htsjdk.samtools.util.SamConstants Maven / Gradle / Ivy
/*
* The MIT License
*
* Copyright (c) 2019 The Broad Institute
*
* Permission is hereby granted, free of charge, to any person obtaining a copy
* of this software and associated documentation files (the "Software"), to deal
* in the Software without restriction, including without limitation the rights
* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the Software is
* furnished to do so, subject to the following conditions:
*
* The above copyright notice and this permission notice shall be included in
* all copies or substantial portions of the Software.
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
* IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
* FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
* THE SOFTWARE.
*/
package htsjdk.samtools.util;
/**
* A set of constants defined in the sam-spec (https://github.com/samtools/hts-specs) that need
* to be referenced in code.
*/
public final class SamConstants {
//No need to instantiate this class since all the constants should be static
private SamConstants(){};
/**
* The recommended separator to use when specifying multiple barcodes together in the same tag.
*/
public static final String BARCODE_SEQUENCE_DELIMITER = "-";
/**
* The recommend separator to use when specifying multiple barcode quality scores together in the same tag.
*/
public static final String BARCODE_QUALITY_DELIMITER = " ";
}