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• htsjdk.beta.plugin.HtsCodec

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META-INF.services.htsjdk.beta.plugin.HtsCodec Maven / Gradle / Ivy

# Reference codecs
htsjdk.beta.codecs.hapref.fasta.FASTACodecV1_0

# Reads codecs
htsjdk.beta.codecs.reads.sam.samV1_0.SAMCodecV1_0
htsjdk.beta.codecs.reads.bam.bamV1_0.BAMCodecV1_0
htsjdk.beta.codecs.reads.cram.cramV2_1.CRAMCodecV2_1
htsjdk.beta.codecs.reads.cram.cramV3_0.CRAMCodecV3_0
htsjdk.beta.codecs.reads.htsget.htsgetBAMV1_2.HtsgetBAMCodecV1_2

# Variants codecs
htsjdk.beta.codecs.variants.vcf.vcfv3_2.VCFCodecV3_2
htsjdk.beta.codecs.variants.vcf.vcfv3_3.VCFCodecV3_3
htsjdk.beta.codecs.variants.vcf.vcfv4_0.VCFCodecV4_0
htsjdk.beta.codecs.variants.vcf.vcfv4_1.VCFCodecV4_1
htsjdk.beta.codecs.variants.vcf.vcfv4_2.VCFCodecV4_2
htsjdk.beta.codecs.variants.vcf.vcfv4_3.VCFCodecV4_3