edits.seer.internal.rules.IF118.xml Maven / Gradle / Ivy

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Java implemenation of the SEER edits.
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        <rule id="IF118" name="Age, Primary Site, Morph ICDO3--Adult (SEER)" tag="N0718" java-path="lines.line" category="inter-field" depends="Age_at_Diagnosis,Behavior_Code_ICD-O-3,Histologic_Type_ICD-O-3,Primary_Site,Year_of_Diagnosis">
            <expression><![CDATA[Integer ageDx = Functions.asInt(line.ageAtDiagnosis)

if (line.dateOfDiagnosisYear == null ||
     line.histologicTypeIcdO3 == null || line.behaviorCodeIcdO3 == null ||
     line.dateOfDiagnosisYear < '2001' || line.overRideAgeSiteMorph == '1' ||
     ageDx < 15)
   return true
if (ageDx < 30 &&
   (['9732','9823','9863','9875','9876','9945'].contains(line.histologicTypeIcdO3) ||
   line.primarySite == 'C609'))
   return false
if (ageDx < 20 &&
         (Functions.matches(line.primarySite, /^C(15\d|17\d|199|209|21[0-8]|239|24\d|25\d|384|50\d|54\d|559)$/) ||
         (Functions.matches(line.primarySite, /^C(18\d|339|34\d)$/) && ! Functions.between(line.histologicTypeIcdO3,'8240','8245')) ||
         (Functions.matches(line.primarySite, /^C53\d$/) && line.behaviorCodeIcdO3 == '3')))
   return false
if ((ageDx < 40 && line.primarySite == 'C619' && line.histologicTypeIcdO3 == '8140') ||
         (ageDx > 45 && line.primarySite == 'C589' && line.histologicTypeIcdO3 == '9100'))
   return false
if (Functions.matches(line.primarySite, /^C69\d$/) && Functions.between(line.histologicTypeIcdO3,'9510','9514'))
   return false
if (line.histologicTypeIcdO3 == '8960' || line.histologicTypeIcdO3 == '9946')
   return false

return true]]></expression>
            <message>Age, Primary Site, Histology conflict for Adult</message>
            <description><![CDATA[This edit is skipped if any of the following conditions are true:
  1)  Histologic Type ICD-O-3[522] is blank
  2)  Behavior Code ICD-O-3[523] is blank
  3)  Year of Diagnosis[390] < 2001
  4)  Year of Diagnosis is blank
  5)  Age < 15
  6)  Over-ride age/site/morph[1990] is 1 (review complete).

This edit and the edit Age, Primary Site, Morphology ICDO3--Pediatric
(NPCR) replace the edit Age, Primary Site, Morphology ICDO3 (SEER IF15)
for cases diagnosed on or after 01/01/2001.  There is no overlap in the
two edits.  The edit Age, Primary Site, Morphology ICDO3--Pediatric
(NPCR) is for ages 000 - 014 and this edit (Age, Primary Site,
Morphology ICDO3--Adult (SEER)) is for ages 015 and older.  The field
Over-ride Age/Site/Morph [1990] is shared by both edits and contains a "1"
when the case has been reviewed and accepted as is.


For each specified age group in the following table, the Primary
Site[400]/Morphology--Type&Behav ICD-O-3[521] combinations require review.

014 < Age < 020
   Esophagus C150-C159            | Any morphology
   Small intestine C170-C179      | Any morphology
   Colon C180-C189                | Any other than carcinoid 8240-8245
   Rectosigmoid C199              | Any morphology
   Rectum C209                    | Any morphology
   Anus, anal canal C210-C218     | Any morphology
   Gallbladder C239               | Any morphology
   Other biliary tract C240-C249  | Any morphology
   Pancreas C250-C259             | Any morphology
   Trachea C339                   | Any other than carcinoid 8240-8245
   Lung and bronchus C340-C349    | Any other than carcinoid 8240-8245
   Pleura C384                    | Any morphology
   Breast C500-C509               | Any morphology
   Uterus, NOS C559               | Any morphology
   Cervix uteri C530-C539         | Any Histologic Type ICD-O-3 with
                                    Behavior ICD-O-3 of 3 (malignant)
   Corpus uteri C540-C549         | Any morphology

014 < Age < 030
   Any site                       | Multiple Myeloma 9732
                                  | Chronic myeloid leukemia
                                     9863,9875,9876,9945
                                  | Chronic lymphocytic leukemia 9823
   Penis C609                     | Any morphology

014 < Age < 040
   Prostate C619                  | Adenocarcinoma, NOS 8140

Age > 014
   Eye C690-C699                  | Retinobastoma 9510-9514
   Any site                       | Wilms tumor 8960
                                  | Juvenile myelomonocytic leukemia 9946

Age > 045
   Placenta C589                  | Choriocarcinoma 9100]]></description>
            <history>
                <event version="SE11-001-21" user="greend" date="2007-08-02">Juvenile myelomonocytic leukemia(9946) was moved from the 014 &lt; Age &lt; 030 group to the Age &gt; 14 group.</event>
                <event version="SE11-001-23" user="greend" date="2009-01-06">Edit changed to require review if age is &lt; 040 [instead of &lt; 045], site is prostate (C619), and histology is Adenocarcinoma, NOS (8140).</event>
                <event version="SE11-001-23" user="greend" date="2009-01-07">Edit changed to accept blank year of diagnosis instead of 9 filled</event>
                <event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
                <event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
                <event version="SE24-024-04" user="kirbyk" date="2024-04-16" ref="69326">Removed several dependencies.</event>
            </history>
        </rule>