edits.seer.internal.rules.IF297.xml Maven / Gradle / Ivy
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Java implemenation of the SEER edits.
<rule id="IF297" name="CS Items - SEER Required - SSF 10 (CS)" tag="N2370" java-path="lines.line" category="inter-field" depends="CS_Version_Input_Current,CS_Version_Input_Original,Year_of_Diagnosis">
<expression><![CDATA[if (line.dateOfDiagnosisYear == null || (line.csVersionInputCurrent == null && line.dateOfDiagnosisYear < '2016') ||
(line.csVersionInputOriginal == null && line.dateOfDiagnosisYear < '2016') || line._csSchemaId == null)
return true
if (Functions.matches(line.registryId, /^000000156[2356]$/))
return true
if ((line.behaviorCodeIcdO3 == '0' || line.behaviorCodeIcdO3 == '1') && !['brain','intracranial_gland','cns_other'].contains(line._csSchemaId))
return true
// condition 1
if (line.dateOfDiagnosisYear >= '2004' && line.dateOfDiagnosisYear <= '2017' && line.csSiteSpecificFactor10 == null)
return false
Integer csInputOrig = Functions.asInt(line.csVersionInputOriginal)
Integer csInputCurr = Functions.asInt(line.csVersionInputCurrent)
Integer yearDx = Functions.asInt(line.dateOfDiagnosisYear)
String schemaMatch = ((List)((Map)Context.CS_SSF).get(line._csSchemaId))?.get(9)//ssf10
// R = Required, N = Not required after CSv0204
if (!['N','R'].contains(schemaMatch))
return true
// condition 2
if (yearDx > 2015 && line.csExtension == null) {
if (schemaMatch == 'R') {
if (line._csSchemaId != 'bile_ducts_intrahepat')
return line.csSiteSpecificFactor10 != '988'
}
return true
}
// condition 3
if ((yearDx >= 2014 && yearDx <= 2015) || ((yearDx == 2016 || yearDx == 2017) && line.csExtension != null) || (yearDx >= 2004 && yearDx <= 2015 && csInputOrig >= 20550)) {
if (schemaMatch == 'R' && line.csSiteSpecificFactor10 == '988')
return false
return true
}
// condition 4
if ((yearDx >= 2011 && yearDx <= 2013) || (csInputOrig >= 20001 && csInputOrig < 20550)) {
if (line.csSiteSpecificFactor10 == '988')
return false
return true
}
// condition 5
if (yearDx == 2010 || Functions.matches(line.csVersionInputOriginal, /(^0201\d\d$)/) || Functions.matches(line.csVersionInputOriginal, /(^0202\d\d$)/)) {
if (line._csSchemaId == 'bile_ducts_intrahepat')
return true
if (line.csSiteSpecificFactor10 == '988')
return false
}
// condition 6
if (yearDx > 2003 && yearDx < 2010 && csInputOrig < 20000) {
if (csInputCurr == 20510) {
if (line.csSiteSpecificFactor10 != '988')
return false
}
}
return true]]></expression>
<message>CS Site-Specific Factor 10 requirements conflict for this schema</message>
<description><![CDATA[The purpose of this edit is to verify that CS Site-Specific Factor10 is entered for the schemas required by SEER.
This edit is skipped if any of the following conditions are true:
1. CS Version Input Current is blank and year of diagnosis < 2016
2. CS Version Input Original is blank and year of diagnosis < 2016
3. Behavior Code ICD-O-3 = 0 (benign) or 1 (borderline) and
schema is not Brain, CNSOther, or IntracranialGland
4. CS schema is invalid
5. Date of Diagnosis is blank or invalid
6. Registry ID = 0000001562 (New York), 0000001563 (Massachusetts), 0000001565 (Illinois), or 0000001566 (Texas)
The logic is as follows:
1. For all schemas, if year of Diagnosis is 2004-2017, CS Site-Specific Factor10 cannot be blank.
2. If year of Diagnosis > 2015 and CS Extension is blank (CS items NOT collected ):
A. CS Site-Specific Factor 10 must not be 988 (not applicable) for the schemas in List 1, "Schemas for which CS Site-Specific Factor 10 is Required for CSv0205 by SEER"
EXCEPT for the following schema: BileDuctsIntraHepat which can be 988.
3. For cases diagnosed in 2014-2015 OR (year of Diagnosis=2016-2017 and CS Extension is not blank (CS items collected)) OR (year of diagnosis in 2004-2015 and originally coded in CSv0205):
If year of Diagnosis is 2014-2015 OR (year of Diagnosis=2016-2017 and CS Extension is not blank (CS items collected)) OR (year of diagnosis in 2004-2015 and CS Version Input Original is 020550 (originally entered in CSv0205) or higher), then CS Site-Specific Factor10 must not be 988 (not applicable) for the schemas in List 1, "Schemas for which CS Site-Specific Factor10 is Required for CSv0205 by SEER".
Note: List 2 includes the schemas for which CS Site-Specific Factor10 was required for earlier versions of CSv02, but no longer required for CSv0205. The code 988 is allowed for these particular schemas.
4. For cases diagnosed 2011-2013 OR originally coded in CSv0203-CSv0204:
If year of Diagnosis is 2011-2013 OR CS Version Input Original is greater than 020000 and less than 020550 (indicating case originally entered in CSv0200-CSv0204), then CS Site-Specific Factor10 must not be 988 for the schemas in List 3, "Schemas for which CS Site-Specific Factor10 is required for CSv0200-CSv0204 by SEER".
5.For cases diagnosed 2010 OR originally coded in CSv0201-CSv0202:
If year of Diagnosis is 2010 OR CS version Input Original is 0201xx or 0202xx:
CS Site-Specific Factor10 must not be 988 for the schemas for which CS Site-Specific Factor10 is required.
Exceptions:
1. If schema = BileDuctsIntraHepat, the edit is skipped
(Note: BileDuctsIntraHepat was not required prior to CSv0203)
6. If year of Diagnosis is 2004-2009 AND CS version Input Original is 01xxxx:
If CS Version Input Current = 020510 (not changed since conversion from CSv01 to CSv02):
CS Site-Specific Factor10 must = 988.
Note: CS Site-Specific Factor 7-24 fields were all populated
with 988 upon conversion from CSv01 to CSv02.
List 1: Schemas for which CS Site-Specific Factor10 is Required for CSv0205 by SEER
- "Required" means CS Site-Specific Factor10 cannot = 988
-----------------------------------------------------------------------------------------
BileDuctsIntraHepat
GISTPeritoneum
Hypopharynx
Nasopharynx
Oropharynx
PalateSoft
Penis
PharyngealTonsil
PharynxOther
Prostate
Testis
TongueBase
List 2: Schemas for which CS Site-Specific Factor10, although required for CSv0200-CSv0204, is no longer required as of CSv0205 and 988 is allowed
-----------------------------------------------------------------------------------------
Breast
MelanomaChoroid
MelanomaCiliaryBody
MelanomaIris
SkinEyelid
Vulva
List 3: Schemas for which CS Site-Specific Factor10 is required for CSv0200-CSv0204 by SEER
- "Required" means CS Site-Specific Factor10 cannot = 988
-----------------------------------------------------------------------------------------
BileDuctsIntraHepat (required only for cases diagnosed 2011+
or entered originally in CSv0203)
Breast
GISTPeritoneum
Hypopharynx
MelanomaChoroid
MelanomaCiliaryBody
MelanomaIris
Nasopharynx
Oropharynx
PalateSoft
Penis
PharyngealTonsil
PharynxOther
Prostate
SkinEyelid
Testis
TongueBase
Vulva]]></description>
<history>
<event version="SE12-002-01" user="murphyr" date="2010-03-02">Edit created.</event>
<event version="SE12-002-01" user="murphyr" date="2010-03-23">Changed logic. Added year of diagnosis into edit.</event>
<event version="SE12-004-01" user="murphyr" date="2011-02-15">Edit updated for CSv2 version 02.03.02.</event>
<event version="SE12-004-02" user="murphyr" date="2011-03-18" ref="66447">Refined behavior skip condition (made it not skip for certain schemas) and refactored code.</event>
<event version="SE12-006-01" user="murphyr" date="2011-12-20" ref="66578">Updated for CSv0204 versioning.</event>
<event version="SE13-010-01" user="murphyr" date="2013-07-12" ref="66904">Added blank schema skip condition.</event>
<event version="SE14-011-01" user="murphyr" date="2013-11-05" ref="66996">Updated for Csv0205.</event>
<event version="SE16-015-01" user="kirbyk" date="2016-04-06" ref="67269">Updated logic for 2016 cases.</event>
<event version="SE16-015-01" user="kirbyk" date="2016-04-13" ref="67329">Fixed error in logic for cases diagnosed in 2010.</event>
<event version="SE16-015-01" user="kirbyk" date="2016-05-04" ref="67370">Changed edit to use schema IDs instead of schema names</event>
<event version="SE16-015-01" user="kirbyk" date="2016-05-24" ref="67424">Changed edit to not force 988 when DX year is 2016+ and schema is not defined.</event>
<event version="SE16-015-07" user="kirbyk" date="2016-08-24" ref="67512">Added upper bound on CS Version Input Original for condition on CSv0203-CSv0204.</event>
<event version="SE16-016-01" user="kirbyk" date="2016-12-08" ref="67568">Updated logic to include 2017 cases that collect CS.</event>
<event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
<event version="SE18-017-01" user="kirbyk" date="2018-04-02" ref="67723">Updated logic to allow blank SSF 10 for 2018+ cases.</event>
<event version="SE18-019-03" user="beverung" date="2019-07-18" ref="68203">Added skip condition for New York.</event>
<event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
<event version="SE18-020-02" user="beverung" date="2020-03-25" ref="68292">Added skip condition for Massachusetts</event>
<event version="SE21-021-08" user="beverung" date="2021-08-18" ref="68715">Added skip condition for Illinois and Texas.</event>
<event version="SE24-024-06" user="kirbyk" date="2024-07-22" ref="69326">Removed some edit dependencies.</event>
</history>
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