
antennae = new Sprite(world.organismTexture.getRegions().get(17));
antennae.setSize(width, height);
headP = new Sprite(world.organismTexture.getRegions().get(15));
headP.setSize(width, height);
resToxinas = new Sprite(world.organismTexture.getRegions().get(18));
resToxinas.setSize(width, height);
// transferido = new Sprite(m.transferido);
// transferido.setPosition(this.posicion.x,this.posicion.y);
// transferido.setSize(ancho+5, alto+5);
var g = 0;
if (male) {
g = 21;
}
if (!male && !parteNoGen) {
g = 20;
}
if (!male && parteNoGen) {
g = 22;
}
sex = new Sprite(world.organismTexture.getRegions().get(g));
sex.setOrigin(position.x, position.y);
sex.setSize(width * 2, height * 2);
sex.setPosition(this.position.x, this.position.y - height);
sp_pheromone = new Sprite(world.organismTexture.getRegions().get(19));
sp_pheromone.setOrigin(this.position.x, this.position.y);
sp_pheromone.setSize(pheromone / 5, pheromone / 5);
sp_pheromone.setPosition(this.position.x, this.position.y - height);
phenotype = new Phenotype(world);
phenotype.name = getFenotipo(world);
border.height = height;
border.width = width;
}
public String getFenotipo(World mu) {
var sb = new StringBuffer();
if (world.viewMaleFemale) {
if (male) {
sb.append(world.tx.male);
}
if (!male) {
sb.append(world.tx.female);
}
}
if (mu.collectResistance) {
var ge1 = adn.translateBoolean(adn.resistanceATB, patternResATB);
var ge2 = adn2.translateBoolean(adn2.resistanceATB,
patternResATB);
if (ge1 == ge2) {
if (resistenciaI > resistenciaI2) {
sb.append(";Tox-").append(this.resistenciaI);
}
if (resistenciaI2 > resistenciaI) {
sb.append(";Tox-").append(this.resistenciaI2);
}
if (resistenciaI2 == resistenciaI) {
sb.append(";Tox-").append(this.resistenciaI2);
}
}
if (ge1 && !ge2) {
sb.append(";Tox-").append(this.resistenciaI);
}
if (!ge1 && ge2) {
sb.append(";Tox-").append(this.resistenciaI2);
}
}
if (mu.collectWidth) {
sb.append(";Siz-").append((int) (this.width * 54.934) + (int) (this.height * 54.934));
}
if (mu.collectSpeed) {
sb.append(";Win-").append((int) (this.speed * 55.477f));
}
if (mu.collectTemp) {
sb.append(";Tem-").append((int) (this.toleranceTemp));
}
if (mu.collectPredator) {
var ge1 = adn.translateBoolean(adn.predator, patternPredator);
var ge2 = adn2.translateBoolean(adn.predator, patternPredator);
if (ge1 == ge2) {
if (carnivoreI > carniI2) {
sb.append(";Pre-").append(this.carnivoreI);
}
if (carniI2 > carnivoreI) {
sb.append(";Pre-").append(this.carniI2);
}
if (carniI2 == carnivoreI) {
sb.append(";Pre-").append(this.carniI2);
}
}
if (ge1 && !ge2) {
sb.append(";Pre-").append(this.carnivoreI);
}
if (!ge1 && ge2) {
sb.append(";Pre-").append(this.carniI2);
}
}
if (mu.collectSense) {
var ge1 = adn.translateBoolean(adn.sense, patternSense);
var ge2 = adn2.translateBoolean(adn2.sense, patternSense);
if (ge1 == ge2) {
if (senseI > sentI2) {
sb.append(";Sen-").append(this.senseI);
}
if (sentI2 > senseI) {
sb.append(";Sen-").append(this.sentI2);
}
if (sentI2 == senseI) {
sb.append(";Sen-").append(this.sentI2);
}
}
if (ge1 && !ge2) {
sb.append(";Sen-").append(this.senseI);
}
if (!ge1 && ge2) {
sb.append(";Sen-").append(this.sentI2);
}
}
if (mu.collectHunt) {
var ge1 = adn3.translateBoolean(adn3.hunt, patternHunt);
var ge2 = adn4.translateBoolean(adn4.hunt, patternHunt);
if (ge1 == ge2) {
if (huntI > cazarI2) {
sb.append(";Ba-").append(this.huntI);
}
if (cazarI2 > huntI) {
sb.append(";Ba-").append(this.cazarI2);
}
if (cazarI2 == huntI) {
sb.append(";Ba-").append(this.cazarI2);
}
}
if (ge1 && !ge2) {
sb.append(";Ba-").append(this.huntI);
}
if (!ge1 && ge2) {
sb.append(";Ba-").append(this.cazarI2);
}
}
if (mu.collectEscape) {
var ge1 = adn3.translateBoolean(adn3.escape, patternEscape);
var ge2 = adn4.translateBoolean(adn4.escape, patternEscape);
if (ge1 == ge2) {
if (escapeI > escapI2) {
sb.append(";Ya-").append(this.escapeI);
}
if (escapI2 > escapeI) {
sb.append(";Ya-").append(this.escapI2);
}
if (escapI2 == escapeI) {
sb.append(";Ya-").append(this.escapI2);
}
}
if (ge1 && !ge2) {
sb.append(";Ya-").append(this.escapeI);
}
if (!ge1 && ge2) {
sb.append(";Ya-").append(this.escapI2);
}
}
if (mu.colectarParteNoGen) {
var ge1 = adn3.translateBoolean(adn3.parteNoGen,
patronParteNoGen);
var ge2 = adn4.translateBoolean(adn4.parteNoGen,
patronParteNoGen);
if (ge1 == ge2) {
if (parteNoGenI > parteNoGenI2) {
sb.append(";nG-").append(this.parteNoGenI);
}
if (parteNoGenI2 > parteNoGenI) {
sb.append(";nG-").append(this.parteNoGenI2);
}
if (parteNoGenI2 == parteNoGenI) {
sb.append(";nG-").append(this.parteNoGenI2);
}
}
if (ge1 && !ge2) {
sb.append(";nG-").append(this.parteNoGenI);
}
if (!ge1 && ge2) {
sb.append(";nG-").append(this.parteNoGenI2);
}
}
if (mu.collectRadius) {
sb.append(";Rc-").append((int) this.radius);
}
if (mu.collectPheromone) {
sb.append(";Fr-").append((int) this.pheromone);
}
if (mu.collectMutationRate) {
sb.append(";Mut-").append(this.mutationRate);
}
if (mu.collectLongevity) {
sb.append(";lon-").append(this.longevity);
}
if (mu.collectColor) {
sb.append(";Col-").append((int) this.color);
}
// System.out.println(sentI);
return sb.toString();
}
// permite al programa saber se un organismo es diferente uno de otro
public float Identificar(World mu) {
return ((height / width) * (height * width));
}
public void verOrganismo(SpriteBatch sb) {
sb.begin();
if (!male) {
sp_pheromone.draw(sb);
}
body.draw(sb);
alas.draw(sb);
if (carnivore) {
headP.draw(sb);
}
eyes.draw(sb);
if (sense) {
antennae.draw(sb);
}
if (resistanceATB) {
resToxinas.draw(sb);
}
sex.draw(sb);
sb.end();
}
public void verMarcado(ShapeRenderer sr, SpriteBatch sb, BitmapFont f) {
if (mark == -1) {
sr.begin(ShapeType.Filled);
sr.setColor(Color.GREEN);
sr.rect(border.x - 2, border.y - 2, border.width + 4, border.height + 4);
sr.end();
sb.begin();
f.setColor(Color.GREEN);
f.draw(sb, nombre, position.x + width + 5, position.y + (height) + 5);
f.draw(sb, "M:" + format.format(biomass), position.x + width + 5,
position.y);
f.draw(sb, "E:" + format.format(energy), position.x + width + 5,
position.y - 20);
f.draw(sb, "V:" + format.format(speed), position.x + width + 5,
position.y - 40);
sb.end();
}
}
public void verBorde(ShapeRenderer sr) {
sr.begin(ShapeType.Filled);
sr.setColor(Color.CYAN);
sr.rect(border.x, border.y, border.width, border.height);
sr.end();
}
public void Ordenar() {
body.setPosition(position.x, position.y);
alas.setPosition(
this.position.x + body.getWidth() / 2 - alas.getWidth() / 2,
this.position.y + body.getHeight() / 2 - alas.getHeight() / 2);
eyes.setPosition(
this.position.x + body.getWidth() / 2 - eyes.getWidth() / 2,
this.position.y + body.getHeight() - alas.getHeight() / 2);
if (sense) {
antennae.setPosition(this.position.x + body.getWidth() / 2
- antennae.getWidth() / 2,
this.position.y + body.getHeight());
}
if (carnivore) {
headP.setPosition(this.position.x + body.getWidth() / 2
- headP.getWidth() / 2,
this.position.y + body.getHeight() - headP.getHeight());
}
if (resistanceATB) {
resToxinas.setPosition(this.position.x + body.getWidth() / 2
- resToxinas.getWidth() / 2,
this.position.y + resToxinas.getHeight() / 2);
}
sex.setPosition(position.x - sex.getWidth() / 4,
position.y - sex.getHeight());
sp_pheromone.setPosition(
this.position.x + body.getWidth() / 2
- sp_pheromone.getWidth() / 2,
this.position.y + body.getHeight() / 2
- sp_pheromone.getHeight() / 2);
// transferido.setPosition(posicion.x-2.5f,posicion.y-2.5f);
border.x = position.x;
border.y = position.y;
}
public void update() {
if (height <= 1 || width <= 1) {
morir();
}
if (height > 1 && width > 1) {
// if(biomasa<=0){morir();}
if (toleranceTemp < world.temperatura) {
morir();
}
if (world.temperatura < toleranceTemp - 6) {
morir();
}
if (world.antibiotico == 1) {
if (!resistanceATB) {
intoxicado();
}
}
//if (infectado == true) {
// enfermedad();
// System.out.println(segundos3);
//}
if (world.pausaGame == 1) {
metabolismo();
contadorTiempo();
apoptosis();
aleatorio();
if (sense) {
escannearObjetos();
}
if (hunt) {
cazarObjetos();
}
if (escape) {
escapar();
}
if (male) {
buscarHembra();
}
}
position.add(Gdx.graphics.getDeltaTime() * (direction.x) * speed,
Gdx.graphics.getDeltaTime() * (direction.y) * speed);
body.setPosition(position.x, position.y);
alas.setPosition(
this.position.x + body.getWidth() / 2 - alas.getWidth()
/ 2, this.position.y + body.getHeight() / 2
- alas.getHeight() / 2);
eyes.setPosition(
this.position.x + body.getWidth() / 2 - eyes.getWidth()
/ 2,
this.position.y + body.getHeight() - alas.getHeight() / 2);
if (sense) {
antennae.setPosition(this.position.x + body.getWidth() / 2
- antennae.getWidth() / 2,
this.position.y + body.getHeight());
}
if (carnivore) {
headP.setPosition(
this.position.x + body.getWidth() / 2
- headP.getWidth() / 2,
this.position.y + body.getHeight()
- headP.getHeight());
}
if (resistanceATB) {
resToxinas.setPosition(this.position.x + body.getWidth() / 2
- resToxinas.getWidth() / 2, this.position.y
+ resToxinas.getHeight() / 2);
}
sex.setPosition(position.x - sex.getWidth() / 4, position.y
- sex.getHeight());
sp_pheromone.setPosition(
this.position.x + body.getWidth() / 2
- sp_pheromone.getWidth() / 2,
this.position.y + body.getHeight() / 2
- sp_pheromone.getHeight() / 2);
// transferido.setPosition(posicion.x-2.5f,posicion.y-2.5f);
border.x = position.x;
border.y = position.y;
// direccion.x= (float) Math.sqrt((this.SPEED*this.SPEED) -
// (direccion.y*direccion.y));
if (!world.verFrontera) {
if (position.x < 0) {
position.x = world.ancho - width;
//direccion.x = direccion.x * (-1);
}
if (position.x > world.ancho) {
position.x = 0 + width;
//direccion.x = direccion.x * (-1);
}
}
if (world.verFrontera) {
if (position.x < 0) {
position.x = 1;
direction.x = direction.x * (-1);
}
if (position.x > world.ancho) {
position.x = world.ancho - width;
direction.x = direction.x * (-1);
}
}
if (position.y < 0) {
position.y = world.alto - height;
//direccion.y = direccion.y * (-1);
}
if (position.y > world.alto) {
position.y = 0 + height;
//direccion.y = direccion.y * (-1);
}
// System.out.println("Speed " + SPEED);
}
}
public void metabolismo() {
if (deltaTime() > msecondTime(100)) {
float movX = direction.x * speed;
float movY = direction.y * speed;
var movh = (float) Math.sqrt((movX * movX) + (movY * movY));
cuadradoTemp = (optimalTemp - world.temperatura)
* (optimalTemp - world.temperatura);
// System.out.println(cuadradoTemp);
if (cuadradoTemp <= 1) {
energy = energy
- (width * height)
/ 150f
- (0.5f * (width * height) * (movh * movh) / 350000f)
* world.zoom;
}
if (cuadradoTemp > 1) {
energy = (float) energy
- ((width * height) / 400f)
* cuadradoTemp
- (0.5f * (width * height) * (movh * movh) / 35000f)
* world.zoom * cuadradoTemp;
// System.out.println((float)(ancho*alto)/10000f*cuadradoTemp);
}
setTime();
}
if (energy <= 0) {
morir();
}
}// (Math.random()*(Max-Min))+Min)
public void aleatorio() {
if (delta3Time() > msecondTime((long) (Math.random() * (20000 - 5000)) + 5000)) {
direction.x = (float) (Math.random() * (10 + 10) - 10);
direction.y = (float) (Math.random() * (10 + 10) - 10);
if (direction.x > 10) {
direction.x = 10;
}
if (direction.x < -10) {
direction.x = -10;
}
if (direction.y > 10) {
direction.y = 10;
}
if (direction.y < -10) {
direction.y = -10;
}
setDelta3();
}
}
public void escannearObjetos() {
if (sense) {
for (var i = 0; i < aObjects.size; i++) {
aObjects.removeIndex(i);
}// limpia la lista par un nuevo escaneo
for (var i = 0; i < aPredators.size; i++) {
aPredators.removeIndex(i);
}// limpia la lista par un nuevo escaneo
if (male) {
for (var i = 0; i < aFemales.size; i++) {
aFemales.removeIndex(i);
}
}
// si la frontera no esta activada
if (!world.verFrontera) {
if (!carnivore) {
for (Qenergy qe : world.aqe) {
if (qe.visible) {
float qX = qe.position.x;
float qY = qe.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius) {
aObjects.add(new Vector2(qX, qY));
}
}
}
}
if (carnivore) {
for (var i = 0; i < world.organisms.size; i++) {
Organism or = world.organisms.get(i);
if (this != or && identifier != or.identifier
&& capacity > or.capacity) {
// if
// (!or.getIdentificador().equals(or2.getIdentificador())){
float qX = or.position.x;
float qY = or.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius) {
aObjects.add(new Vector2(qX, qY));
}
// System.out.println("presa detectada");
}
}
}
if (male) {
for (var i = 0; i < world.organisms.size; i++) {
Organism or = world.organisms.get(i);
if (!or.male
&& or.seconds >= or.timeMitosis / 1000
&& (or.biomass / or.capacity) > 0.8) {
// if
// (!or.getIdentificador().equals(or2.getIdentificador())){
float qX = or.position.x;
float qY = or.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius * 3) {
aFemales.add(or);
}
// System.out.println("hembra detectada"+
// aHembras.size);
}
}
}
}
// si la frontera esta activada
// si la frontera esta activada
if (world.verFrontera) {
// panel izquierdo
if (!carnivore && this.position.x < world.ancho / 2) { // si
// el
// organismo
// esta
// a
// la
// izquierda
for (Qenergy qeI : world.aqe) {
if (qeI.position.x < world.ancho / 2 && qeI.visible) {
float qX = qeI.position.x;
float qY = qeI.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius) {
aObjects.add(new Vector2(qX, qY));
}
}
}
}
if (carnivore && this.position.x < world.ancho / 2) {
for (var i = 0; i < world.organisms.size; i++) {
Organism or = world.organisms.get(i);
if (or.position.x < world.ancho / 2 && this != or
&& identifier != or.identifier
&& capacity > or.capacity) {
// if
// (!or.getIdentificador().equals(or2.getIdentificador())){
float qX = or.position.x;
float qY = or.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius) {
aObjects.add(new Vector2(qX, qY));
}
// System.out.println("presa detectada");
}
}
}
// panel Derecho
if (!carnivore && this.position.x > world.ancho / 2) { // si
// el
// organismo
// esta
// a
// la
// Derecha
for (Qenergy qeD : world.aqe) {
if (qeD.position.x > world.ancho / 2 && qeD.visible) {
float qX = qeD.position.x;
float qY = qeD.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius) {
aObjects.add(new Vector2(qX, qY));
}
}
}
}
if (carnivore && this.position.x > world.ancho / 2) {
for (var i = 0; i < world.organisms.size; i++) {
Organism or = world.organisms.get(i);
if (or.position.x > world.ancho / 2 && this != or
&& identifier != or.identifier
&& capacity > or.capacity) {
// if
// (!or.getIdentificador().equals(or2.getIdentificador())){
float qX = or.position.x;
float qY = or.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
if (h < radius) {
aObjects.add(new Vector2(qX, qY));
}
// System.out.println("presa detectada");
}
}
}
}
aObjects.shrink();
aPredators.shrink();
}
}
public void escapar() {
if (aPredators.size > 0) {
for (Vector2 v2 : aPredators) {
float qX = v2.x;
float qY = v2.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
var cosX = Dx / h;
var senY = Dy / h;
var fh = 100 / (h);
direction.x = direction.x + (cosX * fh / 1);
direction.y = direction.y + (senY * fh / 1);
// System.out.println("Objetos vistos: "+ aObjetos.size);
}
}
if (direction.x > 10) {
direction.x = 10;
}
if (direction.x < -10) {
direction.x = -10;
}
if (direction.y > 10) {
direction.y = 10;
}
if (direction.y < -10) {
direction.y = -10;
}
// System.out.println("dirX: "+direccion.x + " dirY: "+ direccion.y);
}
public void buscarHembra() {
if (seconds >= timeMitosis / 1000 && (biomass / capacity) > 0.8) { // el
// macho
// tiene
// que
// estar
// maduro
if (aFemales.size > 0) {
int size = aFemales.size;
for (var i = size - 1; i > 0; i--) {
Organism or = aFemales.get(i);
if (or.seconds >= timeMitosis / 1000) {// la hembra tien
// que estar
// maduro
float qX = or.position.x;
float qY = or.position.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
var cosX = Dx / h;
var senY = Dy / h;
var fh = or.pheromone / (h);
direction.x = direction.x - (cosX * fh / 1);
direction.y = direction.y - (senY * fh / 1);
}
if (direction.x > 10) {
direction.x = 10;
}
if (direction.x < -10) {
direction.x = -10;
}
if (direction.y > 10) {
direction.y = 10;
}
if (direction.y < -10) {
direction.y = -10;
}
}
}
}
}
public void cazarObjetos() {
if (capacity > 0 && (100 * biomass) / capacity < 80) {
if (aObjects.size > 0) {
for (Vector2 v2 : aObjects) {
float qX = v2.x;
float qY = v2.y;
float Dx = position.x - qX;
float Dy = position.y - qY;
var h = (float) Math.sqrt((Dy * Dy) + (Dx * Dx));
var cosX = Dx / h;
var senY = Dy / h;
var fh = 100 / (h);
direction.x = direction.x - (cosX * fh / 1);
direction.y = direction.y - (senY * fh / 1);
// System.out.println("Objetos vistos: "+ aObjetos.size);
}
}
if (direction.x > 10) {
direction.x = 10;
}
if (direction.x < -10) {
direction.x = -10;
}
if (direction.y > 10) {
direction.y = 10;
}
if (direction.y < -10) {
direction.y = -10;
}
}
}
public void enfermar() {//el organismo se enfermó
}
public void morir() {
direction.x = 0;
direction.y = 0;
if (muriendo == 0) {
if (height <= 1 || width <= 1) {
world.borrarOrganismo(this);
}
if (height > 1 && width > 1) {
if (position.x < world.ancho / 2) {// el organismo se encuentra en
// elpanel izquierdo
for (var i = 0; i < world.aqe.size; i++) {
Qenergy qe = world.aqe.get(i);
if (qe.position.x < world.ancho / 2 && !qe.visible) {
if (biomass > world.Qbiomasa) {
qe.visible = true;
qe.update();
biomass = biomass - world.Qbiomasa;
}
if (biomass <= world.Qbiomasa) {
qe.visible = true;
qe.update();
biomass = 0;
}
if (biomass <= 0) {
i = world.aqe.size;
}
}
}
}
if (position.x > world.ancho / 2) {// el organismo se encuentra en
// el panel Derecho
for (var i = 0; i < world.aqe.size; i++) {
Qenergy qe = world.aqe.get(i);
if (qe.position.x > world.ancho / 2 && !qe.visible) {
if (biomass > world.QbiomasaR) {
qe.visible = true;
// qe.posicion.x= this.posicion.x;
// qe.posicion.y= this.posicion.y;
qe.update();
biomass = biomass - world.Qbiomasa;
qe.mass = world.QbiomasaR;
}
if (biomass <= world.QbiomasaR) {
qe.visible = true;
qe.mass = world.QbiomasaR;
qe.update();
biomass = 0;
}
if (biomass <= 0) {
i = world.aqe.size;
}
}
}
}
}
}
world.borrarOrganismo(this);
}
public void intoxicado() {
if (world.antibiotico == 1 && !this.resistanceATB) {
intoxicated = true;
}
if (intoxicated = true) {
this.contadorTiempoToxico();
}
if (seconds2 > 4) {
morir();
}
}
public void enfermedad() {//evolucion de la enfermedad
//this.contadorTiempoEnfermo();
//if (segundos3 > 10) {
///int random = (int) (Math.random()*100);//lo dejamos a la suerte
// if(random <= m.virus.mortalidad) {morir();} //se muere
// if(random > m.virus.mortalidad) {infectado = false; inmune=true;}//vive y queda inmune
//}
}
public void apoptosis() {
if (seconds >= longevity / 1000) {
morir();
}
}
// determina la distribucion de alelos
public void crossOver() {
var cross = false;
int chance;
var buffer = new StringBuffer();
var i = world.gap1 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap1 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch2.resistanceATB.toString());
ch2.resistanceATB.replace(0, ch2.resistanceATB.length(),
ch3.resistanceATB.toString());
ch3.resistanceATB.replace(0, ch3.resistanceATB.length(),
buffer.toString());
}
i = world.gap2 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap2 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch2.resistanceATB.toString());
ch2.resistanceATB.replace(0, ch2.resistanceATB.length(),
ch3.resistanceATB.toString());
ch3.resistanceATB.replace(0, ch3.resistanceATB.length(),
buffer.toString());
buffer.replace(0, buffer.length(), ch2.width.toString());
ch2.width.replace(0, ch2.width.length(), ch3.width.toString());
ch3.width.replace(0, ch3.width.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch2.height.toString());
ch2.height.replace(0, ch2.height.length(), ch3.height.toString());
ch3.height.replace(0, ch3.height.length(), buffer.toString());
}
i = world.gap3 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap3 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch2.resistanceATB.toString());
ch2.resistanceATB.replace(0, ch2.resistanceATB.length(),
ch3.resistanceATB.toString());
ch3.resistanceATB.replace(0, ch3.resistanceATB.length(),
buffer.toString());
buffer.replace(0, buffer.length(), ch2.width.toString());
ch2.width.replace(0, ch2.width.length(), ch3.width.toString());
ch3.width.replace(0, ch3.width.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch2.height.toString());
ch2.height.replace(0, ch2.height.length(), ch3.height.toString());
ch3.height.replace(0, ch3.height.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch2.sense.toString());
ch2.sense.replace(0, ch2.sense.length(), ch3.sense.toString());
ch3.sense.replace(0, ch3.sense.length(), buffer.toString());
}
i = world.gap4 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap4 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch2.resistanceATB.toString());
ch2.resistanceATB.replace(0, ch2.resistanceATB.length(),
ch3.resistanceATB.toString());
ch3.resistanceATB.replace(0, ch3.resistanceATB.length(),
buffer.toString());
buffer.replace(0, buffer.length(), ch2.width.toString());
ch2.width.replace(0, ch2.width.length(), ch3.width.toString());
ch3.width.replace(0, ch3.width.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch2.height.toString());
ch2.height.replace(0, ch2.height.length(), ch3.height.toString());
ch3.height.replace(0, ch3.height.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch2.sense.toString());
ch2.sense.replace(0, ch2.sense.length(), ch3.sense.toString());
ch3.sense.replace(0, ch3.sense.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch2.toleranceTemp.toString());
ch2.toleranceTemp.replace(0, ch2.toleranceTemp.length(),
ch3.toleranceTemp.toString());
ch3.toleranceTemp.replace(0, ch3.toleranceTemp.length(),
buffer.toString());
}
i = world.gap6 * 2;
i--;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap6 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch6.speed.toString());
ch6.speed.replace(0, ch6.speed.length(), ch7.speed.toString());
ch7.speed.replace(0, ch7.speed.length(), buffer.toString());
}
i = world.gap7 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap7 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch6.speed.toString());
ch6.speed.replace(0, ch6.speed.length(), ch7.speed.toString());
ch7.speed.replace(0, ch7.speed.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.hunt.toString());
ch6.hunt.replace(0, ch6.hunt.length(), ch7.hunt.toString());
ch7.hunt.replace(0, ch7.hunt.length(), buffer.toString());
}
i = world.gap8 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap8 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch6.speed.toString());
ch6.speed.replace(0, ch6.speed.length(), ch7.speed.toString());
ch7.speed.replace(0, ch7.speed.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.hunt.toString());
ch6.hunt.replace(0, ch6.hunt.length(), ch7.hunt.toString());
ch7.hunt.replace(0, ch7.hunt.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.escape.toString());
ch6.escape
.replace(0, ch6.escape.length(), ch7.escape.toString());
ch7.escape.replace(0, ch7.escape.length(), buffer.toString());
}
i = world.gap9 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap9 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch6.speed.toString());
ch6.speed.replace(0, ch6.speed.length(), ch7.speed.toString());
ch7.speed.replace(0, ch7.speed.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.hunt.toString());
ch6.hunt.replace(0, ch6.hunt.length(), ch7.hunt.toString());
ch7.hunt.replace(0, ch7.hunt.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.escape.toString());
ch6.escape
.replace(0, ch6.escape.length(), ch7.escape.toString());
ch7.escape.replace(0, ch7.escape.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.radius.toString());
ch6.radius.replace(0, ch6.radius.length(),
ch7.radius.toString());
ch7.radius.replace(0, ch7.radius.length(),
buffer.toString());
}
i = world.gap92 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap92 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch6.speed.toString());
ch6.speed.replace(0, ch6.speed.length(), ch7.speed.toString());
ch7.speed.replace(0, ch7.speed.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.hunt.toString());
ch6.hunt.replace(0, ch6.hunt.length(), ch7.hunt.toString());
ch7.hunt.replace(0, ch7.hunt.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.escape.toString());
ch6.escape
.replace(0, ch6.escape.length(), ch7.escape.toString());
ch7.escape.replace(0, ch7.escape.length(), buffer.toString());
buffer.replace(0, buffer.length(), ch6.radius.toString());
ch6.radius.replace(0, ch6.radius.length(),
ch7.radius.toString());
ch7.radius.replace(0, ch7.radius.length(),
buffer.toString());
buffer.replace(0, buffer.length(), ch6.pheromone.toString());
ch6.pheromone.replace(0, ch6.pheromone.length(),
ch7.pheromone.toString());
ch7.pheromone.replace(0, ch7.pheromone.length(), buffer.toString());
}
// cromosomas 3
i = world.gap10 * 2;
if (!male) {
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap10 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch10.mutationRate.toString());
ch10.mutationRate.replace(0, ch10.mutationRate.length(),
ch11.mutationRate.toString());
ch11.mutationRate.replace(0, ch11.mutationRate.length(),
buffer.toString());
}
i = world.gap11 * 2;
cross = false;
chance = (int) (Math.random() * 100);
if (chance < world.gap11 * 2) {
cross = true;
}
if (cross) {
buffer.replace(0, buffer.length(), ch10.mutationRate.toString());
ch10.mutationRate.replace(0, ch10.mutationRate.length(),
ch11.mutationRate.toString());
ch11.mutationRate.replace(0, ch11.mutationRate.length(),
buffer.toString());
buffer.replace(0, buffer.length(), ch10.longevity.toString());
ch10.longevity.replace(0, ch10.longevity.length(),
ch11.longevity.toString());
ch11.longevity.replace(0, ch11.longevity.length(),
buffer.toString());
}
}
}
public void replication() {
if (world.mutarResistencia) {
ch1.resistanceATB.replace(0, ch1.resistanceATB.length(),
replicar(adn.resistanceATB));
ch2.resistanceATB.replace(0, ch2.resistanceATB.length(),
replicar(adn.resistanceATB));
ch3.resistanceATB.replace(0, ch3.resistanceATB.length(),
replicar(adn2.resistanceATB));
ch4.resistanceATB.replace(0, ch4.resistanceATB.length(),
replicar(adn2.resistanceATB));
}
if (world.mutarSize) {
ch1.width.replace(0, ch1.width.length(), replicar(adn.width));
ch2.width.replace(0, ch2.width.length(), replicar(adn.width));
ch3.width.replace(0, ch3.width.length(), replicar(adn2.width));
ch4.width.replace(0, ch4.width.length(), replicar(adn2.width));
}
if (world.mutarSize) {
ch1.height.replace(0, ch1.height.length(), replicar(adn.height));
ch2.height.replace(0, ch2.height.length(), replicar(adn.height));
ch3.height.replace(0, ch3.height.length(), replicar(adn2.height));
ch4.height.replace(0, ch4.height.length(), replicar(adn2.height));
}
if (world.mutarSpeed) {
ch5.speed.replace(0, ch5.speed.length(), replicar(adn3.speed));
ch6.speed.replace(0, ch6.speed.length(), replicar(adn3.speed));
ch7.speed.replace(0, ch7.speed.length(), replicar(adn4.speed));
ch8.speed.replace(0, ch8.speed.length(), replicar(adn4.speed));
}
if (world.mutarTemp) {
ch1.toleranceTemp.replace(0, ch1.toleranceTemp.length(),
replicar(adn.toleranceTemp));
ch2.toleranceTemp.replace(0, ch2.toleranceTemp.length(),
replicar(adn.toleranceTemp));
ch3.toleranceTemp.replace(0, ch3.toleranceTemp.length(),
replicar(adn2.toleranceTemp));
ch4.toleranceTemp.replace(0, ch4.toleranceTemp.length(),
replicar(adn2.toleranceTemp));
}
if (world.mutarPredador) {
ch1.predator.replace(0, ch1.predator.length(),
replicar(adn.predator));
ch2.predator.replace(0, ch2.predator.length(),
replicar(adn.predator));
ch3.predator.replace(0, ch3.predator.length(),
replicar(adn2.predator));
ch4.predator.replace(0, ch4.predator.length(),
replicar(adn2.predator));
}
if (world.mutarSentir) {
ch1.sense.replace(0, ch1.sense.length(), replicar(adn.sense));
ch2.sense.replace(0, ch2.sense.length(), replicar(adn.sense));
ch3.sense.replace(0, ch3.sense.length(), replicar(adn2.sense));
ch4.sense.replace(0, ch4.sense.length(), replicar(adn2.sense));
}
if (world.mutarCazar) {
ch5.hunt.replace(0, ch5.hunt.length(), replicar(adn3.hunt));
ch6.hunt.replace(0, ch6.hunt.length(), replicar(adn3.hunt));
ch7.hunt.replace(0, ch7.hunt.length(), replicar(adn4.hunt));
ch8.hunt.replace(0, ch8.hunt.length(), replicar(adn4.hunt));
}
if (world.mutarEscapar) {
ch5.escape
.replace(0, ch5.escape.length(), replicar(adn3.escape));
ch6.escape
.replace(0, ch6.escape.length(), replicar(adn3.escape));
ch7.escape
.replace(0, ch7.escape.length(), replicar(adn4.escape));
ch8.escape
.replace(0, ch8.escape.length(), replicar(adn4.escape));
}
if (world.mutarRadioconsiente) {
ch5.radius.replace(0, ch5.radius.length(),
replicar(adn3.radius));
ch6.radius.replace(0, ch6.radius.length(),
replicar(adn3.radius));
ch7.radius.replace(0, ch7.radius.length(),
replicar(adn4.radius));
ch8.radius.replace(0, ch8.radius.length(),
replicar(adn4.radius));
}
if (world.mutarFeromona) {
ch5.pheromone.replace(0, ch5.pheromone.length(),
replicar(adn3.pheromone));
ch6.pheromone.replace(0, ch6.pheromone.length(),
replicar(adn3.pheromone));
ch7.pheromone.replace(0, ch7.pheromone.length(),
replicar(adn4.pheromone));
ch8.pheromone.replace(0, ch8.pheromone.length(),
replicar(adn4.pheromone));
}
if (world.mutarParteNoGen) {
ch5.parteNoGen.replace(0, ch5.parteNoGen.length(),
replicar(adn3.parteNoGen));
ch6.parteNoGen.replace(0, ch6.parteNoGen.length(),
replicar(adn3.parteNoGen));
ch7.parteNoGen.replace(0, ch7.parteNoGen.length(),
replicar(adn4.parteNoGen));
ch8.parteNoGen.replace(0, ch8.parteNoGen.length(),
replicar(adn4.parteNoGen));
}
if (world.mutarTasaMut) {
ch9.mutationRate.replace(0, ch9.mutationRate.length(),
replicar(adn5.mutationRate));
ch10.mutationRate.replace(0, ch10.mutationRate.length(),
replicar(adn5.mutationRate));
if (!male) {
ch11.mutationRate.replace(0, ch11.mutationRate.length(),
replicar(adn6.mutationRate));
ch12.mutationRate.replace(0, ch12.mutationRate.length(),
replicar(adn6.mutationRate));
}
}
if (world.mutarLongevidad) {
ch9.longevity.replace(0, ch9.longevity.length(),
replicar(adn5.longevity));
ch10.longevity.replace(0, ch10.longevity.length(),
replicar(adn5.longevity));
if (!male) {
ch11.longevity.replace(0, ch11.longevity.length(),
replicar(adn6.longevity));
ch12.longevity.replace(0, ch12.longevity.length(),
replicar(adn6.longevity));
}
}
if (world.mutarColor) {
ch9.color.replace(0, ch9.color.length(), replicar(adn5.color));
ch10.color.replace(0, ch10.color.length(), replicar(adn5.color));
if (!male) {
ch11.color
.replace(0, ch11.color.length(), replicar(adn6.color));
ch12.color
.replace(0, ch12.color.length(), replicar(adn6.color));
}
}
if (!world.mutarResistencia) {
ch1.resistanceATB.replace(0, ch1.resistanceATB.length(),
adn.resistanceATB.toString());
ch2.resistanceATB.replace(0, ch2.resistanceATB.length(),
adn.resistanceATB.toString());
ch3.resistanceATB.replace(0, ch3.resistanceATB.length(),
adn2.resistanceATB.toString());
ch4.resistanceATB.replace(0, ch4.resistanceATB.length(),
adn2.resistanceATB.toString());
}
if (!world.mutarSize) {
ch1.width.replace(0, ch1.width.length(), adn.width.toString());
ch2.width.replace(0, ch2.width.length(), adn.width.toString());
ch3.width.replace(0, ch3.width.length(), adn2.width.toString());
ch4.width.replace(0, ch4.width.length(), adn2.width.toString());
}
if (!world.mutarSize) {
ch1.height.replace(0, ch1.height.length(), adn.height.toString());
ch2.height.replace(0, ch2.height.length(), adn.height.toString());
ch3.height.replace(0, ch3.height.length(), adn2.height.toString());
ch4.height.replace(0, ch4.height.length(), adn2.height.toString());
}
if (!world.mutarTemp) {
ch1.toleranceTemp.replace(0, ch1.toleranceTemp.length(),
adn.toleranceTemp.toString());
ch2.toleranceTemp.replace(0, ch2.toleranceTemp.length(),
adn.toleranceTemp.toString());
ch3.toleranceTemp.replace(0, ch3.toleranceTemp.length(),
adn2.toleranceTemp.toString());
ch4.toleranceTemp.replace(0, ch4.toleranceTemp.length(),
adn2.toleranceTemp.toString());
}
if (!world.mutarPredador) {
ch1.predator.replace(0, ch1.predator.length(),
adn.predator.toString());
ch2.predator.replace(0, ch2.predator.length(),
adn.predator.toString());
ch3.predator.replace(0, ch3.predator.length(),
adn2.predator.toString());
ch4.predator.replace(0, ch4.predator.length(),
adn2.predator.toString());
}
if (!world.mutarSentir) {
ch1.sense.replace(0, ch1.sense.length(), adn.sense.toString());
ch2.sense.replace(0, ch2.sense.length(), adn.sense.toString());
ch3.sense.replace(0, ch3.sense.length(), adn2.sense.toString());
ch4.sense.replace(0, ch4.sense.length(), adn2.sense.toString());
}
if (!world.mutarSpeed) {
ch5.speed.replace(0, ch5.speed.length(), adn3.speed.toString());
ch6.speed.replace(0, ch6.speed.length(), adn3.speed.toString());
ch7.speed.replace(0, ch7.speed.length(), adn4.speed.toString());
ch8.speed.replace(0, ch8.speed.length(), adn4.speed.toString());
}
if (!world.mutarCazar) {
ch5.hunt.replace(0, ch5.hunt.length(), adn3.hunt.toString());
ch6.hunt.replace(0, ch6.hunt.length(), adn3.hunt.toString());
ch7.hunt.replace(0, ch7.hunt.length(), adn4.hunt.toString());
ch8.hunt.replace(0, ch8.hunt.length(), adn4.hunt.toString());
}
if (!world.mutarEscapar) {
ch5.escape.replace(0, ch5.escape.length(),
adn3.escape.toString());
ch6.escape.replace(0, ch6.escape.length(),
adn3.escape.toString());
ch7.escape.replace(0, ch7.escape.length(),
adn4.escape.toString());
ch8.escape.replace(0, ch8.escape.length(),
adn4.escape.toString());
}
if (!world.mutarRadioconsiente) {
ch5.radius.replace(0, ch5.radius.length(),
adn3.radius.toString());
ch6.radius.replace(0, ch6.radius.length(),
adn3.radius.toString());
ch7.radius.replace(0, ch7.radius.length(),
adn4.radius.toString());
ch8.radius.replace(0, ch8.radius.length(),
adn4.radius.toString());
}
if (!world.mutarFeromona) {
ch5.pheromone.replace(0, ch5.pheromone.length(),
adn3.pheromone.toString());
ch6.pheromone.replace(0, ch6.pheromone.length(),
adn3.pheromone.toString());
ch7.pheromone.replace(0, ch7.pheromone.length(),
adn4.pheromone.toString());
ch8.pheromone.replace(0, ch8.pheromone.length(),
adn4.pheromone.toString());
}
if (!world.mutarParteNoGen) {
ch5.parteNoGen.replace(0, ch5.parteNoGen.length(),
adn3.parteNoGen.toString());
ch6.parteNoGen.replace(0, ch6.parteNoGen.length(),
adn3.parteNoGen.toString());
ch7.parteNoGen.replace(0, ch7.parteNoGen.length(),
adn4.parteNoGen.toString());
ch8.parteNoGen.replace(0, ch8.parteNoGen.length(),
adn4.parteNoGen.toString());
}
if (!world.mutarTasaMut) {
ch9.mutationRate.replace(0, ch9.mutationRate.length(),
adn5.mutationRate.toString());
ch10.mutationRate.replace(0, ch10.mutationRate.length(),
adn5.mutationRate.toString());
if (!male) {
ch11.mutationRate.replace(0, ch11.mutationRate.length(),
adn6.mutationRate.toString());
ch12.mutationRate.replace(0, ch12.mutationRate.length(),
adn6.mutationRate.toString());
}
}
if (!world.mutarLongevidad) {
ch9.longevity.replace(0, ch9.longevity.length(),
adn5.longevity.toString());
ch10.longevity.replace(0, ch10.longevity.length(),
adn5.longevity.toString());
if (!male) {
ch11.longevity.replace(0, ch11.longevity.length(),
adn6.longevity.toString());
ch12.longevity.replace(0, ch12.longevity.length(),
adn6.longevity.toString());
}
}
if (!world.mutarColor) {
ch9.color.replace(0, ch9.color.length(), adn5.color.toString());
ch10.color.replace(0, ch10.color.length(), adn5.color.toString());
if (!male) {
ch11.color.replace(0, ch11.color.length(),
adn6.color.toString());
ch12.color.replace(0, ch12.color.length(),
adn6.color.toString());
}
}
}
public void gametoGenesis() {// coping the genome
replication();
crossOver();
}
public Genome randomCigoto() {
var cigoto = new Genome(world, 1, 1, 1, 0, 0, 0);
var a = (int) (Math.random() * 2000);
if (a <= 500) {
cigoto = ch1;
}
if (a > 500 && a <= 1000) {
cigoto = ch4;
}
if (a > 1000 && a <= 1500) {
cigoto = ch3;
}
if (a > 1500 && a <= 2000) {
cigoto = ch2;
}
return cigoto;
}
public Genome randomCigoto2() {
var cigoto = new Genome(world, 0, 0, 0, 0, 0, 0);
var a = (int) (Math.random() * 2000);
if (a <= 500) {
cigoto = ch5;
}
if (a > 500 && a <= 1000) {
cigoto = ch8;
}
if (a > 1000 && a <= 1500) {
cigoto = ch7;
}
if (a > 1500 && a <= 2000) {
cigoto = ch6;
}
return cigoto;
}
public Genome randomCigoto3() {
var cigoto = new Genome(world, 0, 0, 0);
var a = (int) (Math.random() * 2000);
if (!male) {
if (a <= 500) {
cigoto = ch9;
}
if (a > 500 && a <= 1000) {
cigoto = ch12;
}
if (a > 1000 && a <= 1500) {
cigoto = ch11;
}
if (a > 1500 && a <= 2000) {
cigoto = ch10;
}
}
if (male) {
if (a <= 1000) {
cigoto = ch9;
}
if (a > 1000 && a <= 2000) {
cigoto = ch10;
}
}
return cigoto;
}
// Fecundacion
public void Fecundation(Organism o1, Organism o2) {
var frac = o1.Identificar(world) / o2.Identificar(world);
if (frac > 1) {
frac = 1 / frac;
}
var masatotal = (int) (world.BiomasaTotal(world.organisms) + world.MateriaLibre());
if (o1.capacity > 1 && o2.capacity > 1
&& o1.carnivore == o2.carnivore && world.organisms.size < world.maximo
&& masatotal <= (world.Masatotal + 100)) {
if (o1.biomass > o1.capacity / 2 && o2.biomass > o2.capacity / 2) {
o1.gametoGenesis();
o2.gametoGenesis();
var sb = new StringBuffer(o1.nombre.toString());
var sb2 = new StringBuffer(o1.nombre.toString());
var sb3 = new StringBuffer(o2.nombre.toString());
var sb4 = new StringBuffer(o2.nombre.toString());
var pos = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
var x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir = new Vector2(seno, coseno);
var pos2 = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir2 = new Vector2(seno, coseno);
var pos3 = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir3 = new Vector2(seno, coseno);
var pos4 = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir4 = new Vector2(seno, coseno);
var sex = true;
var gen = (int) (Math.random() * 999);
if (gen < 500) {
sex = true;
}
if (gen >= 500) {
sex = false;
}
var h1 = new Organism(sex, o1.randomCigoto(),
o2.randomCigoto(), o1.randomCigoto2(),
o2.randomCigoto2(), o1.randomCigoto3(),
o2.randomCigoto3(), pos, sb, world);
h1.male = sex;
h1.direction = dir;
h1.energy = o1.energy / 5;
h1.biomass = o1.biomass / 5;
gen = (int) (Math.random() * 999);
if (gen < 500) {
sex = true;
}
if (gen >= 500) {
sex = false;
}
var h2 = new Organism(sex, o1.randomCigoto(),
o2.randomCigoto(), o1.randomCigoto2(),
o2.randomCigoto2(), o1.randomCigoto3(),
o2.randomCigoto3(), pos2, sb2, world);
h2.male = sex;
h2.direction = dir2;
h2.energy = o1.energy / 5;
h2.biomass = o1.biomass / 5;
gen = (int) (Math.random() * 999);
if (gen < 500) {
sex = true;
}
if (gen >= 500) {
sex = false;
}
var h3 = new Organism(sex, o1.randomCigoto(),
o2.randomCigoto(), o1.randomCigoto2(),
o2.randomCigoto2(), o1.randomCigoto3(),
o2.randomCigoto3(), pos3, sb3, world);
h3.direction = dir3;
h3.energy = o2.energy / 5;
h3.biomass = o2.biomass / 5;
gen = (int) (Math.random() * 999);
if (gen < 500) {
sex = true;
}
if (gen >= 500) {
sex = false;
}
var h4 = new Organism(sex, o1.randomCigoto(),
o2.randomCigoto(), o1.randomCigoto2(),
o2.randomCigoto2(), o1.randomCigoto3(),
o2.randomCigoto3(), pos4, sb4, world);
h4.male = sex;
h4.direction = dir4;
h4.energy = o2.energy / 5;
h4.biomass = o2.biomass / 5;
o1.energy = o1.energy / 5; // la hembra paga elcosto
// energetico
o1.biomass = o1.biomass / 5;
world.organisms.add(h1);
world.organisms.add(h2);
world.organisms.add(h3);
world.organisms.add(h4);
}
}
}
public void ReproduccionParteNoGen(Organism o1) {// Con cortejo
var masatotal = (int) (world.BiomasaTotal(world.organisms) + world.MateriaLibre());
if (o1.capacity > 1 && world.organisms.size < world.maximo
&& masatotal <= (world.Masatotal + 100)) {
if (o1.biomass > o1.capacity / 2) {
o1.gametoGenesis();
var sb = new StringBuffer(o1.nombre.toString());
var sb2 = new StringBuffer(o1.nombre.toString());
var pos = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
var x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir = new Vector2(seno, coseno);
var pos2 = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir2 = new Vector2(seno, coseno);
var h1 = new Organism(o1.male, o1.randomCigoto(),
o1.randomCigoto(), o1.randomCigoto2(),
o1.randomCigoto2(), o1.randomCigoto3(),
o1.randomCigoto3(), pos, sb, world);
h1.direction = dir;
h1.energy = o1.energy / 5;
h1.biomass = o1.biomass / 5;
var h2 = new Organism(o1.male, o1.randomCigoto(),
o1.randomCigoto(), o1.randomCigoto2(),
o1.randomCigoto2(), o1.randomCigoto3(),
o1.randomCigoto3(), pos2, sb2, world);
h2.direction = dir2;
h2.energy = o1.energy / 5;
h2.biomass = o1.biomass / 5;
o1.energy = o1.energy / 5;
o1.biomass = o1.biomass / 5;
world.organisms.add(h1);
world.organisms.add(h2);
o1.timeCycle = 0;
}
}
}
public void ReproduccionParteNoGenSinCortejo(Organism o1) {// Sin cortejo
var masatotal = (int) (world.BiomasaTotal(world.organisms) + world.MateriaLibre());
if (o1.capacity > 1 && world.organisms.size < world.maximo
&& masatotal <= (world.Masatotal + 100)) {
if (o1.biomass > o1.capacity / 2) {
o1.gametoGenesis();
var sb = new StringBuffer(o1.nombre.toString());
var sb2 = new StringBuffer(o1.nombre.toString());
var pos = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
var x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir = new Vector2(seno, coseno);
var pos2 = new Vector2((float) position.x + ((width) + 3)
/ 2, (float) position.y);
x = (float) Math.random() * 360;
seno = (float) Math.sin(x) * 10;
coseno = (float) Math.sin(x + 3.1416 / 2) * 10;
var dir2 = new Vector2(seno, coseno);
var h1 = new Organism(o1.male, o1.randomCigoto(),
o1.randomCigoto(), o1.randomCigoto2(),
o1.randomCigoto2(), o1.randomCigoto3(),
o1.randomCigoto3(), pos, sb, world);
h1.direction = dir;
h1.energy = o1.energy / 5;
h1.biomass = o1.biomass / 5;
var h2 = new Organism(o1.male, o1.randomCigoto(),
o1.randomCigoto(), o1.randomCigoto2(),
o1.randomCigoto2(), o1.randomCigoto3(),
o1.randomCigoto3(), pos2, sb2, world);
h2.direction = dir2;
h2.energy = o1.energy / 5;
h2.biomass = o1.biomass / 5;
o1.energy = o1.energy / 5;
o1.biomass = o1.biomass / 5;
world.organisms.add(h1);
o1.timeCycle = 0;
}
}
}
// mide los segundos transcurrido desde su creación
public void contadorTiempo() {
if (delta2Time() > msecondTime(1000)) {
seconds = seconds + 1;
timeCycle = timeCycle + 1;
setDelta();
}
}
public void contadorTiempoEnfermo() {
if (deltaEnfermo() > msecondTime(1000)) {
seconds3 = seconds3 + 1;
setDeltaEnfermo();
}
}
public void contadorTiempoToxico() {
if (deltaToxico() > msecondTime(1000)) {
seconds2 = seconds2 + 1;
setDeltaToxico();
}
}
// mide el tiempo transcurrido desde el unltimo set
public long deltaTime() {
return TimeUtils.nanoTime() - delta;
}
public long edadTime() {
return TimeUtils.nanoTime() - edad;
}
public long delta2Time() {
return TimeUtils.nanoTime() - delta2;
}
public long deltaToxico() {
return TimeUtils.nanoTime() - deltaToxico;
}
public long deltaEnfermo() {
return TimeUtils.nanoTime() - deltaEnfermo;
}
public long delta3Time() {
return TimeUtils.nanoTime() - delta3;
}
// anota el tiempo de juego transcurrido en el momento que se invoca un
// evento
public void setTime() {
delta = TimeUtils.nanoTime();
}
public void setEdad() {
edad = TimeUtils.nanoTime();
}
public void setDelta() {
delta2 = TimeUtils.nanoTime();
}
public void setDeltaToxico() {
deltaToxico = TimeUtils.nanoTime();
}
public void setDeltaEnfermo() {
deltaEnfermo = TimeUtils.nanoTime();
}
public void setDelta3() {
delta3 = TimeUtils.nanoTime();
}
// convierte de ms a nanosegundos para mas comodidad
public long msecondTime(long ms) {
return ms * 1000000;
}
public String replicar(StringBuffer str) {
for (var ei = 0; ei < str.length(); ei++) {// se recorre toada la
// longitud edl gen letra
// por letra
// obtenemos la letra de una posicion determinada
base = str.charAt(ei);
// tiramos los dados
var a = 0;
if (mutable) {
a = (int) (Math.random() * mutationRate);
}
if (!mutable) {
a = 100;
}
if (a <= 1) {// se produce una mutacion
var b = (int) (Math.random() * 1000);
if (b > 10) {
// sustitucion
var c = (int) (Math.random() * 40);
if (c <= 10) {
c = 0;
}
if (c > 10 && c <= 20) {
c = 1;
}
if (c > 20 && c <= 30) {
c = 2;
}
if (c > 30 && c <= 40) {
c = 3;
}
switch (c) {
case 0:
str.setCharAt(ei, 'a');
break;
case 1:
str.setCharAt(ei, 'c');
break;
case 2:
str.setCharAt(ei, 'g');
break;
case 3:
str.setCharAt(ei, 't');
break;
}
}
if (b <= 10) { // delecion o insercion
var e = (int) (Math.random() * 81);
if (e > 0 && e <= 10) {
e = 0;
}
if (e > 10 && e <= 20) {
e = 1;
}
if (e > 20 && e <= 30) {
e = 2;
}
if (e > 30 && e <= 40) {
e = 3;
}
if (e > 40 && e <= 50) {
e = 4;
}
if (e > 50 && e <= 60) {
e = 5;
}
if (e > 60 && e <= 70) {
e = 6;
}
if (e > 70 && e <= 80) {
e = 7;
}
if (e == 0) {
e = 8;
}
if (e == 81) {
e = 9;
}
switch (e) {
case 0:
str.insert(ei, "a");
break;
case 1:
str.insert(ei, "c");
break;
case 2:
str.insert(ei, "g");
break;
case 3:
str.insert(ei, "t");
break;
case 4:
str.deleteCharAt(ei);
break;
case 5:
str.deleteCharAt(ei);
break;
case 6:
str.deleteCharAt(ei);
break;
case 7:
str.deleteCharAt(ei);
break;
case 8:
str.replace(0, str.length(), " ");
ei = str.length();
break;
case 9:
str.append("aaaaaa").append(str);
break;
}
}
}
}
return str.toString();
}
@Override
public String toString() {
return nombre.toString();
}
@Override
public int compareTo(Organism arg0) {
{
// The order of two Organism's is determined by the name.
var p2Name = arg0.phenotype.name;
// or any positive int
return Integer.compare(0, phenotype.name.compareTo(p2Name)); // or any negative int
}
}
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