edits.seer.internal.rules.IFN2803.xml Maven / Gradle / Ivy
Go to download
Show more of this group Show more artifacts with this name
Show all versions of validation-edits-seer Show documentation
Show all versions of validation-edits-seer Show documentation
Java implemenation of the SEER edits.
The newest version!
<rule id="IFN2803" name="Grade, Schema ID (NAACCR)" tag="N2803" java-path="lines.line" category="inter-field" depends="Year_of_Diagnosis">
<expression><![CDATA[if (line.dateOfDiagnosisYear == null || line.dateOfDiagnosisYear < '2018' || line.schemaId == null)
return true
if (line.gradeClinical == null && line.gradePathological == null)
return true
List validCodes = (List)((Map)Context.IFN2803_Table).get(line.schemaId)
if (validCodes == null)
return true
boolean isClinValid = line.gradeClinical == null || validCodes.contains(line.gradeClinical)
boolean isPathValid = line.gradePathological == null || validCodes.contains(line.gradePathological)
boolean isPostTxValid = line.gradePostTherapy == null || validCodes.contains(line.gradePostTherapy)
boolean isPostTxClinValid = line.gradePostTherapyClin == null || validCodes.contains(line.gradePostTherapyClin)
return isClinValid && isPathValid && isPostTxValid && isPostTxClinValid]]></expression>
<message>Grade Clin,Path,PostTX and Schema ID conflict</message>
<description><![CDATA[This edit checks that the four grade data items, Grade Clinical, Grade Pathological, Grade Post Therapy Clin (yc), and Grade Post Therapy Path (yp), are correct by Schema ID. The grade data items may be blank because they are not required before 2018. Grade Clinical and Grade Pathological are required for cases diagnosed 2018 and later. Grade Post Therapy Clin (yc) and Grade PostTherapy Path (yp) may be blank for cases diagnosed 2018 and later. Another edit, Grade Clin, Path, PostTX, Date of Diagnosis (NAACCR), checks that the grade data items are reported by diagnosis date.
The edit is skipped if any of the following conditions are true:
a. Date of diagnosis is pre-2018, blank or invalid
b. Grade Clinical and Grade Pathological are both blank
c. Schema ID is blank
The allowable values for Grade Clinical, Grade Pathological, Grade Post Therapy Clin (yc), and Grade Post Therapy Path (yp) are listed by Schema ID. The values are the same for the four grade items. The sites and histologies for each schema are listed in the edit _SYS Schema ID, Primary Site, Histology, Behavior (NAACCR).
00060 Cervical Lymph Nodes and Unknown Primary Tumors of the Head and Neck
Grade: 9
00071 Lip
00072 Tongue Anterior
00073 Gum
00074 Floor of Mouth
00075 Palate Hard
00076 Buccal Mucosa
00077 Mouth Other
Grade: 1, 2, 3, 9
00080 Major Salivary Glands
Grade: A, B, C, D, 9
00090 Nasopharynx
Grade: A, B, C, D, 9
00100 HPV-Mediated (p16+) Oropharyngeal Cancer
Grade: A, B, C, D, 9
00111 Oropharynx (p16-)
00112 Hypopharynx
Grade: 1, 2, 3, 4, 9
00118 Pharynx Other
Grade: A, B, C, D, 9
00119 Middle Ear
Grade: A, B, C, D, 9
00121 Maxillary Sinus
00122 Nasal Cavity and Ethmoid Sinus
Grade: 1, 2, 3, 9
00128 Sinus Other
Grade: A, B, C, D, 9
00130 Larynx Other
00131 Larynx Supraglottic
00132 Larynx Glottic
00133 Larynx Subglottic
Grade: 1, 2, 3, 9
00140 Mucosal Melanoma of the Head and Neck
Grade: A, B, C, D, 9
00150 Cutaneous Carcinoma of the Head and Neck
Grade: 1, 2, 3, 4, 9
000161 Esophagus and Esophagogastric Junction (Squamous)
Grade: 1, 2, 3, 9
00169 Esophagus and GE Junction (Adenocarcinoma and Other)
Grade: 1, 2, 3, 9
00170 Stomach
Grade: 1, 2, 3, 9
00180 Small Intestine
Grade: 1, 2, 3, 4, 9
00190 Appendix [8th: 2018-2022]
Grade: 1, 2, 3, 9
09190 Appendix [V9: 2023+]
Grade: 1, 2, 3, 9
00200 Colon and Rectum
Grade: 1, 2, 3, 4, 9
00210 Anus [8th: 2018-2022]
Grade: 1, 2, 3, 4, L, H, 9
09210 Anus [V9: 2023+]
Grade: 1, 2, 3, 4, L, H, 9
00220 Liver
Grade: 1, 2, 3, 4, 9
00230 Bile Ducts Intrahepatic
Grade: 1, 2, 3, 9
00241 Gallbladder
00242 Cystic Duct
Grade: 1, 2, 3, 9
00250 Bile Ducts Perihilar
Grade: 1, 2, 3, 9
00260 Bile Ducts Distal
Grade: 1, 2, 3, 9
00270 Ampulla of Vater
Grade: 1, 2, 3, 9
00278 Biliary Other
Grade: A, B, C, D, 9
00280 Pancreas
Grade: 1, 2, 3, 9
00288 Digestive Other
Grade: A, B, C, D, 9
00290 NET Stomach [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09290 NET Stomach [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00301 NET Duodenum [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09301 NET Duodenum [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00302 NET Ampulla of Vater [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09302 NET Ampulla of Vater [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00310 NET Jejunum and Ileum [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09310 NET Jejunum and Ileum [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00320 NET Appendix [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09320 NET Appendix [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00330 NET Colon and Rectum [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09330 NET Colon and Rectum [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00340 NET Pancreas [8th: 2018-2023]
Grade: 1, 2, 3, A, B, C, D, 9
09340 NET Pancreas [V9: 2024+]
Grade: 1, 2, 3, A, B, C, D, 9
00350 Thymus
Grade: A, B, C, D, 9
00358 Trachea
Grade: A, B, C, D, 9
00360 Lung
Grade: 1, 2, 3, 4, 9
00370 Pleura
Grade: 1, 2, 3, 4, 9
00378 Respiratory Other
Grade: A, B, C, D, 9
00381 Bone Appendicular
00382 Bone Spine
00383 Bone Pelvis
Grade: 1, 2, 3, H, 9
00400 Soft Tissues Head and Neck
Grade: 1, 2, 3, A, B, C, D, H, 9
00410 Soft Tissue Trunk and Extremities
Grade: 1, 2, 3, A, B, C, D, H, 9
00421 Soft Tissue Abdomen and Thorax
00422 Heart, Mediastinum, Pleura
Grade: 1, 2, 3, A, B, C, D, H, 9
00430 Gastrointestinal Stromal Tumor (GIST)
Grade: L, H, A, B, C, D, 9
00440 Retroperitoneum
Grade: 1, 2, 3, A, B, C, D, H, 9
00450 Soft Tissue Rare
Grade: 1, 2, 3, A, B, C, D, H, 9
00458 Kaposi Sarcoma
Grade: 1, 2, 3, A, B, C, D, H, 9
00459 Soft Tissue Other
Grade: 1, 2, 3, A, B, C, D, H, 9
00460 Merkel Cell Skin
Grade: A, B, C, D, 9
00470 Melanoma Skin
Grade: A, B, C, D, 9
00478 Skin Other
Grade: A, B, C, D, 9
00480 Breast
Grade: 1, 2, 3, L, M, H, A, B, C, D, 9
00500 Vulva [8th: 2018-2023]
Grade: 1, 2, 3, 9
09500 Vulva [V9: 2024+]
Grade: 1, 2, 3, 9
00510 Vagina
Grade: 1, 2, 3, 9
00520 Cervix Uteri [8th: 2018-2020]
Grade: 1, 2, 3, 9
09520 Cervix Uteri [V9: 2021+]
Grade: 1, 2, 3, 9
00528 Cervix Sarcoma [2021+]
Grade: 1, 2, 3, 9
00530 Corpus Carcinoma and Carcinosarcoma
Grade: 1, 2, 3, 9
00541 Corpus Sarcoma
Grade: 1, 2, 3, 9
00542 Corpus Adenosarcoma
Grade: 1, 2, 3, L, H, S, 9
00551 Ovary
00552 Primary Peritoneal Carcinoma
00553 Fallopian Tube
Grade: 1, 2, 3, B, L, H, 9
00558 Adnexa Uterine Other
Grade: A, B, C, D, 9
00559 Genital Female Other
Grade: A, B, C, D, 9
00560 Placenta
Grade: A, B, C, D, 9
00570 Penis
Grade: 1, 2, 3, 9
00580 Prostate
Grade: 1, 2, 3, 4, 5, A, B, C, D, E, 9
00590 Testis
Grade: A, B, C, D, 9
00598 Genital Male Other
Grade: A, B, C, D, 9
00600 Kidney Parenchyma
Grade: 1, 2, 3, 4, A, B, C, D, 9
00610 Kidney Renal Pelvis
Grade: 1, 2, 3, L, H, 9
00620 Urinary Bladder
Grade: 1, 2, 3, L, H, 9
00631 Urethra
00633 Urethra-Prostatic
Grade: 1, 2, 3, L, H, 9
00638 Urinary Other
Grade: A, B, C, D, 9
00640 Skin Eyelid
Grade: 1, 2, 3, 4, 9
00650 Conjunctiva
Grade: 1, 2, 3, 4, 9
00660 Melanoma Conjunctiva
Grade: A, B, C, D, 9
00671 Melanoma Iris
00672 Melanoma Choroid and Ciliary Body
Grade: 1, 2, 3, A, B, C, D, 9
00680 Retinoblastoma
Grade: 1, 2, 3, 4, A, B, C, D, 9
00690 Lacrimal Gland
Grade: 1, 2, 3, 4, 9
00698 Lacrimal Sac
Grade: A, B, C, D, 9
00700 Orbital Sarcoma
Grade: 1, 2, 3, A, B, C, D, H, 9
00710 Lymphoma Ocular Adnexa
Grade: 1, 2, 3, 4, 9
00718 Eye Other
Grade: A, B, C, D, 9
00721 Brain and Spinal Cord [8th: 2018-2022]
00722 CNS Other [8th: 2018-2022]
00723 Intracranial Gland [8th: 2018-2022]
Grade: 1, 2, 3, 4, L, H, A, B, C, D, 9
09721 Brain and Spinal Cord Other [V9: 2023+]
09722 CNS Other [V9: 2023+]
09723 Intracranial Gland [V9: 2023+]
09724 Brain and Spinal Cord Medulloblastoma [V9: 2023+]
Grade: 1, 2, 3, 4, L, H, A, B, C, D, 9
00730 Thyroid
Grade: A, B, C, D, 9
00740 Thyroid Medullary
Grade: A, B, C, D, 9
00750 Parathyroid
Grade: L, H, A, B, C, D, 9
00760 Adrenal Gland
Grade: L, H, M, A, B, C, D, 9
00770 NET Adrenal
Grade: A, B, C, D, 9
00778 Endocrine Other
Grade: A, B, C, D, 9
00790 Lymphoma
00795 Lymphoma-CLL/SLL
Grade: 8
00811 Mycosis Fungoides
00812 Primary Cutaneous Lymphomas (excluding Mycosis Fungoides)
Grade: 8
00821 Plasma Cell Myeloma
00822 Plasma Cell Disorder
Grade: 8
00830 HemeRetic
Grade: 8
99999 Ill-Defined Other
Grade: A, B, C, D, 9]]></description>
<history>
<event version="SE18-018-03" user="kirbyk" date="2018-07-13" ref="67946">Edit created.</event>
<event version="SE18-018-04" user="kirbyk" date="2018-08-08" ref="67985">Updated names for schemas 00821 and 00822 in description.</event>
<event version="SE18-018-05" user="kirbyk" date="2018-08-17" ref="68020">Changed schema name for 00150.</event>
<event version="SE18-018-06" user="kirbyk" date="2018-08-24" ref="68026">Changed error message.</event>
<event version="SE22-022-01" user="secristc" date="2022-01-13" ref="68832">Updated names for schemas 00450 and 00520 in the description, added 00459, 00528, and 09520 to the list</event>
<event version="SE23-023-01" user="secristc" date="2023-02-06" ref="69130">Updated grade codes for multiple schemas and added schema IDs 09190, 09210, and 09721-4 </event>
<event version="SE24-024-01" user="kirbyk" date="2024-03-13" ref="69404">Added new schema IDs; added Grade Post Therapy Clin.</event>
</history>
</rule>