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algorithms.eod_public.1.0.schemas.cns_other.json Maven / Gradle / Ivy
{
"id" : "cns_other",
"algorithm" : "eod_public",
"version" : "1.0",
"name" : "CNS Other",
"title" : "Other Parts of Central Nervous System",
"notes" : "C701 Spinal meninges\nC709 Meninges, NOS\nC720 Spinal cord\nC721 Cauda equina\nC722 Olfactory nerve \nC723 Optic nerve \nC724 Acoustic nerve \nC725 Cranial nerve, NOS\nC728 Overlapping lesion of brain and central nervous system\nC729 Nervous system, NOS\n\n**Note 1:** The following sources were used in the development of this schema\n* SEER Extent of Disease 1988: Codes and Coding Instructions (3rd Edition, 1998) (https://seer.cancer.gov/archive/manuals/EOD10Dig.3rd.pdf)\n* SEER Summary Staging Manual-2000: Codes and Coding Instructions (https://seer.cancer.gov/tools/ssm/)\n* Collaborative Stage Data Collection System, version 02.05: https://cancerstaging.org/cstage/Pages/default.aspx \n* Chapter 72 *Brain and Spinal Cord*, in the AJCC Cancer Staging Manual, Eighth Edition (2017) published by Springer International Publishing. Used with permission of the American College of Surgeons, Chicago, Illinois.\n\n**Note 2:** Summary Stage is the only applicable staging system for this site/histology/schema.",
"schema_selection_table" : "schema_selection_cns_other",
"inputs" : [ {
"key" : "year_dx",
"name" : "Year of Diagnosis",
"naaccr_item" : 390,
"table" : "year_dx_validation",
"used_for_staging" : false
}, {
"key" : "site",
"name" : "Primary Site",
"naaccr_item" : 400,
"table" : "primary_site",
"used_for_staging" : true
}, {
"key" : "hist",
"name" : "Histology",
"naaccr_item" : 522,
"table" : "histology",
"used_for_staging" : true
}, {
"key" : "behavior",
"name" : "Behavior",
"naaccr_item" : 523,
"table" : "behavior",
"used_for_staging" : true
}, {
"key" : "size_clin",
"name" : "Tumor Size Clinical",
"naaccr_item" : 752,
"table" : "tumor_size_clinical_60979",
"used_for_staging" : false
}, {
"key" : "size_path",
"name" : "Tumor Size Pathological",
"naaccr_item" : 754,
"table" : "tumor_size_pathological_25597",
"used_for_staging" : false
}, {
"key" : "size_summary",
"name" : "Tumor Size Summary",
"naaccr_item" : 756,
"default" : "999",
"table" : "tumor_size_summary_63115",
"used_for_staging" : false
}, {
"key" : "nodes_pos",
"name" : "Regional Nodes Positive",
"naaccr_item" : 820,
"default" : "99",
"table" : "nodes_pos_dna_91511",
"used_for_staging" : false
}, {
"key" : "nodes_exam",
"name" : "Regional Nodes Examined",
"naaccr_item" : 830,
"default" : "99",
"table" : "nodes_exam_dna_95635",
"used_for_staging" : false
}, {
"key" : "eod_primary_tumor",
"name" : "EOD Primary Tumor",
"naaccr_item" : 772,
"default" : "999",
"table" : "extension_bcd",
"used_for_staging" : true
}, {
"key" : "eod_regional_nodes",
"name" : "EOD Regional Nodes",
"naaccr_item" : 774,
"default" : "888",
"table" : "nodes_dna",
"used_for_staging" : true
}, {
"key" : "eod_mets",
"name" : "EOD Mets",
"naaccr_item" : 776,
"default" : "00",
"table" : "seer_mets_48348",
"used_for_staging" : true
}, {
"key" : "ss2018",
"name" : "SS2018",
"naaccr_item" : 764,
"table" : "ss2018_cns_other_67712",
"used_for_staging" : false
}, {
"key" : "grade_clin",
"name" : "Grade Clinical",
"naaccr_item" : 3843,
"default" : "9",
"table" : "grade_clinical_19997",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "grade_path",
"name" : "Grade Pathological",
"naaccr_item" : 3844,
"default" : "9",
"table" : "grade_pathological_11803",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "grade_post_therapy",
"name" : "Grade Post Therapy",
"naaccr_item" : 3845,
"table" : "grade_post_therapy_98283",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "brain_molecular_markers",
"name" : "Brain Molecular Markers",
"naaccr_item" : 3816,
"default" : "88",
"table" : "brain_molecular_markers_75370",
"used_for_staging" : false,
"metadata" : [ "NPCR_REQUIRED", "SSDI", "SEER_REQUIRED" ]
}, {
"key" : "chrom_1p_status",
"name" : "Chromosome 1p Status",
"naaccr_item" : 3801,
"default" : "8",
"table" : "chromosome_1p_status_40269",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "SSDI", "SEER_REQUIRED" ]
}, {
"key" : "chrom_19q_status",
"name" : "Chromosome 19q Status",
"naaccr_item" : 3802,
"default" : "8",
"table" : "chromosome_19q_status_72683",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "SSDI", "SEER_REQUIRED" ]
}, {
"key" : "mgmt",
"name" : "MGMT",
"naaccr_item" : 3889,
"default" : "8",
"table" : "mgmt_17454",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "SSDI", "SEER_REQUIRED" ]
} ],
"outputs" : [ {
"key" : "naaccr_schema_id",
"name" : "Schema ID",
"naaccr_item" : 3800,
"default" : "00722"
}, {
"key" : "ajcc_id",
"name" : "AJCC ID",
"naaccr_item" : 995,
"default" : "XX"
}, {
"key" : "derived_version",
"name" : "Derived Version",
"default" : "{{ctx_alg_version}}"
}, {
"key" : "eod_2018_t",
"name" : "Derived EOD 2018 T",
"naaccr_item" : 785,
"default" : "88"
}, {
"key" : "eod_2018_n",
"name" : "Derived EOD 2018 N",
"naaccr_item" : 815,
"default" : "88"
}, {
"key" : "eod_2018_m",
"name" : "Derived EOD 2018 M",
"naaccr_item" : 795,
"default" : "88"
}, {
"key" : "eod_2018_stage_group",
"name" : "Derived EOD 2018 Stage Group",
"naaccr_item" : 818,
"default" : "88"
}, {
"key" : "ss2018_derived",
"name" : "Derived Summary Stage 2018",
"naaccr_item" : 762,
"default" : "9"
} ],
"mappings" : [ {
"id" : "summary_stage_2018",
"name" : "Summary Stage 2018",
"initial_context" : [ {
"key" : "ss2018_derived",
"value" : "90"
} ],
"tables" : [ {
"id" : "extension_bcd",
"inputs" : [ "eod_primary_tumor" ],
"outputs" : [ "eod_2018_t", "ss2018_t" ]
}, {
"id" : "nodes_dna",
"inputs" : [ "eod_regional_nodes" ],
"outputs" : [ "eod_2018_n", "ss2018_n" ]
}, {
"id" : "seer_mets_48348",
"inputs" : [ "eod_mets" ],
"outputs" : [ "eod_2018_m", "ss2018_m" ]
}, {
"id" : "summary_stage_benign_3306",
"inputs" : [ "ss2018_m", "ss2018_n", "ss2018_t" ],
"outputs" : [ "ss2018_derived" ]
} ]
}, {
"id" : "ajcc_chapter_calculation",
"name" : "AJCC Chapter Calculation",
"tables" : [ {
"id" : "ajcc_chapter_calculation_81087",
"inputs" : [ "site", "hist", "behavior" ],
"outputs" : [ "ajcc_id" ]
} ]
} ],
"involved_tables" : [ "seer_mets_48348", "grade_post_therapy_98283", "mgmt_17454", "summary_stage_benign_3306", "tumor_size_pathological_25597", "chromosome_1p_status_40269", "tumor_size_clinical_60979", "nodes_exam_dna_95635", "grade_pathological_11803", "ajcc_chapter_calculation_81087", "extension_bcd", "ss2018_cns_other_67712", "primary_site", "schema_selection_cns_other", "histology", "chromosome_19q_status_72683", "year_dx_validation", "brain_molecular_markers_75370", "tumor_size_summary_63115", "behavior", "grade_clinical_19997", "nodes_dna", "nodes_pos_dna_91511" ],
"on_invalid_input" : "FAIL_WHEN_USED_FOR_STAGING",
"last_modified" : "2018-03-12T16:41:56.766Z"
}