edits.seer.internal.rules.IFN5016.xml Maven / Gradle / Ivy

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Java implemenation of the SEER edits.
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        <rule id="IFN5016" name="RX Summ--Surg Prim Site 03-2022, Primary Site, 2018 (SEER)" tag="N5016" java-path="lines.line" category="inter-field" depends="Primary_Site,Year_of_Diagnosis">
            <expression><![CDATA[if (line.dateOfDiagnosisYear == null || line.dateOfDiagnosisYear < '2018' || line.dateOfDiagnosisYear > '2022' || line.primarySite == null || line.rxSummSurgPrimSite == null)
    return true
boolean primarySiteCondition = Functions.matches(line.primarySite, /^C42[0134]|C76[0-8]|C809$/)
boolean histologyCondition = Functions.matches(line.histologicTypeIcdO3, /^9(7(27|32|4[129]|6[1-9]|[789]\d)|8(0\d|2[06]|3[1-4]|[4-9]\d)|9([0-8]\d|9[0-3]))$/)
if (!primarySiteCondition && histologyCondition && line.dateOfDiagnosisYear <= '2021')
    return true

if (line.typeOfReportingSource == '7' && line.rxSummSurgPrimSite == '99')
    return true

if (primarySiteCondition)
    return line.rxSummSurgPrimSite == '98'

Integer siteInt = Functions.asInt(line.primarySite.substring(1, 4))
Map<Integer, Integer> schemaIdMap = (Map<Integer, Integer>)Context.IFN5016_Primary_Site_GroupCode_Table
Integer groupCode = schemaIdMap.get(siteInt)
if (groupCode != null) {
    if (groupCode == 30 && line.rxSummSurgPrimSite == '41' && !line.primarySite.startsWith('C69'))
        return false

    Map<Integer, List<String>> groupCodeMap = line.dateOfDiagnosisYear > '2021' ?
        (Map<Integer, List<String>>)Context.IFN5016_GroupCode_Table_22 :
        (Map<Integer, List<String>>)Context.IFN5016_GroupCode_Table_18

    if (groupCodeMap.containsKey(groupCode))
        return groupCodeMap.get(groupCode).contains(line.rxSummSurgPrimSite)
}

return false]]></expression>
            <message>Conflict among RX Summ--Surg Prim Site 03-2022, Primary Site, and Schema ID.</message>
            <description><![CDATA[This edit verifies that RX Summ--Surg Prim Site 03-2022 is coded appropriately by
Primary Site.

1. This edit is skipped for any of the following:
    a. Diagnosis date before 2018 or after 2022, blank (unknown), or invalid.
    b. Primary Site is blank
    c. RX Summ--Surg Prim Site 03-2022 is blank
    d. Histology = 9727, 9732, 9741-9742, 9749, 9761-9809, 9820, 9826, 9831-9834,
        9840-9993, diagnosis date = 2018-2021, and primary site not = C420, C421, C423,
        C424, C760-C768, C809.

1. This edit checks valid surgery codes by Primary Site code. The 
valid RX Summ--Surg Prim Site 03-2022 codes are specified in the SEER Program Coding
Manual for 2021.

2. If Type of Reporting Source = 7 (Death Certificate Only), RX Summ--Surg Prim Site 03-2022
    may = 99 for any site.

3. If Primary Site group is All Other Sites (group 30 in the table used for this 
edit) and RX Summ--Surg Prim Site 03-2022 = 41 (enucleation for eye surgery only), then
Primary Site must = C690-C699 (multiple possible Schema IDs).

4.    Surgery codes for Primary Site C420, C421, C423, C424, C760-C768, C809,
   must = 98.  

5. Surgery codes for all other Primary Site codes must = codes as 
   specified in the SEER Program Coding Manual.]]></description>
            <history>
                <event version="SE18-019-02" user="kirbyk" date="2019-05-02" ref="68154">Edit created.</event>
                <event version="SE18-019-03" user="kirbyk" date="2019-08-05" ref="68212">Updated valid codes for schema IDs 00821, 00822, 00830.</event>
                <event version="SE18-019-07" user="beverung" date="2019-10-25" ref="68265">Updated valid codes for schema IDs 00760 and 00770.</event>
                <event version="SE18-020-02" user="beverung" date="2020-03-27" ref="68313">Added C637-C639 to table for schema 00421 code 30.</event>
                <event version="SE18-020-05" user="kirbyk" date="2020-08-05" ref="68453">Updated DX year condition; added histology conditions.</event>
                <event version="SE21-021-03" user="smithm" date="2021-03-05" ref="68584">Add logic for 2021+ cases.</event>
                <event version="SE21-021-04" user="kirbyk" date="2021-04-16" ref="68646">Updated edit tables for 2021+ cases.</event>
                <event version="SE21-021-04" user="kirbyk" date="2021-05-12" ref="68656">Updated valid values for 2019-2020 cases.</event>
                <event version="SE22-022-01" user="beverung" date="2022-01-20" ref="68897">Update edit name to match new NAACCR translated edit.</event>
                <event version="SE22-022-01" user="beverung" date="2022-03-10" ref="68917">Update logic for 2022.</event>
                <event version="SE22-022-02" user="kirbyk" date="2022-03-18" ref="68918">Added Primary Sites C740-C749 to the edit table for code 30.</event>
                <event version="SE22-022-05" user="beverung" date="2022-05-19" ref="68994">Added skip condition for Primary Site, Histology, and DX Year.</event>
                <event version="SE23-023-01" user="secristc" date="2023-01-24" ref="69093">Add new skip condition for DX year > 2022.</event>
                <event version="SE23-023-02" user="cooki" date="2023-05-03" ref="69267">Updated description for step 1.</event>
            </history>
        </rule>