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algorithms.tnm.1.7.schemas.lymphoma.json Maven / Gradle / Ivy
{
"id" : "lymphoma",
"algorithm" : "tnm",
"version" : "1.7",
"name" : "Lymphoma",
"title" : "Hodgkin and Non-Hodgkin Lymphomas of All Sites (excluding Mycosis Fungoides and Sezary Disease)",
"notes" : "M-9590, 9591, 9596, 9597, 9650-9653, 9655, 9659, 9663, 9671, 9673, 9678-9680, 9687-9691, 9695, 9698-9699, 9702, 9705, 9708-9709, 9712, 9714, 9716-9719, 9724-9726, 9727, 9735, 9737-9738 (EXCEPT C441, C690, C695-C696)\n\nM-9811-9818,9823,9827,9837 (EXCEPT C421, C441, C690, C695-C696)\n\n**Note 1:** This schema is based on the UICC chapters *Hodgkin & Non-Hodgkin Lymphomas,* pages 304-310.\n\n**Note 2:** In addition to directly assigning Clinical and Pathologic Stage Group, Summary Stage 2000 (SS2000) must be captured. If directly assigning SS2000, use the *Hodgkin & Non-Hodgkin Lymphoma of All Sites* chapter on page 284 of the [SS2000 on-line manual](http://seer.cancer.gov/tools/ssm/SSSM2000-122012.pdf#page=284).",
"schema_selection_table" : "schema_selection_lymphoma",
"inputs" : [ {
"key" : "year_dx",
"name" : "Year of Diagnosis",
"naaccr_item" : 390,
"table" : "year_dx_validation",
"used_for_staging" : false
}, {
"key" : "site",
"name" : "Primary Site",
"naaccr_item" : 400,
"table" : "primary_site",
"used_for_staging" : true
}, {
"key" : "hist",
"name" : "Histology",
"naaccr_item" : 522,
"table" : "histology",
"used_for_staging" : true
}, {
"key" : "ssf1",
"name" : "Associated with HIV/AIDS",
"naaccr_item" : 2880,
"default" : "999",
"table" : "ssf1_jpj",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "CCCR_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "ssf2",
"name" : "Systemic Symptoms at Diagnosis",
"naaccr_item" : 2890,
"default" : "999",
"table" : "ssf2_kpg",
"used_for_staging" : true,
"metadata" : [ "SEER_REQUIRED" ]
}, {
"key" : "ssf3",
"name" : "International Prognostic Index (IPI)",
"naaccr_item" : 2900,
"default" : "988",
"table" : "ssf3_lph",
"used_for_staging" : false,
"metadata" : [ "COC_REQUIRED", "CCCR_REQUIRED" ]
}, {
"key" : "ssf4",
"name" : "Follicular Lymphoma Prognostic Index (FLIPI)",
"naaccr_item" : 2910,
"default" : "988",
"table" : "ssf4_mpd",
"used_for_staging" : false
}, {
"key" : "ssf5",
"name" : "International Prognostic Score (IPS)",
"naaccr_item" : 2920,
"default" : "988",
"table" : "ssf5_npe",
"used_for_staging" : false
}, {
"key" : "clin_stage_group_direct",
"name" : "TNM Clin Stage Group",
"naaccr_item" : 970,
"default" : "99",
"table" : "stage_group_lymphoma_c_60180",
"used_for_staging" : true,
"metadata" : [ "NPCR_REQUIRED", "COC_REQUIRED", "SEER_REQUIRED" ]
}, {
"key" : "path_stage_group_direct",
"name" : "TNM Path Stage Group",
"naaccr_item" : 910,
"default" : "99",
"table" : "stage_group_lymphoma_p_48657",
"used_for_staging" : true,
"metadata" : [ "NPCR_REQUIRED", "COC_REQUIRED", "SEER_REQUIRED" ]
} ],
"outputs" : [ {
"key" : "derived_version",
"name" : "Derived Version",
"default" : "{{ctx_alg_version}}"
}, {
"key" : "clin_stage_group",
"name" : "Derived SEER Clin Stage Group",
"naaccr_item" : 3610,
"default" : "88"
}, {
"key" : "path_stage_group",
"name" : "Derived SEER Path Stage Group",
"naaccr_item" : 3605,
"default" : "88"
}, {
"key" : "combined_stage_group",
"name" : "Derived SEER Combined Stage Group",
"naaccr_item" : 3614,
"default" : "88"
}, {
"key" : "combined_t",
"name" : "Derived SEER Combined T",
"naaccr_item" : 3616,
"default" : "88"
}, {
"key" : "combined_n",
"name" : "Derived SEER Combined N",
"naaccr_item" : 3618,
"default" : "88"
}, {
"key" : "combined_m",
"name" : "Derived SEER Combined M",
"naaccr_item" : 3620,
"default" : "88"
}, {
"key" : "source_t",
"name" : "Derived SEER Combined T Source",
"naaccr_item" : 3622
}, {
"key" : "source_n",
"name" : "Derived SEER Combined N Source",
"naaccr_item" : 3624
}, {
"key" : "source_m",
"name" : "Derived SEER Combined M Source",
"naaccr_item" : 3626
} ],
"mappings" : [ {
"id" : "tnm7_stage",
"name" : "TNM 7 Stage",
"inclusion_tables" : [ {
"id" : "tnm7_inclusions_tpr",
"inputs" : [ "hist" ]
} ],
"initial_context" : [ {
"key" : "clin_stage_group",
"value" : "90"
}, {
"key" : "path_stage_group",
"value" : "90"
} ],
"tables" : [ {
"id" : "lymphoma_stage_group_detailed_35045",
"input_mapping" : [ {
"from" : "clin_stage_group_direct",
"to" : "stage_group_in"
} ],
"output_mapping" : [ {
"from" : "stage",
"to" : "clin_stage_group"
} ],
"inputs" : [ "clin_stage_group_direct", "ssf2" ],
"outputs" : [ "clin_stage_group" ]
}, {
"id" : "lymphoma_path_stage_group_detailed_88547",
"input_mapping" : [ {
"from" : "clin_stage_group_direct",
"to" : "clin_stage_group_in"
}, {
"from" : "path_stage_group_direct",
"to" : "path_stage_group_in"
} ],
"output_mapping" : [ {
"from" : "stage",
"to" : "path_stage_group"
} ],
"inputs" : [ "clin_stage_group_direct", "ssf2", "path_stage_group_direct" ],
"outputs" : [ "path_stage_group" ]
} ]
}, {
"id" : "combined_stage",
"name" : "Combined Stage",
"inclusion_tables" : [ {
"id" : "tnm7_inclusions_tpr",
"inputs" : [ "hist" ]
} ],
"initial_context" : [ {
"key" : "combined_stage_group",
"value" : "90"
} ],
"tables" : [ {
"id" : "combined_stage_group_for_lymphoma_19552",
"input_mapping" : [ {
"from" : "clin_stage_group",
"to" : "clin_stage_group_in"
}, {
"from" : "path_stage_group",
"to" : "path_stage_group_in"
} ],
"inputs" : [ "clin_stage_group", "path_stage_group" ],
"outputs" : [ "combined_stage_group" ]
} ]
} ],
"involved_tables" : [ "ssf2_kpg", "combined_stage_group_for_lymphoma_19552", "tnm7_inclusions_tpr", "schema_selection_lymphoma", "ssf5_npe", "lymphoma_stage_group_detailed_35045", "lymphoma_path_stage_group_detailed_88547", "stage_group_lymphoma_c_60180", "ssf3_lph", "primary_site", "ssf1_jpj", "histology", "stage_group_lymphoma_p_48657", "year_dx_validation", "ssf4_mpd" ],
"on_invalid_input" : "FAIL_WHEN_USED_FOR_STAGING",
"last_modified" : "2018-04-11T19:53:09.016Z"
}