edits.seer.internal.rules.IF15_3.xml Maven / Gradle / Ivy

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Java implemenation of the SEER edits.
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        <rule id="IF15_3" name="Age, Primary Site, Morphology ICDO3 (SEER IF15)" tag="N0449" java-path="lines.line" category="inter-field" depends="Age_at_Diagnosis,Behavior_Code_ICD-O-3,Histologic_Type_ICD-O-3,Primary_Site,Year_of_Diagnosis">
            <expression><![CDATA[Integer age = Functions.asInt(line.ageAtDiagnosis)

if (line.overRideAgeSiteMorph == '1' || line.overRideAgeSiteMorph == '3' || line.histologicTypeIcdO3 == null || line.dateOfDiagnosisYear >= '2001'
|| line.dateOfDiagnosisYear == null)
    return true
if (age < 20 && (Functions.matches(line.primarySite, /^C(15\d|17\d|199|209|21[0-8]|239|24\d|25\d|384|50\d|54\d|559)$/)
        || (Functions.matches(line.primarySite, /^C18\d$/) && !Functions.between(line.histologicTypeIcdO3,'8240','8245'))
        || (Functions.matches(line.primarySite, /^C(339|34\d)$/) && !Functions.between(line.histologicTypeIcdO3,'8240','8245'))
        || (Functions.matches(line.primarySite, /^C53\d$/) && line.behaviorCodeIcdO3 == '3')))
    return false
if (age < 15 && line.behaviorCodeIcdO3 == '2' && Functions.matches(line.primarySite, /^C53\d$/))
    return false
if ((age < 15 || age > 45) && line.primarySite == 'C589' && line.histologicTypeIcdO3 == '9100')
    return false
if (age < 30 && (line.primarySite == 'C609' || ['9732','9823','9863','9875','9876','9945'].contains(line.histologicTypeIcdO3)))
    return false
if (age < 40 && line.primarySite == 'C619' && line.histologicTypeIcdO3 == '8140')
    return false
if (age > 5 && Functions.matches(line.primarySite, /^C69\d$/) && Functions.between(line.histologicTypeIcdO3, '9510', '9514'))
    return false
if (age > 14 && (line.histologicTypeIcdO3 == '8960' || line.histologicTypeIcdO3 == '9946'))
    return false
return true]]></expression>
            <message>Age, Primary Site and Morphology ICD-O-3 conflict</message>
            <description><![CDATA[This edit is skipped if any of the following conditions are true:
  1)  Histologic Type ICD-O-3[522] is blank
  2)  Over-ride Age/Site/Morph[1990] contains a '1' (review completed) or
       '3' (Reviewed: Conditions 1 and 2 above both apply)
  3)  Diagnosis year >= 2001
  4)  Diagnosis year is blank

For each specified age group in the following list, the Primary Site/Morphology combinations require review.

Age at Diagnosis < 015
  Cervix uteri C530-C539        | Any histology with in situ behavior 2
  Placenta C589                 | Choriocarcinoma 9100

Age at Diagnosis < 020
  Esophagus C150-C159           | Any morphology
  Small intestine C170-C179     | Any morphlogy
  Colon C180-C189               | Any other than carcinoid 8240-8245
  Rectosigmoid C199             | Any morphology
  Rectum C209                   | Any morphology
  Anus, anal canal C210-C218    | Any morphology
  Gallbladder C239              | Any morphology
  Other biliary tract C240-C249 | Any morphology
  Pancreas C250-C259            | Any morphology
  Trachea C339                  | Any other than carcinoid 8240-8245
  Lung and bronchus C340-C349   | Any other than carcinoid 8240-8245
  Pleura C384                   | Any morphology
  Breast C500-C509              | Any morphology
  Uterus, NOS C559              | Any morphology
  Cervix uteri C530-C539        | Any histology with malignant behavior 3
  Corpus uteri C540-C549        | Any morphology

Age at Diagnosis < 030
  Any site                      | Multiple myeloma 9732
  Any site                      | Chronic myeloid leukemia 9863, 9875,
                                  9876, 9945
  Any site                      | Chronic lymphocytic leukemia 9823
  Penis C609                    | Any morphology

Age at Diagnosis < 040
  Prostate C619                 | Adenocarcinoma, NOS 8140

Age at Diagnosis > 005
  Eye C690-C699                 | Retinoblastoma 9510-9514

Age > 014
  Any site                      | Wilms tumor 8960 or
                                |    9946

Age at Diagnosis > 045
  Placenta C589                 | Choriocarcinoma 9100]]></description>
            <history>
                <event version="SE11-001-20" user="greend" date="2005-09-21">Juvenile myelomoncytic leukema (9946) for ages &lt; 30 was removed from the group of age/histologies requiring review.</event>
                <event version="SE11-001-21" user="greend" date="2007-02-02">Edit skipped for cases diagnosed 2001+.</event>
                <event version="SE11-001-21" user="greend" date="2007-08-02">Juvenile myelomonocytic leukemia(9946) was added to the Age &gt; 14 group.</event>
                <event version="SE11-001-22" user="greend" date="2008-07-10">Edit is now bypassed if Over-ride Age/Site/Morph [1990] contains a &apos;3&apos; (Reviewed:  Conditions 1 and 2 above both apply).</event>
                <event version="SE11-001-23" user="greend" date="2009-01-06">Edit is now bypassed if year of diagnosis is blank</event>
                <event version="SE11-001-23" user="greend" date="2009-01-07">Edit changed to require review if age is &lt; 040 [instead of &lt; 045] and site is prostate (C619) and histology is Adenocarcinoma, NOS (8140).</event>
                <event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
                <event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
                <event version="SE24-024-04" user="kirbyk" date="2024-04-16" ref="69326">Removed several dependencies.</event>
            </history>
        </rule>