Many resources are needed to download a project. Please understand that we have to compensate our server costs. Thank you in advance. Project price only 1 $
You can buy this project and download/modify it how often you want.
/*
* The MIT License
*
* Copyright (c) 2009 The Broad Institute
*
* Permission is hereby granted, free of charge, to any person obtaining a copy
* of this software and associated documentation files (the "Software"), to deal
* in the Software without restriction, including without limitation the rights
* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the Software is
* furnished to do so, subject to the following conditions:
*
* The above copyright notice and this permission notice shall be included in
* all copies or substantial portions of the Software.
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
* IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
* FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
* THE SOFTWARE.
*/
package htsjdk.samtools.util;
import htsjdk.samtools.Defaults;
import java.io.IOException;
import java.io.OutputStream;
import java.io.Writer;
/**
* Fast (I hope) buffered Writer that converts char to byte merely by casting, rather than charset conversion.
*/
public class AsciiWriter extends Writer {
private final OutputStream os;
// Buffer size has not been tuned.
private final byte[] buffer = new byte[Defaults.NON_ZERO_BUFFER_SIZE];
private int numBytes;
/**
* @param os need not be buffered as this class buffers
*/
public AsciiWriter(final OutputStream os) {
this.os = os;
numBytes = 0;
}
/**
* flushes and closes underlying OutputStream.
*/
@Override
public void close() throws IOException {
flush();
os.close();
}
/**
* flushes underlying OutputStream
*/
@Override
public void flush() throws IOException {
os.write(buffer, 0, numBytes);
numBytes = 0;
os.flush();
}
/**
* All other Writer methods vector through this, so this is the only one that must be overridden.
*/
@Override
public void write(final char[] chars, int offset, int length) throws IOException {
while (length > 0) {
final int charsToConvert = Math.min(length, buffer.length - numBytes);
StringUtil.charsToBytes(chars, offset, charsToConvert, buffer, numBytes);
numBytes += charsToConvert;
offset += charsToConvert;
length -= charsToConvert;
if (numBytes == buffer.length) {
os.write(buffer, 0, numBytes);
numBytes = 0;
}
}
}
}
