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algorithms.tnm.1.7.schemas.brain.json Maven / Gradle / Ivy
{
"id" : "brain",
"algorithm" : "tnm",
"version" : "1.7",
"name" : "Brain",
"title" : "Brain and Cerebral Meninges",
"notes" : "C700 Cerebral meninges\nC710 Cerebrum\nC711 Frontal lobe\nC712 Temporal lobe\nC713 Parietal lobe\nC714 Occipital lobe\nC715 Ventricle, NOS\nC716 Cerebellum, NOS\nC717 Brain stem\nC718 Overlapping lesion of brain\nC719 Brain, NOS\n\n**Note 1:** TNM opted not to recommend a TNM scheme in 7th edition.\n\n**Note 2:** TNM is not defined for this schema. If directly assigning Summary Stage 2000 (SS2000), use the *Brain and Cerebral Meninges* chapter on page 272 of the [SS2000 on-line manual](http://seer.cancer.gov/tools/ssm/SSSM2000-122012.pdf#page=272).",
"schema_selection_table" : "schema_selection_brain",
"inputs" : [ {
"key" : "year_dx",
"name" : "Year of Diagnosis",
"naaccr_item" : 390,
"table" : "year_dx_validation",
"used_for_staging" : false
}, {
"key" : "site",
"name" : "Primary Site",
"naaccr_item" : 400,
"table" : "primary_site",
"used_for_staging" : true
}, {
"key" : "hist",
"name" : "Histology",
"naaccr_item" : 522,
"table" : "histology",
"used_for_staging" : true
}, {
"key" : "ssf1",
"name" : "World Health Organization (WHO) Grade Classification",
"naaccr_item" : 2880,
"default" : "999",
"table" : "ssf1_jpo",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "NPCR_REQUIRED", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "ssf2",
"name" : "Ki-67/MIB-1 Labeling Index (LI): Brain",
"naaccr_item" : 2890,
"default" : "988",
"table" : "ssf2_kpl",
"used_for_staging" : false
}, {
"key" : "ssf3",
"name" : "Functional Neurologic Status - Karnofsky Performance Scale (KPS)",
"naaccr_item" : 2900,
"default" : "988",
"table" : "ssf3_lpm",
"used_for_staging" : false
}, {
"key" : "ssf4",
"name" : "Methylation of O6-Methylguanine-Methyltransferase (MGMT)",
"naaccr_item" : 2910,
"default" : "988",
"table" : "ssf4_mpn",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "CCCR_REQUIRED" ]
}, {
"key" : "ssf5",
"name" : "Chromosome 1p: Loss of Heterozygosity (LOH)",
"naaccr_item" : 2920,
"default" : "988",
"table" : "ssf5_nph",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "CCCR_REQUIRED" ]
}, {
"key" : "ssf6",
"name" : "Chromosome 19q: Loss of Heterozygosity (LOH)",
"naaccr_item" : 2930,
"default" : "988",
"table" : "ssf6_opf",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "CCCR_REQUIRED" ]
}, {
"key" : "ssf7",
"name" : "Surgical Resection",
"naaccr_item" : 2861,
"default" : "988",
"table" : "ssf7_sqk",
"used_for_staging" : false
}, {
"key" : "ssf8",
"name" : "Unifocal vs Multifocal Tumor",
"naaccr_item" : 2862,
"default" : "988",
"table" : "ssf8_sql",
"used_for_staging" : false
} ],
"outputs" : [ {
"key" : "derived_version",
"name" : "Derived Version",
"default" : "{{ctx_alg_version}}"
}, {
"key" : "clin_stage_group",
"name" : "Derived SEER Clin Stage Group",
"naaccr_item" : 3610,
"default" : "88"
}, {
"key" : "path_stage_group",
"name" : "Derived SEER Path Stage Group",
"naaccr_item" : 3605,
"default" : "88"
}, {
"key" : "combined_stage_group",
"name" : "Derived SEER Combined Stage Group",
"naaccr_item" : 3614,
"default" : "88"
}, {
"key" : "combined_t",
"name" : "Derived SEER Combined T",
"naaccr_item" : 3616,
"default" : "88"
}, {
"key" : "combined_n",
"name" : "Derived SEER Combined N",
"naaccr_item" : 3618,
"default" : "88"
}, {
"key" : "combined_m",
"name" : "Derived SEER Combined M",
"naaccr_item" : 3620,
"default" : "88"
}, {
"key" : "source_t",
"name" : "Derived SEER Combined T Source",
"naaccr_item" : 3622
}, {
"key" : "source_n",
"name" : "Derived SEER Combined N Source",
"naaccr_item" : 3624
}, {
"key" : "source_m",
"name" : "Derived SEER Combined M Source",
"naaccr_item" : 3626
} ],
"involved_tables" : [ "primary_site", "ssf6_opf", "ssf4_mpn", "histology", "ssf1_jpo", "ssf8_sql", "year_dx_validation", "ssf7_sqk", "ssf3_lpm", "ssf2_kpl", "schema_selection_brain", "ssf5_nph" ],
"on_invalid_input" : "FAIL_WHEN_USED_FOR_STAGING",
"last_modified" : "2018-04-11T19:53:09.028Z"
}