edits.seer.internal.rules.IF599.xml Maven / Gradle / Ivy

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Java implemenation of the SEER edits.
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        <rule id="IF599" name="TNM Clin Descriptor, Histologies - Ed 7 (COC)" tag="N2223" java-path="lines.line" category="inter-field" depends="Behavior_Code_ICD-O-3,Histologic_Type_ICD-O-3,Primary_Site,TNM_Clin_Descriptor,Type_of_Reporting_Source,Year_of_Diagnosis">
            <expression><![CDATA[if (line.dateOfDiagnosisYear == null || line.dateOfDiagnosisYear < '2016' || line.typeOfReportingSource == '7' ||
    line.behaviorCodeIcdO3 == '0' || line.behaviorCodeIcdO3 == '1' || line.tnmClinDescriptor == null || !(Functions.matches(line.tnmClinDescriptor, /^[125]$/)))
    return true

//Ocular Adnexal Lymphoma
String hist = line.histologicTypeIcdO3
String site = line.primarySite
if (site ==~ /^C441|C69[056]$/ && ((hist >= '9590' && hist <= '9699') || (hist >= '9702' && hist <= '9738') || (hist >= '9811' && hist <= '9818') || (hist >= '9820' && hist <= '9837')))
    return true

//Primary Cutaneous Lymphoma
if (site ==~ /^C44\d|C51[01289]|C60[01289]|C632$/ && (hist == '9700' || hist == '9701'))
    return true

//Neoplasms
Integer siteInt = Functions.asInt(site?.substring(1))
if (((siteInt >= 0 && siteInt <= 419) || siteInt == 422 || siteInt == 423 || siteInt == 440 || (siteInt >= 442 && siteInt <= 689) || (siteInt >= 691 && siteInt <= 694) ||
    (siteInt >= 698 && siteInt <= 809)) && (hist == '9823' || hist == '9827' || (hist >= '9811' && hist <= '9818') || hist == '9837'))
    return true
if ((siteInt == 420 || siteInt == 421 || siteInt == 424) && ((hist >= '9811' && hist <= '9818') || hist == '9837'))
    return true

//Other
if (!(site ==~ /^C441|C69[056]$/) && ((hist >= '9590' && hist <= '9699') || (hist >= '9702' && hist <= '9727') || hist == '9735' || hist == '9737' || hist == '9738'))
    return true

return false]]></expression>
            <message>TNM Clin Descriptor, Site, Histology conflict</message>
            <description><![CDATA[This edit is skipped if any of the following conditions are true:

1. Year of Date of Diagnosis is less than 2016, blank (unknown), or invalid
2. Type of Reporting Source = 7 (Death Certificate Only)
3. Behavior Code ICD-O-3 = 0 (benign) or 1 (borderline)
4. TNM Clin Descriptor is blank
5. TNM Clin Descriptor not = 1, 2, 5


This edit verifies that TNM Clin Descriptor codes 1 [E (Extranodal, lymphomas only)], 2 [S (Spleen, lymphomas only)], and 5 [E & S (Extranodal and spleen, lymphomas only)] are coded only for lymphoma cases.

If TNM Clin Descriptor = 1, 2, 5 and case is not a lymphoma as specified below, an error is generated.

Ocular Adnexal Lymphoma:
Primary Site:
    C441, C690, C695-C696
Histologic Type ICD-O-3
    9590-9699, 9702-9738, 9811-9818, 9820-9837

Primary Cutaneous Lymphomas:
Primary Site:
     C440-C449
     C510-C512, C518-C519
     C600-C602, C608-C609, C632
Histologic Type ICD-O-3:
     9700,9701

Neoplasms manifesting as leukemia or lymphoma:

Primary Site:
     C000-C419,C422-C423,
    C440,C442-C689,
    C691-C694,C698-C809
Histologic Type ICD-O-3:
    9823,9827,9811-9818, 9837

Primary Site:
    C420,C421,C424
Histologic Type ICD-O-3:
    9811-9818, 9837

Other lymphomas:
Primary Site:
    All except C441, C690, C695-C696
Histologic Type ICD-O-3
    9590-9699, 9702-9727, 9735, 9737-9738]]></description>
            <history>
                <event version="SE16-015-01" user="kirbyk" date="2016-06-01" ref="67432">Edit created.</event>
                <event version="SE16-016-01" user="kirbyk" date="2016-12-01" ref="67547">Added more neoplasm site/hist combinations.</event>
                <event version="SE16-016-08" user="depryf" date="2017-11-22" ref="67674">Edit syntax updated to allow pre-compilation optimization; no change in behavior.</event>
                <event version="SE18-020-01" user="depryf" date="2020-02-04" ref="68281">Changed property names to align with NAACCR XML IDs.</event>
            </history>
        </rule>