algorithms.eod_public.1.1.schemas.ill_defined_other.json Maven / Gradle / Ivy
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A cancer staging client library
{
"id" : "ill_defined_other",
"algorithm" : "eod_public",
"version" : "1.1",
"name" : "Ill-Defined Other",
"title" : "Other and Ill-Defined Sites, Unknown Primary Site",
"notes" : "C420-C424, C761-C765, C767-C768, C770-C775, C778-C779: 8000-8700, 8720-8790, 9700-9701 \n\nC809: 8000-8040, 8042-8180, 8191-8246, 8248-8700, 8720-8790, 9700-9701 \n\nC760 and Schema Discriminator 1: Occult Head and Neck Lymph Nodes: 0, 1 (8000-8700, 8720-8790, 9700-9701)\n\nC760-C765, C767-C768, C809\nC42 and C77, Other than Hematopoietic neoplasms (9590-9992)\n\nC420 Blood\nC421 Bone marrow\nC422 Spleen\nC423 Reticuloendothelial system, NOS\nC424 Hematopoietic system, NOS\n\n**Other and ill-defined sites of**\nC760 Head, face or neck, NOS\nC761 Thorax, NOS\nC762 Abdomen, NOS\nC763 Pelvis, NOS\nC764 Upper limb, NOS\nC765 Lower limb, NOS\nC767 Other ill-defined sites\nC768 Overlapping lesion of ill-defined sites\n\n**Lymph nodes of**\nC770 Lymph nodes of head, face and neck\nC771 Lymph nodes of intrathoracic\nC772 Lymph nodes of intra-abdominal\nC773 Lymph nodes of axilla or arm\nC774 Lymph nodes of inguinal region or leg\nC775 Lymph nodes of pelvis\nC778 Lymph nodes of multiple regions\nC779 Lymph nodes, NOS\nC809 Unknown primary site\n\n**Note 1:** The following sources were used in the development of this schema\n* SEER Extent of Disease 1988: Codes and Coding Instructions (3rd Edition, 1998) (https://seer.cancer.gov/archive/manuals/EOD10Dig.3rd.pdf)\n* SEER Summary Staging Manual-2000: Codes and Coding Instructions (https://seer.cancer.gov/tools/ssm/)\n* Collaborative Stage Data Collection System, version 02.05: https://cancerstaging.org/cstage/Pages/default.aspx \n\n**Note 2:** *Schema Discriminator 1: Occult Head and Neck Lymph Nodes* is used to discriminate between Cervical Lymph Nodes and Unknown Primary Tumor of the Head and Neck, Ill-Defined Other and Soft Tissue Other when primary site is C760.\n\n**Note 3:** See the following schemas for the listed histologies \n* C760 (8000-8700, 8720-8790, 8941, 9700-9701: Schema Discriminator 1 Occult Head and Neck Lymph Nodes: 2, 3, 4, 5): *Cervical Lymph Nodes and Unknown Primary Tumors of the Head and Neck*\n* C760 (8941: Schema Discriminator 1 Occult Head and Neck Lymph Nodes: 0,1): *Soft Tissue Other*\n* C809 (8041, 8190, 8247): *Merkel Cell Skin*\n* 8710-8714, 8800-8934, 8940-9137, 9141-9582: *Soft Tissue Other*\n* 8935-8936: *GIST*\n* 9140: *Kaposi Sarcoma*\n\n**Note 4:** Summary Stage is the only applicable staging system for this site/histology/schema.",
"schema_selection_table" : "schema_selection_ill_defined_other",
"schema_discriminators" : [ "discriminator_1" ],
"inputs" : [ {
"key" : "year_dx",
"name" : "Year of Diagnosis",
"naaccr_item" : 390,
"table" : "year_dx_validation",
"used_for_staging" : false
}, {
"key" : "site",
"name" : "Primary Site",
"naaccr_item" : 400,
"table" : "primary_site",
"used_for_staging" : true
}, {
"key" : "hist",
"name" : "Histology",
"naaccr_item" : 522,
"table" : "histology",
"used_for_staging" : true
}, {
"key" : "discriminator_1",
"name" : "Schema Discriminator 1",
"naaccr_item" : 3926,
"table" : "occult_head_and_neck_lymph_nodes_10277",
"used_for_staging" : true,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "size_clin",
"name" : "Tumor Size Clinical",
"naaccr_item" : 752,
"table" : "tumor_size_clinical_60979",
"used_for_staging" : false
}, {
"key" : "size_path",
"name" : "Tumor Size Pathological",
"naaccr_item" : 754,
"table" : "tumor_size_pathological_25597",
"used_for_staging" : false
}, {
"key" : "size_summary",
"name" : "Tumor Size Summary",
"naaccr_item" : 756,
"default" : "999",
"table" : "tumor_size_summary_63115",
"used_for_staging" : false
}, {
"key" : "nodes_pos",
"name" : "Regional Nodes Positive",
"naaccr_item" : 820,
"default" : "99",
"table" : "nodes_pos_dna_91511",
"used_for_staging" : false
}, {
"key" : "nodes_exam",
"name" : "Regional Nodes Examined",
"naaccr_item" : 830,
"default" : "99",
"table" : "nodes_exam_dna_95635",
"used_for_staging" : false
}, {
"key" : "eod_primary_tumor",
"name" : "EOD Primary Tumor",
"naaccr_item" : 772,
"default" : "888",
"table" : "extension_bna",
"used_for_staging" : true
}, {
"key" : "eod_regional_nodes",
"name" : "EOD Regional Nodes",
"naaccr_item" : 774,
"default" : "888",
"table" : "nodes_dna",
"used_for_staging" : true
}, {
"key" : "eod_mets",
"name" : "EOD Mets",
"naaccr_item" : 776,
"default" : "88",
"table" : "mets_hna",
"used_for_staging" : true
}, {
"key" : "ss2018",
"name" : "SS2018",
"naaccr_item" : 764,
"default" : "9",
"table" : "ss2018_ill_defined_18664",
"used_for_staging" : false
}, {
"key" : "grade_clin",
"name" : "Grade Clinical",
"naaccr_item" : 3843,
"default" : "9",
"table" : "grade_clinical_standard_non_ajcc_32473",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "grade_path",
"name" : "Grade Pathological",
"naaccr_item" : 3844,
"default" : "9",
"table" : "grade_pathological_standard_non_ajcc_5627",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "grade_post_therapy",
"name" : "Grade Post Therapy",
"naaccr_item" : 3845,
"table" : "grade_post_therapy_standard_non_ajcc_43091",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "SSDI", "CCCR_REQUIRED", "SEER_REQUIRED" ]
} ],
"outputs" : [ {
"key" : "naaccr_schema_id",
"name" : "Schema ID",
"naaccr_item" : 3800,
"default" : "99999"
}, {
"key" : "ajcc_id",
"name" : "AJCC ID",
"naaccr_item" : 995,
"default" : "XX"
}, {
"key" : "derived_version",
"name" : "Derived Version",
"default" : "{{ctx_alg_version}}"
}, {
"key" : "eod_2018_t",
"name" : "Derived EOD 2018 T",
"naaccr_item" : 785,
"default" : "88"
}, {
"key" : "eod_2018_n",
"name" : "Derived EOD 2018 N",
"naaccr_item" : 815,
"default" : "88"
}, {
"key" : "eod_2018_m",
"name" : "Derived EOD 2018 M",
"naaccr_item" : 795,
"default" : "88"
}, {
"key" : "eod_2018_stage_group",
"name" : "Derived EOD 2018 Stage Group",
"naaccr_item" : 818,
"default" : "88"
}, {
"key" : "ss2018_derived",
"name" : "Derived Summary Stage 2018",
"naaccr_item" : 762,
"default" : "9"
} ],
"mappings" : [ {
"id" : "summary_stage_2018",
"name" : "Summary Stage 2018",
"tables" : [ {
"id" : "extension_bna",
"inputs" : [ "eod_primary_tumor" ],
"outputs" : [ "eod_2018_t", "ss2018_t" ]
}, {
"id" : "nodes_dna",
"inputs" : [ "eod_regional_nodes" ],
"outputs" : [ "eod_2018_n", "ss2018_n" ]
}, {
"id" : "mets_hna",
"inputs" : [ "eod_mets" ],
"outputs" : [ "eod_2018_m", "ss2018_m" ]
}, {
"id" : "summary_stage_lymphoma_25139",
"inputs" : [ "ss2018_m", "ss2018_n", "ss2018_t" ],
"outputs" : [ "ss2018_derived" ]
} ]
} ],
"involved_tables" : [ "grade_clinical_standard_non_ajcc_32473", "occult_head_and_neck_lymph_nodes_10277", "extension_bna", "grade_pathological_standard_non_ajcc_5627", "tumor_size_pathological_25597", "summary_stage_lymphoma_25139", "tumor_size_clinical_60979", "nodes_exam_dna_95635", "primary_site", "schema_selection_ill_defined_other", "histology", "grade_post_therapy_standard_non_ajcc_43091", "year_dx_validation", "mets_hna", "tumor_size_summary_63115", "nodes_dna", "ss2018_ill_defined_18664", "nodes_pos_dna_91511" ],
"on_invalid_input" : "CONTINUE",
"last_modified" : "2018-04-19T21:52:48.007Z"
}