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JTransforms is the first, open source, multithreaded FFT library written in pure Java. Benchmark results show better performance than FFTW.
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/* ***** BEGIN LICENSE BLOCK *****
* Version: MPL 1.1/GPL 2.0/LGPL 2.1
*
* The contents of this file are subject to the Mozilla Public License Version
* 1.1 (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
* http://www.mozilla.org/MPL/
*
* Software distributed under the License is distributed on an "AS IS" basis,
* WITHOUT WARRANTY OF ANY KIND, either express or implied. See the License
* for the specific language governing rights and limitations under the
* License.
*
* The Original Code is JTransforms.
*
* The Initial Developer of the Original Code is
* Piotr Wendykier, Emory University.
* Portions created by the Initial Developer are Copyright (C) 2007-2009
* the Initial Developer. All Rights Reserved.
*
* Alternatively, the contents of this file may be used under the terms of
* either the GNU General Public License Version 2 or later (the "GPL"), or
* the GNU Lesser General Public License Version 2.1 or later (the "LGPL"),
* in which case the provisions of the GPL or the LGPL are applicable instead
* of those above. If you wish to allow use of your version of this file only
* under the terms of either the GPL or the LGPL, and not to allow others to
* use your version of this file under the terms of the MPL, indicate your
* decision by deleting the provisions above and replace them with the notice
* and other provisions required by the GPL or the LGPL. If you do not delete
* the provisions above, a recipient may use your version of this file under
* the terms of any one of the MPL, the GPL or the LGPL.
*
* ***** END LICENSE BLOCK ***** */
package edu.emory.mathcs.jtransforms.dht;
import edu.emory.mathcs.utils.IOUtils;
/**
* Accuracy check of single precision DHT's
*
* @author Piotr Wendykier ([email protected])
*
*/
public class AccuracyCheckFloatDHT {
private static int[] sizes1D = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 16, 32, 64, 100, 120, 128, 256, 310, 512, 1024, 1056, 2048, 8192, 10158, 16384, 32768, 65536, 131072 };
private static int[] sizes2D = { 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 16, 32, 64, 100, 120, 128, 256, 310, 511, 512, 1024 };
private static int[] sizes3D = { 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 16, 32, 64, 100, 128 };
private static double eps = Math.pow(2, -23);
private AccuracyCheckFloatDHT() {
}
public static void checkAccuracyDHT_1D() {
System.out.println("Checking accuracy of 1D DHT...");
for (int i = 0; i < sizes1D.length; i++) {
FloatDHT_1D dht = new FloatDHT_1D(sizes1D[i]);
double err = 0;
float[] a = new float[sizes1D[i]];
IOUtils.fillMatrix_1D(sizes1D[i], a);
float[] b = new float[sizes1D[i]];
IOUtils.fillMatrix_1D(sizes1D[i], b);
dht.forward(a);
dht.inverse(a, true);
err = computeRMSE(a, b);
if (err > eps) {
System.err.println("\tsize = " + sizes1D[i] + ";\terror = " + err);
} else {
System.out.println("\tsize = " + sizes1D[i] + ";\terror = " + err);
}
a = null;
b = null;
dht = null;
System.gc();
}
}
public static void checkAccuracyDHT_2D() {
System.out.println("Checking accuracy of 2D DHT (float[] input)...");
for (int i = 0; i < sizes2D.length; i++) {
FloatDHT_2D dht2 = new FloatDHT_2D(sizes2D[i], sizes2D[i]);
double err = 0;
float[] a = new float[sizes2D[i] * sizes2D[i]];
IOUtils.fillMatrix_2D(sizes2D[i], sizes2D[i], a);
float[] b = new float[sizes2D[i] * sizes2D[i]];
IOUtils.fillMatrix_2D(sizes2D[i], sizes2D[i], b);
dht2.forward(a);
dht2.inverse(a, true);
err = computeRMSE(a, b);
if (err > eps) {
System.err.println("\tsize = " + sizes2D[i] + " x " + sizes2D[i] + ";\terror = " + err);
} else {
System.out.println("\tsize = " + sizes2D[i] + " x " + sizes2D[i] + ";\terror = " + err);
}
a = null;
b = null;
dht2 = null;
System.gc();
}
System.out.println("Checking accuracy of 2D DHT (float[][] input)...");
for (int i = 0; i < sizes2D.length; i++) {
FloatDHT_2D dht2 = new FloatDHT_2D(sizes2D[i], sizes2D[i]);
double err = 0;
float[][] a = new float[sizes2D[i]][sizes2D[i]];
IOUtils.fillMatrix_2D(sizes2D[i], sizes2D[i], a);
float[][] b = new float[sizes2D[i]][sizes2D[i]];
IOUtils.fillMatrix_2D(sizes2D[i], sizes2D[i], b);
dht2.forward(a);
dht2.inverse(a, true);
err = computeRMSE(a, b);
if (err > eps) {
System.err.println("\tsize = " + sizes2D[i] + " x " + sizes2D[i] + ";\terror = " + err);
} else {
System.out.println("\tsize = " + sizes2D[i] + " x " + sizes2D[i] + ";\terror = " + err);
}
a = null;
b = null;
dht2 = null;
System.gc();
}
}
public static void checkAccuracyDHT_3D() {
System.out.println("Checking accuracy of 3D DHT (float[] input)...");
for (int i = 0; i < sizes3D.length; i++) {
FloatDHT_3D dht3 = new FloatDHT_3D(sizes3D[i], sizes3D[i], sizes3D[i]);
double err = 0;
float[] a = new float[sizes3D[i] * sizes3D[i] * sizes3D[i]];
IOUtils.fillMatrix_3D(sizes3D[i], sizes3D[i], sizes3D[i], a);
float[] b = new float[sizes3D[i] * sizes3D[i] * sizes3D[i]];
IOUtils.fillMatrix_3D(sizes3D[i], sizes3D[i], sizes3D[i], b);
dht3.forward(a);
dht3.inverse(a, true);
err = computeRMSE(a, b);
if (err > eps) {
System.err.println("\tsize = " + sizes3D[i] + " x " + sizes3D[i] + " x " + sizes3D[i] + ";\t\terror = " + err);
} else {
System.out.println("\tsize = " + sizes3D[i] + " x " + sizes3D[i] + " x " + sizes3D[i] + ";\t\terror = " + err);
}
a = null;
b = null;
dht3 = null;
System.gc();
}
System.out.println("Checking accuracy of 3D DHT (float[][][] input)...");
for (int i = 0; i < sizes3D.length; i++) {
FloatDHT_3D dht3 = new FloatDHT_3D(sizes3D[i], sizes3D[i], sizes3D[i]);
double err = 0;
float[][][] a = new float[sizes3D[i]][sizes3D[i]][sizes3D[i]];
IOUtils.fillMatrix_3D(sizes3D[i], sizes3D[i], sizes3D[i], a);
float[][][] b = new float[sizes3D[i]][sizes3D[i]][sizes3D[i]];
IOUtils.fillMatrix_3D(sizes3D[i], sizes3D[i], sizes3D[i], b);
dht3.forward(a);
dht3.inverse(a, true);
err = computeRMSE(a, b);
if (err > eps) {
System.err.println("\tsize = " + sizes3D[i] + " x " + sizes3D[i] + " x " + sizes3D[i] + ";\t\terror = " + err);
} else {
System.out.println("\tsize = " + sizes3D[i] + " x " + sizes3D[i] + " x " + sizes3D[i] + ";\t\terror = " + err);
}
a = null;
b = null;
dht3 = null;
System.gc();
}
}
private static double computeRMSE(float[] a, float[] b) {
if (a.length != b.length) {
throw new IllegalArgumentException("Arrays are not the same size");
}
double rms = 0;
double tmp;
for (int i = 0; i < a.length; i++) {
tmp = (a[i] - b[i]);
rms += tmp * tmp;
}
return Math.sqrt(rms / (float) a.length);
}
private static double computeRMSE(float[][] a, float[][] b) {
if (a.length != b.length || a[0].length != b[0].length) {
throw new IllegalArgumentException("Arrays are not the same size");
}
double rms = 0;
double tmp;
for (int r = 0; r < a.length; r++) {
for (int c = 0; c < a[0].length; c++) {
tmp = (a[r][c] - b[r][c]);
rms += tmp * tmp;
}
}
return Math.sqrt(rms / (a.length * a[0].length));
}
private static double computeRMSE(float[][][] a, float[][][] b) {
if (a.length != b.length || a[0].length != b[0].length || a[0][0].length != b[0][0].length) {
throw new IllegalArgumentException("Arrays are not the same size");
}
double rms = 0;
double tmp;
for (int s = 0; s < a.length; s++) {
for (int r = 0; r < a[0].length; r++) {
for (int c = 0; c < a[0][0].length; c++) {
tmp = (a[s][r][c] - b[s][r][c]);
rms += tmp * tmp;
}
}
}
return Math.sqrt(rms / (a.length * a[0].length * a[0][0].length));
}
public static void main(String[] args) {
checkAccuracyDHT_1D();
checkAccuracyDHT_2D();
checkAccuracyDHT_3D();
System.exit(0);
}
}
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