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com.hfg xml, html, svg, and bioinformatics utility library

There is a newer version: 20240423

package com.hfg.bio.seq;


//------------------------------------------------------------------------------
/**
 Factory for creating NucleicAcid sequence objects.
 
  @author J. Alex Taylor, hairyfatguy.com
 
 */
//------------------------------------------------------------------------------
// com.hfg Library
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
//
// J. Alex Taylor, President, Founder, CEO, COO, CFO, OOPS hairyfatguy.com
// [email protected]
//------------------------------------------------------------------------------

public class NucleicAcidFactory implements BioSequenceFactory
{
   private Integer mCompressionThreshold;

   //---------------------------------------------------------------------------
   public NucleicAcid createSeqObj()
   {
      NucleicAcid na = new NucleicAcid();
      if (mCompressionThreshold != null)
      {
         na.setCompressionThreshold(mCompressionThreshold);
      }

      return na;
   }


   //---------------------------------------------------------------------------
   public NucleicAcidFactory setCompressionThreshold(int inNumBytes)
   {
      mCompressionThreshold = inNumBytes;
      return this;
   }
}