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    Download google-genomics-dataflow JAR v1-0.2 with all dependencies


    Google Genomics Dataflow pipelines.

    Files of the artifact google-genomics-dataflow version v1-0.2 from the group com.google.cloud.genomics.

    Test

    Download google-genomics-dataflow (v1-0.2)
    Artifact google-genomics-dataflow
    Group com.google.cloud.genomics
    Version v1-0.2
    Last update 12. May 2016
    Organization Google
    URL https://github.com/googlegenomics/dataflow-java
    License The Apache Software License, Version 2.0
    Dependencies amount 14
    Dependencies google-cloud-dataflow-java-sdk-all, google-api-client, google-oauth-client, google-oauth-client-jetty, google-oauth-client-java6, google-http-client, google-http-client-jackson2, google-api-services-genomics, google-api-services-dataflow, google-genomics-utils, guava, gov.nist.math.jama, reflections, htsjdk,
    There are maybe transitive dependencies!
    There is a newer version: v1-0.8
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    Source code of google-genomics-dataflow version v1-0.2

    META-INF
    META-INF.META-INF.MANIFEST.MF
    com.google.cloud.genomics.dataflow.coders
    com.google.cloud.genomics.dataflow.coders.com.google.cloud.genomics.dataflow.coders.DelegatingAtomicCoder
    com.google.cloud.genomics.dataflow.coders.com.google.cloud.genomics.dataflow.coders.DelegatingStandardCoder
    com.google.cloud.genomics.dataflow.coders.com.google.cloud.genomics.dataflow.coders.GenericJsonCoder
    com.google.cloud.genomics.dataflow.functions
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.BreakFusionTransform
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.GetReferencesFromHeaderFn
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.JoinNonVariantSegmentsWithVariants
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.KeyReadsFn
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.ShardReadsTransform
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.SitesToShards
    com.google.cloud.genomics.dataflow.functions.com.google.cloud.genomics.dataflow.functions.VariantFunctions
    com.google.cloud.genomics.dataflow.functions.ibs
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.AlleleSimilarityCalculator
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.CallSimilarityCalculator
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.CallSimilarityCalculatorFactory
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.FormatIBSData
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.IBSCalculator
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.SharedAllelesRatioCalculator
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.SharedAllelesRatioCalculatorFactory
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.SharedMinorAllelesCalculator
    com.google.cloud.genomics.dataflow.functions.ibs.com.google.cloud.genomics.dataflow.functions.ibs.SharedMinorAllelesCalculatorFactory
    com.google.cloud.genomics.dataflow.functions.pca
    com.google.cloud.genomics.dataflow.functions.pca.com.google.cloud.genomics.dataflow.functions.pca.ExtractSimilarCallsets
    com.google.cloud.genomics.dataflow.functions.pca.com.google.cloud.genomics.dataflow.functions.pca.OutputPCoAFile
    com.google.cloud.genomics.dataflow.functions.pca.com.google.cloud.genomics.dataflow.functions.pca.PCoAnalysis
    com.google.cloud.genomics.dataflow.functions.verifybamid
    com.google.cloud.genomics.dataflow.functions.verifybamid.com.google.cloud.genomics.dataflow.functions.verifybamid.LikelihoodFn
    com.google.cloud.genomics.dataflow.functions.verifybamid.com.google.cloud.genomics.dataflow.functions.verifybamid.ReadFunctions
    com.google.cloud.genomics.dataflow.functions.verifybamid.com.google.cloud.genomics.dataflow.functions.verifybamid.Solver
    com.google.cloud.genomics.dataflow.model
    com.google.cloud.genomics.dataflow.model.com.google.cloud.genomics.dataflow.model.AlleleFreq
    com.google.cloud.genomics.dataflow.model.com.google.cloud.genomics.dataflow.model.PosRgsMq
    com.google.cloud.genomics.dataflow.model.com.google.cloud.genomics.dataflow.model.ReadBaseQuality
    com.google.cloud.genomics.dataflow.model.com.google.cloud.genomics.dataflow.model.ReadBaseWithReference
    com.google.cloud.genomics.dataflow.model.com.google.cloud.genomics.dataflow.model.ReadCounts
    com.google.cloud.genomics.dataflow.model.com.google.cloud.genomics.dataflow.model.ReadQualityCount
    com.google.cloud.genomics.dataflow.pipelines
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.AnnotateVariants
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.CalculateCoverage
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.CountReads
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.DeleteVariants
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.IdentifyPrivateVariants
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.IdentityByState
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.ShardedBAMWriting
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.VariantSimilarity
    com.google.cloud.genomics.dataflow.pipelines.com.google.cloud.genomics.dataflow.pipelines.VerifyBamId
    com.google.cloud.genomics.dataflow.readers
    com.google.cloud.genomics.dataflow.readers.com.google.cloud.genomics.dataflow.readers.GenomicsApiReader
    com.google.cloud.genomics.dataflow.readers.com.google.cloud.genomics.dataflow.readers.ReadGroupStreamer
    com.google.cloud.genomics.dataflow.readers.com.google.cloud.genomics.dataflow.readers.ReadStreamer
    com.google.cloud.genomics.dataflow.readers.com.google.cloud.genomics.dataflow.readers.VariantStreamer
    com.google.cloud.genomics.dataflow.readers.bam
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.BAMIO
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.BAMShard
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.HeaderInfo
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.ReadBAMTransform
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.Reader
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.ReaderOptions
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.SeekableGCSStream
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.Sharder
    com.google.cloud.genomics.dataflow.readers.bam.com.google.cloud.genomics.dataflow.readers.bam.ShardingPolicy
    com.google.cloud.genomics.dataflow.utils
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.AnnotationUtils
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.BAMDiff
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.CallFilters
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.GCSHelper
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.GCSOptions
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.GCSOutputOptions
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.GenomicsOptions
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.PairGenerator
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.ShardOptions
    com.google.cloud.genomics.dataflow.utils.com.google.cloud.genomics.dataflow.utils.TruncatedOutputStream
    com.google.cloud.genomics.dataflow.writers.bam
    com.google.cloud.genomics.dataflow.writers.bam.com.google.cloud.genomics.dataflow.writers.bam.CombineShardsFn
    com.google.cloud.genomics.dataflow.writers.bam.com.google.cloud.genomics.dataflow.writers.bam.WriteBAIFn
    com.google.cloud.genomics.dataflow.writers.bam.com.google.cloud.genomics.dataflow.writers.bam.WriteBAMFn
    com.google.cloud.genomics.dataflow.writers.bam.com.google.cloud.genomics.dataflow.writers.bam.WriteBAMTransform
    htsjdk.samtools
    htsjdk.samtools.htsjdk.samtools.BAMBlockWriter
    htsjdk.samtools.htsjdk.samtools.BAMFileIndexImpl
    htsjdk.samtools.htsjdk.samtools.BAMShardIndexer
    htsjdk.samtools.htsjdk.samtools.BinaryBAMShardIndexWriter
    htsjdk.samtools.htsjdk.samtools.SAMFileSpanImpl
    htsjdk.samtools.htsjdk.samtools.SeekingBAMFileReader




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