edits.seer.internal.rules.IF616.xml Maven / Gradle / Ivy
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Java implemenation of the SEER edits.
<rule id="IF616" name="TNM Clin T, Clin Size, Site Spec - Ed 7 (SEER)" tag="N2238" java-path="lines.line" category="inter-field" depends="Histologic_Type_ICD-O-3,Primary_Site,Year_of_Diagnosis">
<expression><![CDATA[if (line.dateOfDiagnosisYear == null || line.dateOfDiagnosisYear < '2016' || line.typeOfReportingSource == '7' ||
line.histologicTypeIcdO3 == null || line.behaviorCodeIcdO3 == '0' || line.behaviorCodeIcdO3 == '1')
return true
//Skip condition 6, 7
if (line.tnmClinT == null || line.tnmClinT == '88' || line.tumorSizeClinical == null || line.tumorSizeClinical == '999')
return true
//Skip condition 8
if (line.tnmEditionNumber != '07' && line.tnmEditionNumber != 'U7')
return true
//Get site group code- special conditions for tumor size edit
String siteGroup = (String)((Closure)Context.AJCC7CodeLookup16).call(line)
if (siteGroup == '04A') {
if (Functions.matches(line.primarySite, /^C129|C13\d$/))
siteGroup = '04E'
}
else if (siteGroup == '17B') {
if (line.primarySite == 'C241')
siteGroup = '17D'
}
//If this site group is not in the table, pass edit (skip condition 5)
if (!(siteGroup ==~ /^00[37]|04[ADE]|08[ABCD]|13B|015|16[AB]|17[ABD]|02[45789]|03[02]|04[39]|47[AB]|05[34]$/))
return true
String clinT = line.tnmClinT
if ((clinT == 'c1' || clinT == 'c1A' || clinT == 'c1MI') && line.tumorSizeClinical == '990')
return true
Map groupMap = (Map)((Map)Context.TNM_Clin_T_Tumor_Size_Table).getOrDefault(siteGroup, [:])
if (groupMap.containsKey(clinT))
return ((List)groupMap.getOrDefault(clinT, [])).contains(Functions.asInt(line.tumorSizeClinical))
return true]]></expression>
<message>TNM Clin T and Tumor Size Clinical conflict for site/hist combination</message>
<description><![CDATA[This edit is skipped if any of the following conditions are true:
1. Year of Date of Diagnosis is less than 2016, blank (unknown), or invalid
2. Type of Reporting Source = 7 (Death Certificate Only)
3. Histologic Type ICD-O-3 is blank
4. Behavior Code ICD-O-3 = 0 (benign) or 1 (borderline)
5. Site/Histology where Clin T is not dependent on clinical tumor size
6. TNM Clin T is blank or 88
7. Tumor Size Clinical is blank or 999
8. TNM Edition Number is not = 07, U7
Skip 7 applied after determination of site/histology group
TNM Clin T may be blank. If entered, it will be edited site-specifically. A cT category entered in TNM Clin T will be compared to Tumor Size Clinical. An edit failure will be returned if the clinical tumor size is outside the range of tumor size for the listed cT category. "989", "989 millimeters or larger", is the highest possible size for Tumor Size Clinical. 990 (microscopic focus) will be accepted for c1 (c1A, c1MI) for all sites/histologies included in this edit.
The site-specific TNM Clinical T values with the corresponding clinical tumor size in millimeters are listed below. The number next to each site title indicates the respective chapter in the AJCC Cancer Staging Manual, Edition 7. The list includes only those sites/histology groups where clinical T is based on clinical tumor size. The site/histology groups are identified by site and histology in the edit Primary Site, Stage Group 2016 - Ed 7. Subdivision of the 4A site/histology group, Oropharynx and Hypopharynx, was required for this edit; the site codes for Hypopharynx were removed to site group 4E.
3. Lip and Oral Cavity
TNM T: 1 2 3
Tumor Size Clin 001-020, 990 021-040 041-989
4. Pharynx
4A. Oropharynx and Hypopharynx
Division for T category:
4A. Oropharynx only
Sites: C019, C024, C051-C052, C090-C091, C098-C099, C100, C102-C104, C108-C109
TNM T: 1 2
Tumor Size Clin 001-020, 990 021-040
4E. Hypopharynx
Sites: C129, C130-C139
TNM T: 1
Tumor Size Clin 001-020, 990
4D. Oropharynx
TNM T: 1 2
Tumor Size Clin 001-020, 990 021-040
7. Major Salivary Glands
TNM T: 1 2
Tumor Size Clin 001-020, 990 021-040
8. Thyroid Gland
8A. Thyroid: Papillary/follicular, age less than 045
8B. Thyroid: Papillary/follicular, age greater than or equal 045 but not 999
8C. Thyroid: Papillary/follicular, age equal 999 (unknown
8D. Thyroid: Medullary
TNM T: 1 1A 1B 2
Tumor Size Clin 001-020, 990 001-010, 990 011-020 021-040
13. Appendix
13B. Appendix: Carcinoid
TNM T: 1 1A 1B
Tumor Size Clin 001-020, 990 001-010, 990 011-020
15. Anus
TNM T: 1 2 3
Tumor Size Clin 001-020, 990 021-050 051-989
16. Gastrointestinal Stromal Tumor (GIST)
16A. GIST: Gastric
16B. GIST: Small Intestine
TNM T: 1 2 3 4
Tumor Size Clin 001-020, 990 021-050 051-100 101-989
17. Neuroendocrine Tumors (NET)
17A. NET: Stomach
17B. NET: Small Intestine
TNM T: 1
Tumor Size Clin 001-010, 990
17D. NET: Ampulla
TNM T: 1 2
Tumor Size Clin 001-010, 990 011-989
24. Exocrine and Endocrine Pancreas
TNM T: 1 2
Tumor Size Clin 001-020, 990 021-989
25. Lung
TNM T: 1 1A 1B 2A 2B
Tumor Size Clin 001-030, 990 001-020, 990 021-030 001-050, 990 051-070
27. Bone
TNM T: 1 2
Tumor Size Clin 001-080, 990 081-989
28. Soft Tissue Sarcoma
TNM T: 1 2
Tumor Size Clin 001-050, 990 051-989
29. Cutaneous Squamous Cell Carcinoma and other Cutaneous Carcinomas
TNM T: 1
Tumor Size Clin 001-020, 990
30. Merkel Cell Carcinoma
TNM T: 1 2 3
Tumor Size Clin 001-020, 990 021-050 051-989
32. Breast
TNM T: 1 1M 1A 1B 1C 2 3
Tumor Size Clin 001-020, 990 001-001, 990 001-005, 990 005-010 011-020 021-050 051-989
43. Kidney
TNM T: 1 1A 1B 2 2A 2B
Tumor Size Clin 001-070, 990 001-040, 990 041-070 071-989 071-100 101-989
47. Adrenal
47A. Adrenal Cortex
47B. Adrenal Cortical Carcinoma
TNM T: 1 2
Tumor Size Clin 001-050, 990 051-989
49. Conjunctiva
TNM T: 1 2
Tumor Size Clin 001-005, 990 006-989
53. Carcinoma of the Lacrimal Gland
TNM T: 1 2 3
Tumor Size Clin 001-020, 990 021-040 041-989
54. Sarcoma of the Orbit
TNM T: 1 2
Tumor Size Clin 001-015, 990 016-989]]></description>
<history>
<event version="SE16-015-01" user="kirbyk" date="2016-06-17" ref="67449">Edit created.</event>
<event version="SE16-015-07" user="kirbyk" date="2016-08-25" ref="67510">Removed code '2A' for Chapter 25.</event>
<event version="SE16-015-07" user="kirbyk" date="2016-09-13" ref="67524">Fixed logic for Clin T values not based on size.</event>
<event version="SE16-015-08" user="kirbyk" date="2016-09-26" ref="67529">Added code '2A' for Chapter 25.</event>
<event version="SE16-016-01" user="kirbyk" date="2017-01-13" ref="67587">Added skip condition for TNM Edition Number.</event>
<event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
<event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
<event version="SE24-024-06" user="kirbyk" date="2024-07-22" ref="69326">Removed some edit dependencies.</event>
</history>
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