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Microplate library for parsing wet lab data.
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/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
*/
/*--------------------------- Package Declaration ----------------------------*/
package com.github.jessemull.microflexbiginteger.io;
/*------------------------------- Dependencies -------------------------------*/
import java.util.ArrayList;
import java.util.List;
import com.github.jessemull.microflexbiginteger.plate.Well;
import com.github.jessemull.microflexbiginteger.plate.WellSet;
/**
* This is a wrapper class for importing or exporting a JSON encoded well set object.
*
* @author Jesse L. Mull
* @update Updated Oct 17, 2016
* @address http://www.jessemull.com
* @email [email protected]
*/
public class WellSetPOJO {
/*---------------------------- Private fields ----------------------------*/
private String type; // Data set type
private String label; // The set label
private int size; // Size of the data set
private List wells =
new ArrayList(); // List of set wells
/*----------------------------- Constructors -----------------------------*/
public WellSetPOJO(){}
/**
* Creates a well set POJO from a well set object.
* @param WellSet the well set object
*/
public WellSetPOJO(WellSet set) {
this.label = set.label();
this.size = set.size();
this.type = "BigInteger";
for(Well well : set) {
wells.add(new SimpleWellPOJO(well));
}
}
/*------------------------- Getters and setters --------------------------*/
/**
* Sets the size.
* @param String the numerical type
*/
public void setSize(int size) {
this.size = size;
}
/**
* Sets the list of set wells.
* @param List the list of set wells
*/
public void setWells(List wells) {
this.wells = wells;
}
/**
* Sets the label.
* @param String the set label
*/
public void setLabel(String label) {
this.label = label;
}
/**
* Sets the data type.
* @param String the data type
*/
public void setType(String type) {
this.type = type;
}
/**
* Returns the size of the values array.
* @return the size of the values array
*/
public int getSize() {
return this.size;
}
/**
* Returns the list of set wells.
* @return the list of set wells
*/
public List getWells() {
return this.wells;
}
/**
* Returns the set label.
* @return the set label
*/
public String getLabel() {
return this.label;
}
/**
* Returns the data set type.
* @return the data set type
*/
public String getType() {
return this.type;
}
/**
* Returns a WellSetBigInteger object.
* @return the well set
*/
public WellSet toWellSetObject() {
WellSet set = new WellSet();
set.setLabel(this.label);
for(SimpleWellPOJO well : wells) {
set.add(well.toWellObject());
}
return set;
}
}
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