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AIMA-Java Core Algorithms from the book Artificial Intelligence a Modern Approach 3rd Ed.
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package aima.core.probability.bayes.approx;
import java.util.Map;
import aima.core.probability.CategoricalDistribution;
import aima.core.probability.RandomVariable;
import aima.core.probability.bayes.BayesianNetwork;
import aima.core.probability.proposition.AssignmentProposition;
import aima.core.probability.util.ProbUtil;
import aima.core.probability.util.ProbabilityTable;
/**
* Artificial Intelligence A Modern Approach (3rd Edition): page 533.
*
*
*
* function REJECTION-SAMPLING(X, e, bn, N) returns an estimate of P(X|e)
* inputs: X, the query variable
* e, observed values for variables E
* bn, a Bayesian network
* N, the total number of samples to be generated
* local variables: N, a vector of counts for each value of X, initially zero
*
* for j = 1 to N do
* x <- PRIOR-SAMPLE(bn)
* if x is consistent with e then
* N[x] <- N[x] + 1 where x is the value of X in x
* return NORMALIZE(N)
*
*
* Figure 14.14 The rejection-sampling algorithm for answering queries given
* evidence in a Bayesian Network.
*
* Note: The implementation has been extended to handle queries with
* multiple variables.
*
* @author Ciaran O'Reilly
* @author Ravi Mohan
*/
public class RejectionSampling implements BayesSampleInference {
private PriorSample ps = null;
public RejectionSampling() {
this(new PriorSample());
}
public RejectionSampling(PriorSample ps) {
this.ps = ps;
}
// function REJECTION-SAMPLING(X, e, bn, N) returns an estimate of
// P(X|e)
/**
* The REJECTION-SAMPLING algorithm in Figure 14.14. For answering queries
* given evidence in a Bayesian Network.
*
* @param X
* the query variables
* @param e
* observed values for variables E
* @param bn
* a Bayesian network
* @param Nsamples
* the total number of samples to be generated
* @return an estimate of P(X|e)
*/
public CategoricalDistribution rejectionSampling(RandomVariable[] X,
AssignmentProposition[] e, BayesianNetwork bn, int Nsamples) {
// local variables: N, a vector of counts for each value of X,
// initially zero
double[] N = new double[ProbUtil
.expectedSizeOfCategoricalDistribution(X)];
// for j = 1 to N do
for (int j = 0; j < Nsamples; j++) {
// x <- PRIOR-SAMPLE(bn)
Map x = ps.priorSample(bn);
// if x is consistent with e then
if (isConsistent(x, e)) {
// N[x] <- N[x] + 1
// where x is the value of X in x
N[ProbUtil.indexOf(X, x)] += 1.0;
}
}
// return NORMALIZE(N)
return new ProbabilityTable(N, X).normalize();
}
//
// START-BayesSampleInference
@Override
public CategoricalDistribution ask(final RandomVariable[] X,
final AssignmentProposition[] observedEvidence,
final BayesianNetwork bn, int N) {
return rejectionSampling(X, observedEvidence, bn, N);
}
// END-BayesSampleInference
//
//
// PRIVATE METHODS
//
private boolean isConsistent(Map x,
AssignmentProposition[] e) {
for (AssignmentProposition ap : e) {
if (!ap.getValue().equals(x.get(ap.getTermVariable()))) {
return false;
}
}
return true;
}
}