All Downloads are FREE. Search and download functionalities are using the official Maven repository.

algorithms.cs.02.05.50.schemas.breast.json Maven / Gradle / Ivy

{
  "id" : "breast",
  "algorithm" : "cs",
  "version" : "02.05.50",
  "name" : "Breast",
  "title" : "Breast",
  "notes" : "DISCONTINUED SITE-SPECIFIC FACTORS:  SSF17, SSF18, SSF19, SSF20, SSF24\n\nC50.0 - Nipple\nC50.1 - Central portion of breast\nC50.2 - Upper-inner quadrant of breast\nC50.3 - Lower-inner quadrant of breast\nC50.4 - Upper-outer quadrant of breast\nC50.5 - Lower-outer quadrant of breast\nC50.6 - Axillary Tail of breast\nC50.8 - Overlapping lesion of breast\nC50.9 - Breast, NOS\n\n**Note**:  Laterality must be coded for this site.",
  "schema_num" : 106,
  "schema_selection_table" : "schema_selection_breast",
  "inputs" : [ {
    "key" : "site",
    "name" : "Primary Site",
    "description" : "Code for the primary site of the tumor being reported using either ICD-O-2 or ICD-O-3.",
    "naaccr_item" : 400,
    "table" : "primary_site",
    "used_for_staging" : true
  }, {
    "key" : "hist",
    "name" : "Histology",
    "description" : "Codes for the histologic type of the tumor being reported using ICD-O-3.",
    "naaccr_item" : 522,
    "table" : "histology",
    "used_for_staging" : true
  }, {
    "key" : "year_dx",
    "name" : "Year of Diagnosis",
    "description" : "Date of initial diagnosis by a recognized medical practitioner for the tumor being reported whether clinically or microscopically confirmed.",
    "naaccr_item" : 390,
    "table" : "cs_year_validation",
    "used_for_staging" : true
  }, {
    "key" : "cs_input_version_original",
    "name" : "CS Version Input Original",
    "description" : "Collaborative Staging (CS) version number initially used to code CS fields.",
    "naaccr_item" : 2935,
    "table" : "cs_input_version_original",
    "used_for_staging" : true
  }, {
    "key" : "behavior",
    "name" : "Behavior ICD-O-3",
    "description" : "Code for the behavior of the tumor being reported using ICD-O-3.",
    "naaccr_item" : 523,
    "table" : "behavior",
    "used_for_staging" : true
  }, {
    "key" : "grade",
    "name" : "Grade",
    "description" : "Code for the grade or degree of differentiation of the reportable tumor.",
    "naaccr_item" : 440,
    "table" : "grade",
    "used_for_staging" : false
  }, {
    "key" : "age_dx",
    "name" : "Age at Diagnosis",
    "description" : "Age of the patient at diagnosis in complete years.",
    "naaccr_item" : 230,
    "used_for_staging" : false
  }, {
    "key" : "lvi",
    "name" : "Lymph-vascular Invasion",
    "description" : "Indicates whether lymphatic duct or blood vessel (LVI) is identified in the pathology report.",
    "naaccr_item" : 1182,
    "default" : "8",
    "table" : "lvi",
    "used_for_staging" : false
  }, {
    "key" : "size",
    "name" : "CS Tumor Size",
    "description" : "Records the largest dimension or diameter of the primary tumor in millimeters.",
    "naaccr_item" : 2800,
    "default" : "999",
    "table" : "size_aab",
    "used_for_staging" : true
  }, {
    "key" : "extension",
    "name" : "CS Extension",
    "description" : "Identifies contiguous growth (extension) of the primary tumor within the organ of origin or its direct extension into neighboring organs. For certain sites such as ovary, discontinuous metastasis is coded in CS Extension.",
    "naaccr_item" : 2810,
    "default" : "999",
    "table" : "extension_bak",
    "used_for_staging" : true
  }, {
    "key" : "extension_eval",
    "name" : "CS Tumor Size/Ext Eval",
    "description" : "Records how the codes for the two items CS Tumor Size and CS Extension were determined, based on the diagnostic methods employed.",
    "naaccr_item" : 2820,
    "default" : "9",
    "table" : "extension_eval_cpa",
    "used_for_staging" : true
  }, {
    "key" : "nodes",
    "name" : "CS Lymph Nodes",
    "description" : "Identifies the regional lymph nodes involved with cancer at the time of diagnosis.",
    "naaccr_item" : 2830,
    "default" : "999",
    "table" : "nodes_daj",
    "used_for_staging" : true
  }, {
    "key" : "nodes_eval",
    "name" : "CS Lymph Nodes Eval",
    "description" : "Records how the code for CS Lymph Nodes was determined, based on the diagnosticmethods employed.",
    "naaccr_item" : 2840,
    "default" : "9",
    "table" : "nodes_eval_epa",
    "used_for_staging" : true
  }, {
    "key" : "nodes_pos",
    "name" : "Regional Nodes Positive",
    "description" : "Records the exact number of regional nodes examined by the pathologist and found to contain metastases. ",
    "naaccr_item" : 820,
    "default" : "99",
    "table" : "nodes_pos_fab",
    "used_for_staging" : false
  }, {
    "key" : "nodes_exam",
    "name" : "Regional Nodes Examined",
    "description" : "Records the total number of regional lymph nodes that were removed and examined by the pathologist. ",
    "naaccr_item" : 830,
    "default" : "99",
    "table" : "nodes_exam_gpa",
    "used_for_staging" : false
  }, {
    "key" : "mets",
    "name" : "CS Mets at DX",
    "description" : "Identifies the distant site(s) of metastatic involvement at time of diagnosis.",
    "naaccr_item" : 2850,
    "default" : "99",
    "table" : "mets_hau",
    "used_for_staging" : true
  }, {
    "key" : "mets_eval",
    "name" : "CS Mets Eval",
    "description" : "Records how the code for CS Mets at Dx was determined based on the diagnostic methods employed.",
    "naaccr_item" : 2860,
    "default" : "9",
    "table" : "mets_eval_ipa",
    "used_for_staging" : true
  }, {
    "key" : "ssf1",
    "name" : "Estrogen Receptor (ER) Assay",
    "naaccr_item" : 2880,
    "default" : "999",
    "table" : "ssf1_jag",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_III_COLLECTED_IN_CSV1", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "COC_ALREADY_COLLECTED", "SEER_ALREADY_COLLECTED" ]
  }, {
    "key" : "ssf2",
    "name" : "Progesterone Receptor (PR) Assay",
    "naaccr_item" : 2890,
    "default" : "999",
    "table" : "ssf2_kac",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_III_COLLECTED_IN_CSV1", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "COC_ALREADY_COLLECTED", "SEER_ALREADY_COLLECTED" ]
  }, {
    "key" : "ssf3",
    "name" : "Number of Positive Ipsilateral Level I-II Axillary Lymph Nodes",
    "naaccr_item" : 2900,
    "default" : "099",
    "table" : "ssf3_lac",
    "used_for_staging" : true,
    "metadata" : [ "NPCR_REQUIRED_WHEN_AVAILABLE_2011_FORWARD", "CCCR_ESSENTIAL_FOR_TNM_CLASSIFICATION" ]
  }, {
    "key" : "ssf4",
    "name" : "Immunohistochemistry (IHC) of Regional Lymph Nodes",
    "naaccr_item" : 2910,
    "default" : "987",
    "table" : "ssf4_mab",
    "used_for_staging" : true,
    "metadata" : [ "NPCR_REQUIRED_WHEN_AVAILABLE_2011_FORWARD", "CCCR_ESSENTIAL_FOR_TNM_CLASSIFICATION" ]
  }, {
    "key" : "ssf5",
    "name" : "Molecular (MOL) Studies of Regional Lymph Nodes",
    "naaccr_item" : 2920,
    "default" : "987",
    "table" : "ssf5_naa",
    "used_for_staging" : true,
    "metadata" : [ "NPCR_REQUIRED_WHEN_AVAILABLE_2011_FORWARD", "CCCR_ESSENTIAL_FOR_TNM_CLASSIFICATION" ]
  }, {
    "key" : "ssf6",
    "name" : "Size of Tumor-Invasive Component",
    "naaccr_item" : 2930,
    "default" : "987",
    "table" : "ssf6_oaa",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_III_COLLECTED_IN_CSV1", "COC_ALREADY_COLLECTED", "SEER_ALREADY_COLLECTED" ]
  }, {
    "key" : "ssf7",
    "name" : "Nottingham or Bloom-Richardson (BR) Score/Grade",
    "naaccr_item" : 2861,
    "default" : "999",
    "table" : "ssf7_saa",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf8",
    "name" : "HER2: Immunohistochemistry (IHC) Lab Value",
    "naaccr_item" : 2862,
    "default" : "999",
    "table" : "ssf8_sab",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf9",
    "name" : "HER2: Immunohistochemistry (IHC) Test Interpretation",
    "naaccr_item" : 2863,
    "default" : "999",
    "table" : "ssf9_sac",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf10",
    "name" : "HER2: Fluorescence In Situ Hybridization (FISH) Lab Value",
    "naaccr_item" : 2864,
    "default" : "988",
    "table" : "ssf10_sad",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION" ]
  }, {
    "key" : "ssf11",
    "name" : "HER2: Fluorescence In Situ Hybridization (FISH) Test Interpretation",
    "naaccr_item" : 2865,
    "default" : "999",
    "table" : "ssf11_sae",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf12",
    "name" : "HER2: Chromogenic In Situ Hybridization (CISH) Lab Value",
    "naaccr_item" : 2866,
    "default" : "988",
    "table" : "ssf12_saf",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION" ]
  }, {
    "key" : "ssf13",
    "name" : "HER2: Chromogenic In Situ Hybridization (CISH) Test Interpretation",
    "naaccr_item" : 2867,
    "default" : "999",
    "table" : "ssf13_sag",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf14",
    "name" : "HER2: Result of Other or Unknown Test",
    "naaccr_item" : 2868,
    "default" : "999",
    "table" : "ssf14_sbf",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2010_FORWARD", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf15",
    "name" : "HER2: Summary Result of Testing",
    "naaccr_item" : 2869,
    "default" : "999",
    "table" : "ssf15_sbg",
    "used_for_staging" : false,
    "metadata" : [ "COC_CLINICALLY_SIGNIFICANT", "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2011_FORWARD", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf16",
    "name" : "Combinations of ER, PR, and HER2 Results",
    "naaccr_item" : 2870,
    "default" : "988",
    "table" : "ssf16_sah",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_II_ESSENTIAL_FOR_CLINICAL_DECISION", "NPCR_REQUIRED_BY_NPCR_2011_FORWARD" ]
  }, {
    "key" : "ssf17",
    "name" : "Circulating Tumor Cells (CTC) and Method of Detection",
    "naaccr_item" : 2871,
    "default" : "988",
    "table" : "ssf17_sai",
    "used_for_staging" : false
  }, {
    "key" : "ssf18",
    "name" : "Disseminated Tumor Cells (DTC) and Method of Detection",
    "naaccr_item" : 2872,
    "default" : "988",
    "table" : "ssf18_saj",
    "used_for_staging" : false
  }, {
    "key" : "ssf19",
    "name" : "Assessment of Positive Ipsilateral Axillary Lymph Nodes",
    "naaccr_item" : 2873,
    "default" : "988",
    "table" : "ssf19_sak",
    "used_for_staging" : false
  }, {
    "key" : "ssf20",
    "name" : "Assessment of Positive Distant Metastases",
    "naaccr_item" : 2874,
    "default" : "988",
    "table" : "ssf20_sal",
    "used_for_staging" : false
  }, {
    "key" : "ssf21",
    "name" : "Response to Neoadjuvant Therapy",
    "naaccr_item" : 2875,
    "default" : "988",
    "table" : "ssf21_sam",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_IVA_COLLECT_IF_AVAILABLE_IN_PATH_REPORT", "COC_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf22",
    "name" : "Multigene Signature Method",
    "naaccr_item" : 2876,
    "default" : "999",
    "table" : "ssf22_san",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_IVA_COLLECT_IF_AVAILABLE_IN_PATH_REPORT", "COC_CLINICALLY_SIGNIFICANT", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf23",
    "name" : "Multigene Signature Results",
    "naaccr_item" : 2877,
    "default" : "999",
    "table" : "ssf23_sao",
    "used_for_staging" : false,
    "metadata" : [ "CCCR_IVA_COLLECT_IF_AVAILABLE_IN_PATH_REPORT", "COC_CLINICALLY_SIGNIFICANT", "SEER_CLINICALLY_SIGNIFICANT" ]
  }, {
    "key" : "ssf24",
    "name" : "Paget Disease",
    "naaccr_item" : 2878,
    "default" : "988",
    "table" : "ssf24_sap",
    "used_for_staging" : false
  }, {
    "key" : "ssf25",
    "name" : "CS Site-Specific Factor 25",
    "naaccr_item" : 2879,
    "default" : "988",
    "table" : "ssf25_snt",
    "used_for_staging" : false,
    "metadata" : [ "UNDEFINED_SSF" ]
  } ],
  "outputs" : [ {
    "key" : "schema_number",
    "name" : "Schema Number",
    "description" : "CS assigned schema number.",
    "default" : "106"
  }, {
    "key" : "csver_derived",
    "name" : "CS Version Derived",
    "description" : "Collaborative Staging (CS) version used to derive the CS output fields.",
    "naaccr_item" : 2936,
    "default" : "020550"
  }, {
    "key" : "ajcc6_t",
    "name" : "AJCC6 T"
  }, {
    "key" : "ajcc6_tdescriptor",
    "name" : "AJCC6 T Descriptor"
  }, {
    "key" : "ajcc6_n",
    "name" : "AJCC6 N"
  }, {
    "key" : "ajcc6_ndescriptor",
    "name" : "AJCC6 N Descriptor"
  }, {
    "key" : "ajcc6_m",
    "name" : "AJCC6 M"
  }, {
    "key" : "ajcc6_mdescriptor",
    "name" : "AJCC6 M Descriptor"
  }, {
    "key" : "ajcc6_stage",
    "name" : "AJCC6 Stage Group"
  }, {
    "key" : "ajcc7_t",
    "name" : "AJCC7 T"
  }, {
    "key" : "ajcc7_tdescriptor",
    "name" : "AJCC7 T Descriptor"
  }, {
    "key" : "ajcc7_n",
    "name" : "AJCC7 N"
  }, {
    "key" : "ajcc7_ndescriptor",
    "name" : "AJCC7 N Descriptor"
  }, {
    "key" : "ajcc7_m",
    "name" : "AJCC7 M"
  }, {
    "key" : "ajcc7_mdescriptor",
    "name" : "AJCC7 M Descriptor"
  }, {
    "key" : "ajcc7_stage",
    "name" : "AJCC7 Stage Group"
  }, {
    "key" : "t77",
    "name" : "Summary Stage T 1977"
  }, {
    "key" : "n77",
    "name" : "Summary Stage N 1977"
  }, {
    "key" : "m77",
    "name" : "Summary Stage M 1977"
  }, {
    "key" : "ss77",
    "name" : "Summary Stage Group 1977"
  }, {
    "key" : "t2000",
    "name" : "Summary Stage T 2000"
  }, {
    "key" : "n2000",
    "name" : "Summary Stage N 2000"
  }, {
    "key" : "m2000",
    "name" : "Summary Stage M 2000"
  }, {
    "key" : "ss2000",
    "name" : "Summary Stage Group 2000"
  }, {
    "key" : "stor_ajcc6_t",
    "name" : "AJCC6 T (Storage)",
    "naaccr_item" : 2940
  }, {
    "key" : "stor_ajcc6_tdescriptor",
    "name" : "AJCC6 T Descriptor (Storage)",
    "naaccr_item" : 2950
  }, {
    "key" : "stor_ajcc6_n",
    "name" : "AJCC6 N (Storage)",
    "naaccr_item" : 2960
  }, {
    "key" : "stor_ajcc6_ndescriptor",
    "name" : "AJCC6 N Descriptor (Storage)",
    "naaccr_item" : 2970
  }, {
    "key" : "stor_ajcc6_m",
    "name" : "AJCC6 M (Storage)",
    "naaccr_item" : 2980
  }, {
    "key" : "stor_ajcc6_mdescriptor",
    "name" : "AJCC6 M Descriptor (Storage)",
    "naaccr_item" : 2990
  }, {
    "key" : "stor_ajcc6_stage",
    "name" : "AJCC6 Stage Group (Storage)",
    "naaccr_item" : 3000
  }, {
    "key" : "stor_ajcc7_t",
    "name" : "AJCC7 T (Storage)",
    "naaccr_item" : 3400
  }, {
    "key" : "stor_ajcc7_tdescriptor",
    "name" : "AJCC7 T Descriptor (Storage)",
    "naaccr_item" : 3402
  }, {
    "key" : "stor_ajcc7_n",
    "name" : "AJCC7 N (Storage)",
    "naaccr_item" : 3410
  }, {
    "key" : "stor_ajcc7_ndescriptor",
    "name" : "AJCC7 N Descriptor (Storage)",
    "naaccr_item" : 3412
  }, {
    "key" : "stor_ajcc7_m",
    "name" : "AJCC7 M (Storage)",
    "naaccr_item" : 3420
  }, {
    "key" : "stor_ajcc7_mdescriptor",
    "name" : "AJCC7 M Descriptor (Storage)",
    "naaccr_item" : 3422
  }, {
    "key" : "stor_ajcc7_stage",
    "name" : "AJCC7 Stage Group (Storage)",
    "naaccr_item" : 3430
  }, {
    "key" : "stor_ss77",
    "name" : "Summary Stage Group 1977 (Storage)",
    "naaccr_item" : 3010
  }, {
    "key" : "stor_ss2000",
    "name" : "Summary Stage Group 2000 (Storage)",
    "naaccr_item" : 3020
  } ],
  "mappings" : [ {
    "id" : "mapping_t",
    "name" : "T",
    "initial_context" : [ {
      "key" : "stor_ajcc6_tdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_tdescriptor",
      "value" : ""
    }, {
      "key" : "ajcc6_tdescriptor",
      "value" : "ERROR"
    }, {
      "key" : "t2000",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_t",
      "value" : ""
    }, {
      "key" : "t77",
      "value" : ""
    }, {
      "key" : "ajcc7_tdescriptor",
      "value" : "ERROR"
    }, {
      "key" : "stor_ajcc6_t",
      "value" : ""
    }, {
      "key" : "ajcc6_t",
      "value" : ""
    }, {
      "key" : "ajcc7_t",
      "value" : ""
    } ],
    "tables" : [ {
      "id" : "extension_bak",
      "inputs" : [ "extension", "size", "behavior" ],
      "outputs" : [ "t77", "t2000", "ajcc7_t", "ajcc6_t" ]
    }, {
      "id" : "extension_eval_cpa",
      "output_mapping" : [ {
        "from" : "tdescriptor",
        "to" : "ajcc7_tdescriptor"
      } ],
      "inputs" : [ "extension_eval" ],
      "outputs" : [ "ajcc7_tdescriptor" ]
    }, {
      "id" : "ajcc_descriptor_codes",
      "input_mapping" : [ {
        "from" : "ajcc7_tdescriptor",
        "to" : "descriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_descriptor",
        "to" : "stor_ajcc7_tdescriptor"
      } ],
      "inputs" : [ "ajcc7_tdescriptor" ],
      "outputs" : [ "stor_ajcc7_tdescriptor" ]
    }, {
      "id" : "ajcc_tdescriptor_cleanup",
      "input_mapping" : [ {
        "from" : "ajcc7_t",
        "to" : "t"
      }, {
        "from" : "ajcc7_tdescriptor",
        "to" : "tdescriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_tdescriptor",
        "to" : "stor_ajcc7_tdescriptor"
      }, {
        "from" : "tdescriptor",
        "to" : "ajcc7_tdescriptor"
      } ],
      "inputs" : [ "ajcc7_tdescriptor", "ajcc7_t" ],
      "outputs" : [ "ajcc7_tdescriptor", "stor_ajcc7_tdescriptor" ]
    }, {
      "id" : "ajcc7_t_codes",
      "inputs" : [ "ajcc7_t" ],
      "outputs" : [ "stor_ajcc7_t" ]
    }, {
      "id" : "extension_eval_cpa",
      "output_mapping" : [ {
        "from" : "tdescriptor",
        "to" : "ajcc6_tdescriptor"
      } ],
      "inputs" : [ "extension_eval" ],
      "outputs" : [ "ajcc6_tdescriptor" ]
    }, {
      "id" : "ajcc_descriptor_codes",
      "input_mapping" : [ {
        "from" : "ajcc6_tdescriptor",
        "to" : "descriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_descriptor",
        "to" : "stor_ajcc6_tdescriptor"
      } ],
      "inputs" : [ "ajcc6_tdescriptor" ],
      "outputs" : [ "stor_ajcc6_tdescriptor" ]
    }, {
      "id" : "ajcc_tdescriptor_cleanup",
      "input_mapping" : [ {
        "from" : "ajcc6_t",
        "to" : "t"
      }, {
        "from" : "ajcc6_tdescriptor",
        "to" : "tdescriptor"
      } ],
      "output_mapping" : [ {
        "from" : "tdescriptor",
        "to" : "ajcc6_tdescriptor"
      }, {
        "from" : "stor_tdescriptor",
        "to" : "stor_ajcc6_tdescriptor"
      } ],
      "inputs" : [ "ajcc6_tdescriptor", "ajcc6_t" ],
      "outputs" : [ "ajcc6_tdescriptor", "stor_ajcc6_tdescriptor" ]
    }, {
      "id" : "ajcc6_t_codes",
      "inputs" : [ "ajcc6_t" ],
      "outputs" : [ "stor_ajcc6_t" ]
    } ]
  }, {
    "id" : "mapping_n",
    "name" : "N",
    "initial_context" : [ {
      "key" : "stor_ajcc6_n",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_ndescriptor",
      "value" : ""
    }, {
      "key" : "n77",
      "value" : ""
    }, {
      "key" : "ajcc6_n",
      "value" : ""
    }, {
      "key" : "ajcc7_n",
      "value" : ""
    }, {
      "key" : "n2000",
      "value" : ""
    }, {
      "key" : "ajcc6_ndescriptor",
      "value" : "ERROR"
    }, {
      "key" : "stor_ajcc7_n",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_ndescriptor",
      "value" : ""
    }, {
      "key" : "ajcc7_ndescriptor",
      "value" : "ERROR"
    } ],
    "tables" : [ {
      "id" : "nodes_daj",
      "inputs" : [ "nodes", "nodes_eval", "ssf4", "ssf5", "ssf3" ],
      "outputs" : [ "ajcc7_n", "ajcc6_n", "n2000", "n77" ]
    }, {
      "id" : "nodes_eval_epa",
      "output_mapping" : [ {
        "from" : "ndescriptor",
        "to" : "ajcc7_ndescriptor"
      } ],
      "inputs" : [ "nodes_eval" ],
      "outputs" : [ "ajcc7_ndescriptor" ]
    }, {
      "id" : "ajcc_descriptor_codes",
      "input_mapping" : [ {
        "from" : "ajcc7_ndescriptor",
        "to" : "descriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_descriptor",
        "to" : "stor_ajcc7_ndescriptor"
      } ],
      "inputs" : [ "ajcc7_ndescriptor" ],
      "outputs" : [ "stor_ajcc7_ndescriptor" ]
    }, {
      "id" : "ajcc_ndescriptor_cleanup",
      "input_mapping" : [ {
        "from" : "ajcc7_n",
        "to" : "n"
      }, {
        "from" : "ajcc7_ndescriptor",
        "to" : "ndescriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_ndescriptor",
        "to" : "stor_ajcc7_ndescriptor"
      }, {
        "from" : "ndescriptor",
        "to" : "ajcc7_ndescriptor"
      } ],
      "inputs" : [ "ajcc7_n", "ajcc7_ndescriptor" ],
      "outputs" : [ "ajcc7_ndescriptor", "stor_ajcc7_ndescriptor" ]
    }, {
      "id" : "ajcc7_n_codes",
      "inputs" : [ "ajcc7_n" ],
      "outputs" : [ "stor_ajcc7_n" ]
    }, {
      "id" : "nodes_eval_epa",
      "output_mapping" : [ {
        "from" : "ndescriptor",
        "to" : "ajcc6_ndescriptor"
      } ],
      "inputs" : [ "nodes_eval" ],
      "outputs" : [ "ajcc6_ndescriptor" ]
    }, {
      "id" : "ajcc_descriptor_codes",
      "input_mapping" : [ {
        "from" : "ajcc6_ndescriptor",
        "to" : "descriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_descriptor",
        "to" : "stor_ajcc6_ndescriptor"
      } ],
      "inputs" : [ "ajcc6_ndescriptor" ],
      "outputs" : [ "stor_ajcc6_ndescriptor" ]
    }, {
      "id" : "ajcc_ndescriptor_cleanup",
      "input_mapping" : [ {
        "from" : "ajcc6_n",
        "to" : "n"
      }, {
        "from" : "ajcc6_ndescriptor",
        "to" : "ndescriptor"
      } ],
      "output_mapping" : [ {
        "from" : "ndescriptor",
        "to" : "ajcc6_ndescriptor"
      }, {
        "from" : "stor_ndescriptor",
        "to" : "stor_ajcc6_ndescriptor"
      } ],
      "inputs" : [ "ajcc6_ndescriptor", "ajcc6_n" ],
      "outputs" : [ "ajcc6_ndescriptor", "stor_ajcc6_ndescriptor" ]
    }, {
      "id" : "ajcc6_n_codes",
      "inputs" : [ "ajcc6_n" ],
      "outputs" : [ "stor_ajcc6_n" ]
    } ]
  }, {
    "id" : "mapping_m",
    "name" : "M",
    "initial_context" : [ {
      "key" : "stor_ajcc6_m",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_m",
      "value" : ""
    }, {
      "key" : "m2000",
      "value" : ""
    }, {
      "key" : "ajcc6_m",
      "value" : ""
    }, {
      "key" : "ajcc7_m",
      "value" : ""
    }, {
      "key" : "m77",
      "value" : ""
    }, {
      "key" : "ajcc6_mdescriptor",
      "value" : "ERROR"
    }, {
      "key" : "stor_ajcc7_mdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_mdescriptor",
      "value" : ""
    }, {
      "key" : "ajcc7_mdescriptor",
      "value" : "ERROR"
    } ],
    "tables" : [ {
      "id" : "mets_hau",
      "inputs" : [ "mets" ],
      "outputs" : [ "ajcc7_m", "ajcc6_m", "m77", "m2000" ]
    }, {
      "id" : "mets_eval_ipa",
      "output_mapping" : [ {
        "from" : "mdescriptor",
        "to" : "ajcc7_mdescriptor"
      } ],
      "inputs" : [ "mets_eval" ],
      "outputs" : [ "ajcc7_mdescriptor" ]
    }, {
      "id" : "ajcc_descriptor_codes",
      "input_mapping" : [ {
        "from" : "ajcc7_mdescriptor",
        "to" : "descriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_descriptor",
        "to" : "stor_ajcc7_mdescriptor"
      } ],
      "inputs" : [ "ajcc7_mdescriptor" ],
      "outputs" : [ "stor_ajcc7_mdescriptor" ]
    }, {
      "id" : "ajcc_mdescriptor_cleanup",
      "input_mapping" : [ {
        "from" : "ajcc7_m",
        "to" : "m"
      }, {
        "from" : "ajcc7_mdescriptor",
        "to" : "mdescriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_mdescriptor",
        "to" : "stor_ajcc7_mdescriptor"
      }, {
        "from" : "mdescriptor",
        "to" : "ajcc7_mdescriptor"
      } ],
      "inputs" : [ "ajcc7_mdescriptor", "ajcc7_m" ],
      "outputs" : [ "ajcc7_mdescriptor", "stor_ajcc7_mdescriptor" ]
    }, {
      "id" : "ajcc7_m_codes",
      "inputs" : [ "ajcc7_m" ],
      "outputs" : [ "stor_ajcc7_m" ]
    }, {
      "id" : "mets_eval_ipa",
      "output_mapping" : [ {
        "from" : "mdescriptor",
        "to" : "ajcc6_mdescriptor"
      } ],
      "inputs" : [ "mets_eval" ],
      "outputs" : [ "ajcc6_mdescriptor" ]
    }, {
      "id" : "ajcc_descriptor_codes",
      "input_mapping" : [ {
        "from" : "ajcc6_mdescriptor",
        "to" : "descriptor"
      } ],
      "output_mapping" : [ {
        "from" : "stor_descriptor",
        "to" : "stor_ajcc6_mdescriptor"
      } ],
      "inputs" : [ "ajcc6_mdescriptor" ],
      "outputs" : [ "stor_ajcc6_mdescriptor" ]
    }, {
      "id" : "ajcc_mdescriptor_cleanup",
      "input_mapping" : [ {
        "from" : "ajcc6_m",
        "to" : "m"
      }, {
        "from" : "ajcc6_mdescriptor",
        "to" : "mdescriptor"
      } ],
      "output_mapping" : [ {
        "from" : "mdescriptor",
        "to" : "ajcc6_mdescriptor"
      }, {
        "from" : "stor_mdescriptor",
        "to" : "stor_ajcc6_mdescriptor"
      } ],
      "inputs" : [ "ajcc6_m", "ajcc6_mdescriptor" ],
      "outputs" : [ "stor_ajcc6_mdescriptor", "ajcc6_mdescriptor" ]
    }, {
      "id" : "ajcc6_m_codes",
      "inputs" : [ "ajcc6_m" ],
      "outputs" : [ "stor_ajcc6_m" ]
    } ]
  }, {
    "id" : "mapping_ajcc7",
    "name" : "AJCC 7",
    "inclusion_tables" : [ {
      "id" : "ajcc7_inclusions_tpg",
      "inputs" : [ "hist" ]
    } ],
    "initial_context" : [ {
      "key" : "stor_ajcc7_stage",
      "value" : ""
    }, {
      "key" : "ajcc7_stage",
      "value" : ""
    } ],
    "tables" : [ {
      "id" : "ajcc7_stage_uac",
      "input_mapping" : [ {
        "from" : "ajcc7_t",
        "to" : "t"
      }, {
        "from" : "ajcc7_n",
        "to" : "n"
      }, {
        "from" : "ajcc7_m",
        "to" : "m"
      } ],
      "output_mapping" : [ {
        "from" : "stage",
        "to" : "ajcc7_stage"
      } ],
      "inputs" : [ "ajcc7_n", "ajcc7_m", "ajcc7_t" ],
      "outputs" : [ "ajcc7_stage" ]
    }, {
      "id" : "ajcc7_stage_codes",
      "inputs" : [ "ajcc7_stage" ],
      "outputs" : [ "stor_ajcc7_stage" ]
    } ]
  }, {
    "id" : "mapping_ajcc7_excluded",
    "name" : "AJCC 7 Excluded",
    "exclusion_tables" : [ {
      "id" : "ajcc7_inclusions_tpg",
      "inputs" : [ "hist" ]
    } ],
    "initial_context" : [ {
      "key" : "stor_ajcc7_tdescriptor",
      "value" : "N"
    }, {
      "key" : "stor_ajcc7_mdescriptor",
      "value" : "N"
    }, {
      "key" : "ajcc7_mdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_stage",
      "value" : "888"
    }, {
      "key" : "stor_ajcc7_ndescriptor",
      "value" : "N"
    }, {
      "key" : "ajcc7_t",
      "value" : "NA"
    }, {
      "key" : "stor_ajcc7_t",
      "value" : "888"
    }, {
      "key" : "ajcc7_n",
      "value" : "NA"
    }, {
      "key" : "stor_ajcc7_n",
      "value" : "888"
    }, {
      "key" : "ajcc7_tdescriptor",
      "value" : ""
    }, {
      "key" : "ajcc7_ndescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_m",
      "value" : "888"
    }, {
      "key" : "ajcc7_stage",
      "value" : "NA"
    }, {
      "key" : "ajcc7_m",
      "value" : "NA"
    } ]
  }, {
    "id" : "mapping_ajcc6",
    "name" : "AJCC 6",
    "exclusion_tables" : [ {
      "id" : "ajcc6_exclusions_pan",
      "inputs" : [ "hist" ]
    } ],
    "initial_context" : [ {
      "key" : "ajcc6_stage",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_stage",
      "value" : ""
    } ],
    "tables" : [ {
      "id" : "ajcc6_stage_qad",
      "input_mapping" : [ {
        "from" : "ajcc6_t",
        "to" : "t"
      }, {
        "from" : "ajcc6_n",
        "to" : "n"
      }, {
        "from" : "ajcc6_m",
        "to" : "m"
      } ],
      "output_mapping" : [ {
        "from" : "stage",
        "to" : "ajcc6_stage"
      } ],
      "inputs" : [ "ajcc6_n", "ajcc6_m", "ajcc6_t" ],
      "outputs" : [ "ajcc6_stage" ]
    }, {
      "id" : "ajcc6_stage_codes",
      "inputs" : [ "ajcc6_stage" ],
      "outputs" : [ "stor_ajcc6_stage" ]
    } ]
  }, {
    "id" : "mapping_ajcc6_included",
    "name" : "AJCC 6 Included",
    "inclusion_tables" : [ {
      "id" : "ajcc6_exclusions_pan",
      "inputs" : [ "hist" ]
    } ],
    "initial_context" : [ {
      "key" : "stor_ajcc6_m",
      "value" : "88"
    }, {
      "key" : "stor_ajcc6_n",
      "value" : "88"
    }, {
      "key" : "stor_ajcc6_tdescriptor",
      "value" : "N"
    }, {
      "key" : "ajcc6_ndescriptor",
      "value" : ""
    }, {
      "key" : "ajcc6_tdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_ndescriptor",
      "value" : "N"
    }, {
      "key" : "ajcc6_t",
      "value" : "NA"
    }, {
      "key" : "ajcc6_stage",
      "value" : "NA"
    }, {
      "key" : "ajcc6_mdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_stage",
      "value" : "88"
    }, {
      "key" : "ajcc6_m",
      "value" : "NA"
    }, {
      "key" : "stor_ajcc6_t",
      "value" : "88"
    }, {
      "key" : "ajcc6_n",
      "value" : "NA"
    }, {
      "key" : "stor_ajcc6_mdescriptor",
      "value" : "N"
    } ]
  }, {
    "id" : "mapping_summary_stage",
    "name" : "Summary Stage",
    "tables" : [ {
      "id" : "summary_stage_rpa",
      "input_mapping" : [ {
        "from" : "n77",
        "to" : "n"
      }, {
        "from" : "m77",
        "to" : "m"
      }, {
        "from" : "t77",
        "to" : "t"
      } ],
      "output_mapping" : [ {
        "from" : "stage",
        "to" : "ss77"
      } ],
      "inputs" : [ "t77", "m77", "n77" ],
      "outputs" : [ "ss77" ]
    }, {
      "id" : "ss_codes",
      "input_mapping" : [ {
        "from" : "ss77",
        "to" : "ss"
      } ],
      "output_mapping" : [ {
        "from" : "stor_ss",
        "to" : "stor_ss77"
      } ],
      "inputs" : [ "ss77" ],
      "outputs" : [ "stor_ss77" ]
    }, {
      "id" : "summary_stage_rpa",
      "input_mapping" : [ {
        "from" : "m2000",
        "to" : "m"
      }, {
        "from" : "t2000",
        "to" : "t"
      }, {
        "from" : "n2000",
        "to" : "n"
      } ],
      "output_mapping" : [ {
        "from" : "stage",
        "to" : "ss2000"
      } ],
      "inputs" : [ "t2000", "n2000", "m2000" ],
      "outputs" : [ "ss2000" ]
    }, {
      "id" : "ss_codes",
      "input_mapping" : [ {
        "from" : "ss2000",
        "to" : "ss"
      } ],
      "output_mapping" : [ {
        "from" : "stor_ss",
        "to" : "stor_ss2000"
      } ],
      "inputs" : [ "ss2000" ],
      "outputs" : [ "stor_ss2000" ]
    } ]
  }, {
    "id" : "mapping_ajcc7_invalid_year",
    "name" : "Validate AJCC7 Year",
    "exclusion_tables" : [ {
      "id" : "ajcc7_year_validation",
      "inputs" : [ "year_dx", "cs_input_version_original" ]
    } ],
    "initial_context" : [ {
      "key" : "stor_ajcc7_m",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_stage",
      "value" : ""
    }, {
      "key" : "ajcc7_m",
      "value" : ""
    }, {
      "key" : "ajcc7_n",
      "value" : ""
    }, {
      "key" : "ajcc7_mdescriptor",
      "value" : ""
    }, {
      "key" : "ajcc7_stage",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_mdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_tdescriptor",
      "value" : ""
    }, {
      "key" : "ajcc7_tdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_t",
      "value" : ""
    }, {
      "key" : "ajcc7_ndescriptor",
      "value" : ""
    }, {
      "key" : "ajcc7_t",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_n",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_ndescriptor",
      "value" : ""
    } ]
  }, {
    "id" : "mapping_ajcc6_invalid_year",
    "name" : "Validate AJCC6 Year",
    "exclusion_tables" : [ {
      "id" : "ajcc6_year_validation",
      "inputs" : [ "year_dx", "cs_input_version_original" ]
    } ],
    "initial_context" : [ {
      "key" : "stor_ajcc6_m",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_ndescriptor",
      "value" : ""
    }, {
      "key" : "n77",
      "value" : ""
    }, {
      "key" : "stor_ajcc7_stage",
      "value" : ""
    }, {
      "key" : "ajcc6_m",
      "value" : ""
    }, {
      "key" : "t2000",
      "value" : ""
    }, {
      "key" : "ss77",
      "value" : ""
    }, {
      "key" : "stor_ss77",
      "value" : ""
    }, {
      "key" : "ajcc6_tdescriptor",
      "value" : ""
    }, {
      "key" : "t77",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_stage",
      "value" : ""
    }, {
      "key" : "n2000",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_t",
      "value" : ""
    }, {
      "key" : "ajcc6_t",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_n",
      "value" : ""
    }, {
      "key" : "m2000",
      "value" : ""
    }, {
      "key" : "ss2000",
      "value" : ""
    }, {
      "key" : "ajcc6_ndescriptor",
      "value" : ""
    }, {
      "key" : "ajcc6_n",
      "value" : ""
    }, {
      "key" : "m77",
      "value" : ""
    }, {
      "key" : "ajcc6_stage",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_mdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ajcc6_tdescriptor",
      "value" : ""
    }, {
      "key" : "ajcc6_mdescriptor",
      "value" : ""
    }, {
      "key" : "stor_ss2000",
      "value" : ""
    } ]
  } ],
  "involved_tables" : [ "lymph_nodes_clinical_evaluation_xcx", "size_aab", "ssf22_san", "ssf23_sao", "ssf5_naa", "ssf25_snt", "extension_behavior_xci", "schema_selection_breast", "lymph_nodes_positive_axillary_node_xcy", "ajcc7_t_codes", "extension_size_xar", "determine_correct_table_for_ajcc6_n_ns9", "histology", "ssf24_sap", "cs_input_version_original", "ajcc7_stage_uac", "nodes_pos_fab", "lvi", "ssf3_lac", "ajcc_tdescriptor_cleanup", "ssf11_sae", "ssf16_sah", "ssf14_sbf", "ssf20_sal", "ajcc7_year_validation", "nodes_daj", "ajcc_descriptor_codes", "ajcc7_inclusions_tpg", "ssf10_sad", "ssf15_sbg", "ajcc6_stage_qad", "ssf21_sam", "grade", "summary_stage_rpa", "ssf17_sai", "ajcc7_m_codes", "ssf1_jag", "ajcc_ndescriptor_cleanup", "extension_bak", "ssf19_sak", "ssf6_oaa", "ajcc6_t_codes", "ssf18_saj", "ajcc_mdescriptor_cleanup", "ajcc6_exclusions_pan", "ss_codes", "ssf7_saa", "nodes_exam_gpa", "ssf4_mab", "ajcc6_n_codes", "behavior", "mets_hau", "mets_eval_ipa", "ssf8_sab", "extension_eval_cpa", "ajcc7_n_codes", "ajcc6_stage_codes", "ssf12_saf", "ajcc7_stage_codes", "ihcmol_xcc", "primary_site", "ajcc6_year_validation", "ssf2_kac", "lymph_nodes_pathologic_evaluation_xcw", "ajcc6_m_codes", "nodes_eval_epa", "cs_year_validation", "ssf9_sac", "ssf13_sag" ],
  "last_modified" : "2016-01-28T18:55:45.436Z"
}




© 2015 - 2024 Weber Informatics LLC | Privacy Policy