edits.seer.internal.rules.IF177.xml Maven / Gradle / Ivy
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Java implemenation of the SEER edits.
<rule id="IF177" name="Primary Site, Laterality, CS Extension (SEER IF177)" tag="N0864" java-path="lines.line" category="inter-field" depends="CS_Extension,Histologic_Type_ICD-O-3,Primary_Site,Year_of_Diagnosis">
<expression><![CDATA[Integer site = Functions.asInt(line.primarySite.substring(1))
if (line.overRideSiteLatEod == '1' || line.histologicTypeIcdO3 == null ||
line.dateOfDiagnosisYear < '2004' || line.csExtension == null ||
(line.histologicTypeIcdO3 == '9140' || Functions.between(line.histologicTypeIcdO3,'9590','9992')) ||
((line.dateOfDiagnosisYear == '2016' || line.dateOfDiagnosisYear == '2017') && line.csExtension == null) ||
!((List)Context.Base_Sites_IF177).contains(site))
return true
if (line.laterality == '9' ||
(line.laterality == '4' && !((List)Context.Bypass_Sites_IF177).contains(site))) {
if ([471,472,491,492].contains(site))
return ! (line.csExtension >= '000' && line.csExtension <= '320')
if (Functions.between(site, 500, 509))
return ! (line.csExtension >= '000' && line.csExtension <= '100')
if (Functions.between(site, 620, 629))
return ! (line.csExtension >= '000' && line.csExtension <= '310')
if (Functions.between(site, 690, 699))
return ! (line.csExtension >= '000' && line.csExtension <= '400')
if (line.laterality == '4' && line.dateOfDiagnosisYear > '2009' &&
Functions.between(site, 340, 349) && line.csExtension >= '000' &&
line.csExtension <= '300')
return [23, 25, 26, 36, 38, 40, 41, 42, 43, 50, 51, 52, 53, 70, 75].contains(Functions.asInt(line.csMetsAtDx))
return ! (line.csExtension >= '000' && line.csExtension <= '300')
}
return true]]></expression>
<message>Lateral and CS Extension conflict (ICD-O-3)</message>
<description><![CDATA[The edit is skipped if any of the following conditions are true:
1) Over-ride Site/Lat/EOD contains a '1' (review complete)
2) Year of Diagnosis[390] < 2004 or blank
3) Histologic Type ICD-O-3 = 9140, 9590-9992
4) If Year of Diagnosis[390] = 2016-2017 and CS Extension[2810] is blank
For the purpose of this edit the following sites are considered paired organs:
C079 Parotid gland
C080 Submandibular gland
C081 Sublingual gland
C090 Tonsillar fossa
C091 Tonsillar pillar
C098-C099 Tonsil, NOS
C301 Middle ear
C310 Maxillary sinus
C312 Frontal sinus
C341-C349 Lung
C384 Pleura
C400 Long bones of upper limb, scapula and associated joints
C401 Short bones of upper limb and associated joints
C402 Long bones of lower limb and associated joints
C403 Short bones of lower limb and associated joints
C441 Skin of eyelid
C442 Skin of external ear
C446 Skin of upper limb and shoulder
C447 Skin of lower limb and hip
C471 Peripheral nerves and autonomic nervous system of upper
limb and shoulder
C472 Peripheral nerves and autonomic nervous system of lower limb and
hip
C491 Connective, subcutaneous, and other soft tissues of upper limb
and shoulder
C492 Connective, subcutaneous, and other soft tissues of lower limb
and hip
C500-C509 Breast
C569 Ovary
C570 Fallopian tube
C620-C629 Testis
C630 Epididymis
C631 Spermatic cord
C649 Kidney, NOS
C659 Renal pelvis
C669 Ureter
C690-C699 Eye
C740-C749 Adrenal gland
C754 Carotid body
If Laterality[410] = 9 (no information concerning laterality), CS Extension[2810] cannot specify in situ, localized or regional by direct extension only.
If Laterality[410] = 4 (bilateral involvement, lateral origin unknown: stated to be a single primary), CS Extension cannot specify in situ, localized or regional by direct extension only for all paired organs above except C090,C091, C098-C099, C569, C570, C649 and C692.
There is an additional exception for cases diagnosed 2010 or later:
If Primary Site = C340-C349 (lung), CS Extension may = 000-300 only if CS Mets at DX = {23, 25, 26, 36, 38, 40, 41, 42, 43, 50, 51, 52, 53, 70, 75}.
In situ or localized is coded in the CS Extension field as follows:
000-100 for sites C500-C509 (breast)
000-310 for sites C620-C629 (testis)
000-320 for sites C471 (Peripheral nerves and autonomic nervous system of upper limb and shoulder)
C472 (Peripheral nerves and autonomic nervous system of lower limb and hip)
C491 (Connective, subcutaneous, and other soft tissues of upper limb and shoulder)
C492 (Connective, subcutaneous, and other soft tissues of lower limb and hip)
000-400 for sites C690-C699 (eye)
000-300 for all other paired organ sites listed above]]></description>
<history>
<event version="SE12-002-01" user="murphyr" date="2010-01-29">The edit was modified to include C570 (fallopian tube) in the list of paired sites that are exceptions to "if Laterality is '4' (bilateral involvement, lateral origin unknown: stated to be a single primary), CS Extension cannot specify in situ or localized". Reference to 9-filled year of diagnosis removed. Hematopoietic end range code was changed from 9989 to 9992. Length of CS Extension changed from 2 to 3 characters.</event>
<event version="SE13-009-01" user="murphyr" date="2012-12-26" ref="66787">Added: 'For 2010+ cases, if Primary Site = C340-C349 (lung), CS Extension may = 000-300 only if CS Mets at DX = {23, 25, 26, 36, 38, 40, 41, 42, 43, 50, 51, 52, 53, 70, 75}.'</event>
<event version="SE16-015-01" user="kirbyk" date="2016-04-01" ref="67242">Added skip condition for DX year = 2016 when CS Extension is blank.</event>
<event version="SE16-016-01" user="kirbyk" date="2016-12-07" ref="67560">Edit is now skipped when DX year = 2017 and CS Extension is blank.</event>
<event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
<event version="SE18-018-02" user="schadega" date="2018-05-17" ref="67760">Name change.</event>
<event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
<event version="SE24-024-06" user="kirbyk" date="2024-07-03" ref="69326">Removed some edit dependencies.</event>
</history>
</rule>